Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 4.8e-65 251.1 137 100.0
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 1.3e-46 189.9 133 79.7
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 1.1e-45 186.8 115 85.2
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 2.8e-41 172.2 127 74.8
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 2.8e-41 172.2 113 80.5
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 4.8e-41 171.4 131 71.0
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 4.8e-41 171.4 114 78.1
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 6.3e-41 171.0 113 79.6
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 1.4e-40 169.9 125 72.0
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 1.5e-39 166.4 136 69.1
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 1.5e-39 166.4 113 75.2
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 1.5e-39 166.4 113 74.3
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 2.0e-39 166.0 111 77.5
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 2.0e-39 166.0 131 67.9
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 2.6e-39 165.6 115 74.8
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 5.9e-39 164.5 111 76.6
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 1.0e-38 163.7 111 77.5
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 1.3e-38 163.3 120 70.8
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 1.3e-38 163.3 134 67.2
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 3.8e-38 161.8 116 70.7
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 5.0e-38 161.4 115 73.0
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 6.5e-38 161.0 133 65.4
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 6.5e-38 161.0 122 70.5
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 6.5e-38 161.0 122 70.5
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 6.5e-38 161.0 127 67.7
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 8.5e-38 160.6 136 66.2
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 1.1e-37 160.2 113 72.6
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 1.4e-37 159.8 124 67.7
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 1.9e-37 159.5 116 69.8
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 2.5e-37 159.1 131 67.9
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 2.5e-37 159.1 131 64.9
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 3.2e-37 158.7 133 65.4
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 4.2e-37 158.3 133 65.4
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 5.5e-37 157.9 127 64.6
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 5.5e-37 157.9 134 64.9
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 1.2e-36 156.8 140 61.4
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 1.2e-36 156.8 140 61.4
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 1.2e-36 156.8 140 61.4
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 1.6e-36 156.4 123 66.7
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 1.6e-36 156.4 132 65.2
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 2.1e-36 156.0 117 69.2
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 2.1e-36 156.0 135 64.4
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 2.1e-36 156.0 129 65.1
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 2.1e-36 156.0 134 62.7
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 2.1e-36 156.0 115 68.7
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 2.7e-36 155.6 117 69.2
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 2.7e-36 155.6 113 70.8
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 4.7e-36 154.8 118 68.6
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 4.7e-36 154.8 118 68.6
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 7.9e-36 154.1 117 68.4
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 7.9e-36 154.1 111 72.1
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 1.0e-35 153.7 119 66.4
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 1.0e-35 153.7 130 63.8
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.0e-35 153.7 154 59.7
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.0e-35 153.7 154 59.7
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 1.4e-35 153.3 128 65.6
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 1.4e-35 153.3 128 65.6
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 1.4e-35 153.3 119 66.4
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 1.8e-35 152.9 130 63.8
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 3.0e-35 152.1 127 63.0
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 3.0e-35 152.1 131 64.1
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 3.9e-35 151.8 111 72.1
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 6.7e-35 151.0 107 72.9
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 8.8e-35 150.6 130 62.3
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 8.8e-35 150.6 130 62.3
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 1.1e-34 150.2 114 69.3
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 7.4e-34 147.5 117 65.8
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 9.7e-34 147.1 121 64.5
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 1.3e-33 146.7 109 67.9
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 2.8e-33 145.6 131 61.8
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 2.8e-33 145.6 120 63.3
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 8.2e-33 144.1 131 61.1
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 4.1e-32 141.7 109 66.1
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 5.3e-32 141.4 111 69.4
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 1.5e-31 139.8 109 64.2
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 1.5e-31 139.8 131 58.8
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 2.0e-31 139.4 102 68.6
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 7.7e-31 137.5 91 75.8
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 7.7e-31 137.5 91 75.8
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 1.3e-30 136.7 105 68.6
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 1.3e-30 136.7 129 59.7
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 2.2e-30 136.0 91 74.7
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 2.2e-30 136.0 130 56.9
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 6.5e-30 134.4 92 73.9
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 2.5e-29 132.5 91 73.6
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 3.2e-29 132.1 107 65.4
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 4.2e-29 131.7 110 64.5
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 1.6e-28 129.8 115 58.3
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 4.7e-28 128.3 109 66.1
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 4.7e-28 128.3 109 66.1
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 4.7e-28 128.3 77 84.4
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 4.7e-28 128.3 109 63.3
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 8.0e-28 127.5 96 67.7
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 8.0e-28 127.5 118 58.5
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 1.4e-27 126.7 108 63.0
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 1.8e-27 126.3 125 58.4
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 1.8e-27 126.3 110 60.0
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 3.0e-27 125.6 120 54.2
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 8.8e-27 124.0 99 66.7
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 7.4e-26 120.9 121 56.2
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 9.7e-26 120.6 101 60.4
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 2.4e-24 115.9 76 80.3
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 4.5e-23 111.7 86 62.8
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 2.2e-22 109.4 93 60.2
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 5.0e-22 108.2 94 62.8
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 6.5e-22 107.8 160 43.1
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 8.5e-22 107.5 143 49.7
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 1.1e-21 107.1 93 62.4
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 1.5e-21 106.7 105 54.3
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 4.2e-21 105.1 129 48.8
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 1.2e-20 103.6 76 68.4
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 5.2e-19 98.2 68 67.6
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 7.5e-18 94.4 97 47.4
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 8.3e-17 90.9 60 80.0
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 1.1e-16 90.5 71 66.2
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 4.1e-16 88.6 84 52.4
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 2.0e-15 86.3 77 62.3
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 4.5e-15 85.1 73 64.4
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 4.5e-15 85.1 69 65.2
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 3.8e-14 82.0 60 71.7
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 6.1e-12 74.7 56 64.3
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 8.8e-11 70.9 73 50.7
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 8.8e-11 70.9 73 50.7
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 2.6e-10 69.3 68 51.5
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 1.3e-09 67.0 66 56.1
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 1.7e-09 66.6 66 56.1
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 3.7e-09 65.5 46 65.2
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 3.1e-08 62.4 70 52.9
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 2.7e-07 59.3 51 58.8
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 2.7e-07 59.3 51 58.8
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 1.0e-06 57.4 51 56.9
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 2.3e-06 56.2 51 56.9
COL.COLO4_34468 Corchorus olitorius HOM05D005411 ORTHO05D006463 5.0e-06 55.1 39 74.4
Cpa.g.sc537.1 Carica papaya HOM05D005411 ORTHO05D006463 6.6e-06 54.7 94 40.4


User provided reference genes

Program Settings