Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 2.5e-40 168.7 110 100.0
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 8.4e-20 100.5 67 71.6
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 5.4e-19 97.8 67 71.6
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 3.9e-17 91.7 63 68.3
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 2.5e-16 89.0 67 62.7
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 7.3e-16 87.4 67 62.7
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 7.3e-16 87.4 67 61.2
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 2.1e-15 85.9 67 58.2
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 2.8e-15 85.5 67 61.2
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 6.2e-15 84.3 67 58.2
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 8.1e-15 84.0 67 59.7
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 8.1e-15 84.0 61 67.2
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 1.1e-14 83.6 67 56.7
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 1.4e-14 83.2 67 59.7
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 2.4e-14 82.4 67 56.7
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 4.0e-14 81.6 67 56.7
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 5.2e-14 81.3 67 58.2
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 5.2e-14 81.3 67 58.2
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 5.2e-14 81.3 67 58.2
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 5.2e-14 81.3 67 56.7
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 6.9e-14 80.9 63 63.5
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 6.9e-14 80.9 67 55.2
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 1.2e-13 80.1 67 56.7
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 1.5e-13 79.7 67 53.7
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.5e-13 79.7 67 56.7
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.5e-13 79.7 67 56.7
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.0e-13 79.3 67 53.7
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 2.0e-13 79.3 67 56.7
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.0e-13 79.3 67 55.2
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 2.6e-13 79.0 67 55.2
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 2.6e-13 79.0 67 55.2
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 2.6e-13 79.0 67 56.7
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 2.6e-13 79.0 61 63.9
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 3.4e-13 78.6 67 59.7
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 3.4e-13 78.6 67 55.2
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.4e-13 78.2 62 61.3
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 4.4e-13 78.2 62 61.3
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 5.8e-13 77.8 67 53.7
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 5.8e-13 77.8 67 58.2
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 5.8e-13 77.8 60 61.7
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 5.8e-13 77.8 67 59.7
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 7.6e-13 77.4 67 55.2
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 7.6e-13 77.4 62 61.3
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 7.6e-13 77.4 62 61.3
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 7.6e-13 77.4 67 55.2
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 7.6e-13 77.4 67 55.2
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 9.9e-13 77.0 65 58.5
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.3e-12 76.6 62 59.7
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.3e-12 76.6 72 56.9
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 1.7e-12 76.3 67 55.2
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 2.2e-12 75.9 67 62.7
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 2.9e-12 75.5 67 55.2
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.9e-12 75.5 53 67.9
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.9e-12 75.5 53 67.9
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.9e-12 74.7 63 65.1
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.9e-12 74.7 67 62.7
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.9e-12 74.7 67 62.7
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 4.9e-12 74.7 62 58.1
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 8.4e-12 73.9 60 56.7
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.1e-11 73.6 62 64.5
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.1e-11 73.6 65 55.4
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.4e-11 73.2 60 66.7
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.4e-11 73.2 67 53.7
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 1.9e-11 72.8 60 56.7
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 1.9e-11 72.8 60 58.3
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.4e-11 72.4 64 60.9
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 3.2e-11 72.0 74 50.0
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 4.2e-11 71.6 67 52.2
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 4.2e-11 71.6 67 59.7
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 5.4e-11 71.2 67 49.3
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 5.4e-11 71.2 74 50.0
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 5.4e-11 71.2 70 54.3
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 7.1e-11 70.9 72 50.0
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.1e-11 70.9 60 65.0
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 7.1e-11 70.9 63 50.8
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 9.3e-11 70.5 68 51.5
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.2e-10 70.1 67 49.3
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.2e-10 70.1 72 50.0
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.7e-10 68.9 53 60.4
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 3.5e-10 68.6 57 59.6
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 4.6e-10 68.2 61 52.5
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 4.6e-10 68.2 52 57.7
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 7.8e-10 67.4 68 52.9
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.0e-09 67.0 60 61.7
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.3e-09 66.6 67 47.8
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 1.3e-09 66.6 64 51.6
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 2.3e-09 65.9 63 54.0
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 2.3e-09 65.9 53 58.5
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.3e-09 65.9 42 66.7
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 3.0e-09 65.5 67 50.7
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 3.9e-09 65.1 68 52.9
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 3.9e-09 65.1 63 47.6
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 3.9e-09 65.1 68 50.0
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.1e-09 64.7 55 60.0
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 6.6e-09 64.3 67 55.2
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 8.7e-09 63.9 67 53.7
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 1.1e-08 63.5 68 48.5
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 1.5e-08 63.2 65 49.2
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 2.5e-08 62.4 64 46.9
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 1.3e-07 60.1 68 48.5
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 1.6e-07 59.7 67 44.8
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 1.6e-07 59.7 60 46.7
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 2.1e-07 59.3 65 43.1
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 2.8e-07 58.9 59 49.2
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 8.1e-07 57.4 68 48.5
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 2.4e-06 55.8 47 51.1
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 2.4e-06 55.8 47 51.1
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 9.0e-06 53.9 67 46.3


User provided reference genes

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