Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G5338 Erigeron canadensis HOM05D004457 ORTHO05D005282 1.5e-101 372.9 184 100.0
Lsat_1_v5_gn_8_3720 Lactuca sativa HOM05D004457 ORTHO05D005282 6.6e-70 267.7 166 80.7
HanXRQChr04g0105271 Helianthus annuus HOM05D004457 ORTHO05D005282 8.1e-68 260.8 167 78.4
Manes.09G128300 Manihot esculenta HOM05D004457 ORTHO05D005282 9.6e-61 237.3 165 70.3
Thecc.05G219000 Theobroma cacao HOM05D004457 ORTHO05D005282 3.6e-60 235.3 165 72.7
Actinidia34324 Actinidia chinensis HOM05D004457 ORTHO05D005282 1.4e-59 233.4 165 70.9
CSS0031792 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 2.4e-59 232.6 165 70.9
CSS0048555 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 2.4e-59 232.6 165 70.9
Sabra13G0073500 Salix brachista HOM05D004457 ORTHO05D005282 5.3e-59 231.5 165 70.3
Actinidia08758 Actinidia chinensis HOM05D004457 ORTHO05D005282 6.9e-59 231.1 165 69.7
vmacro06531 Vaccinium macrocarpon HOM05D004457 ORTHO05D005282 9.0e-59 230.7 177 66.1
Potri.013G079101 Populus trichocarpa HOM05D004457 ORTHO05D005282 2.6e-58 229.2 165 70.3
Potri.013G079201 Populus trichocarpa HOM05D004457 ORTHO05D005282 2.6e-58 229.2 165 70.9
Cpa.g.sc43.116 Carica papaya HOM05D004457 ORTHO05D005282 3.4e-58 228.8 165 68.5
TWI60G0869 Tripterygium wilfordii HOM05D004457 ORTHO05D005282 4.4e-58 228.4 165 67.9
Lj1A1034G49 Lonicera japonica HOM05D004457 ORTHO05D005282 2.9e-57 225.7 165 67.9
Cc02_g00170 Coffea canephora HOM05D004457 ORTHO05D005282 3.8e-57 225.3 165 66.7
CSS0045385 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 1.1e-56 223.8 165 67.3
Eucgr.K00073 Eucalyptus grandis HOM05D004457 ORTHO05D005282 1.4e-56 223.4 168 69.6
CSS0037309 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 2.4e-56 222.6 165 67.3
COL.COLO4_15192 Corchorus olitorius HOM05D004457 ORTHO05D005282 2.1e-55 219.5 190 62.6
Gohir.D03G053500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 4.6e-55 218.4 165 67.3
Atru.chr12.1918 Acer truncatum HOM05D004457 ORTHO05D005282 6.0e-55 218.0 165 67.9
Cfa016064 Carpinus fangiana HOM05D004457 ORTHO05D005282 1.0e-54 217.2 165 66.1
Gorai.003G055700 Gossypium raimondii HOM05D004457 ORTHO05D005282 1.0e-54 217.2 165 66.7
Haze_00385 Corylus avellana HOM05D004457 ORTHO05D005282 1.3e-54 216.9 165 67.3
Gohir.A08G221660 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.3e-54 216.9 165 65.5
Gohir.A02G127500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.7e-54 216.5 165 67.3
Nn6g33553 Nelumbo nucifera HOM05D004457 ORTHO05D005282 2.3e-54 216.1 165 64.8
Prupe.2G328100 Prunus persica HOM05D004457 ORTHO05D005282 3.0e-54 215.7 165 67.3
Gorai.004G256600 Gossypium raimondii HOM05D004457 ORTHO05D005282 3.9e-54 215.3 165 64.8
Lj3A885T46 Lonicera japonica HOM05D004457 ORTHO05D005282 5.1e-54 214.9 168 63.7
Gohir.D08G241200 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.1e-53 213.8 165 64.2
Ciclev10021193m.g Citrus clementina HOM05D004457 ORTHO05D005282 1.9e-53 213.0 164 66.5
GSVIVG01024347001 Vitis vinifera HOM05D004457 ORTHO05D005282 1.9e-53 213.0 165 63.6
Hma1.2p1_0419F.1_g149440 Hydrangea macrophylla HOM05D004457 ORTHO05D005282 2.5e-53 212.6 165 62.4
CiPaw.06G035200 Carya illinoinensis HOM05D004457 ORTHO05D005282 3.3e-53 212.2 165 66.7
Nitab4.5_0004530g0100 Nicotiana tabacum HOM05D004457 ORTHO05D005282 5.6e-53 211.5 164 62.8
CAN.G1131.28 Capsicum annuum HOM05D004457 ORTHO05D005282 7.3e-53 211.1 164 64.0
CiPaw.05G214800 Carya illinoinensis HOM05D004457 ORTHO05D005282 9.6e-53 210.7 172 64.5
RcHm_v2.0_Chr1g0384491 Rosa chinensis HOM05D004457 ORTHO05D005282 1.6e-52 209.9 165 63.0
Hund21100 Selenicereus undatus HOM05D004457 ORTHO05D005282 4.8e-52 208.4 165 64.2
TAR375G0461 Trochodendron aralioides HOM05D004457 ORTHO05D005282 1.4e-51 206.8 165 63.6
Oeu062823.1 Olea europaea HOM05D004457 ORTHO05D005282 1.8e-51 206.5 166 63.3
Solyc03g097180.3 Solanum lycopersicum HOM05D004457 ORTHO05D005282 1.8e-51 206.5 164 61.6
EL10Ac3g05054 Beta vulgaris HOM05D004457 ORTHO05D005282 2.4e-51 206.1 165 63.6
PGR142G0056 Punica granatum HOM05D004457 ORTHO05D005282 2.4e-51 206.1 165 63.0
Nitab4.5_0000021g0740 Nicotiana tabacum HOM05D004457 ORTHO05D005282 1.5e-50 203.4 164 61.6
Rhsim03G0223200 Rhododendron simsii HOM05D004457 ORTHO05D005282 2.0e-50 203.0 221 49.8
MD07G1310300 Malus domestica HOM05D004457 ORTHO05D005282 3.4e-50 202.2 165 63.0
Sed0007489 Sechium edule HOM05D004457 ORTHO05D005282 3.4e-50 202.2 164 61.0
Peaxi162Scf00516g00661 Petunia axillaris HOM05D004457 ORTHO05D005282 5.8e-50 201.4 164 61.6
Glyma.11G009300 Glycine max HOM05D004457 ORTHO05D005282 7.6e-50 201.1 165 62.4
PGSC0003DMG400003162 Solanum tuberosum HOM05D004457 ORTHO05D005282 9.9e-50 200.7 164 60.4
MD01G1237700 Malus domestica HOM05D004457 ORTHO05D005282 2.2e-49 199.5 165 62.4
FvH4_7g34140 Fragaria vesca HOM05D004457 ORTHO05D005282 2.9e-49 199.1 165 60.6
AUR62028201 Chenopodium quinoa HOM05D004457 ORTHO05D005282 6.4e-49 198.0 165 61.2
Glyma.01G233500 Glycine max HOM05D004457 ORTHO05D005282 6.4e-49 198.0 165 61.8
arahy.Tifrunner.gnm1.ann1.9FAL4E Arachis hypogaea HOM05D004457 ORTHO05D005282 8.4e-49 197.6 165 61.2
arahy.Tifrunner.gnm1.ann1.R5JYMV Arachis hypogaea HOM05D004457 ORTHO05D005282 8.4e-49 197.6 165 61.2
THA.LOC104805712 Tarenaya hassleriana HOM05D004457 ORTHO05D005282 2.4e-48 196.1 166 62.0
LjContig00222g0016666 Lotus japonicus HOM05D004457 ORTHO05D005282 7.1e-48 194.5 165 60.0
CiPaw.06G035100 Carya illinoinensis HOM05D004457 ORTHO05D005282 9.3e-48 194.1 165 60.0
AT1G65020 Arabidopsis thaliana HOM05D004457 ORTHO05D005282 1.2e-47 193.7 164 61.0
CARHR056470 Cardamine hirsuta HOM05D004457 ORTHO05D005282 1.2e-47 193.7 164 61.6
Phvul.002G041000 Phaseolus vulgaris HOM05D004457 ORTHO05D005282 1.2e-47 193.7 165 60.0
Lalb_Chr09g0320121 Lupinus albus HOM05D004457 ORTHO05D005282 1.6e-47 193.4 186 55.4
Carub.0002s1019 Capsella rubella HOM05D004457 ORTHO05D005282 2.1e-47 193.0 164 61.6
MSTRG.26922 Avicennia marina HOM05D004457 ORTHO05D005282 2.7e-47 192.6 166 56.0
MSTRG.8 Avicennia marina HOM05D004457 ORTHO05D005282 3.5e-47 192.2 166 57.8
PSO063G5530 Papaver somniferum HOM05D004457 ORTHO05D005282 3.5e-47 192.2 165 60.6
PSO782G5560 Papaver somniferum HOM05D004457 ORTHO05D005282 7.9e-47 191.0 165 60.6
AL2G19640 Arabidopsis lyrata HOM05D004457 ORTHO05D005282 1.0e-46 190.7 164 59.8
FAN10G1543 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.3e-46 190.3 178 55.6
Aa31LG2G2220 Aethionema arabicum HOM05D004457 ORTHO05D005282 1.8e-46 189.9 184 55.4
Aqoxy3G02297 Aquilegia oxysepala HOM05D004457 ORTHO05D005282 2.3e-46 189.5 165 59.4
CsaV3_3G050090 Cucumis sativus L. HOM05D004457 ORTHO05D005282 3.9e-46 188.7 164 57.9
SalBow2G1767 Salvia bowleyana HOM05D004457 ORTHO05D005282 3.9e-46 188.7 166 57.2
Thhalv10022467m.g Eutrema salsugineum HOM05D004457 ORTHO05D005282 5.1e-46 188.3 186 56.5
Psat2g189240 Pisum sativum HOM05D004457 ORTHO05D005282 1.1e-45 187.2 165 59.4
BolC2t08250H Brassica oleracea HOM05D004457 ORTHO05D005282 1.5e-45 186.8 164 59.1
BraA07t30901Z Brassica rapa HOM05D004457 ORTHO05D005282 1.9e-45 186.4 164 59.8
Sp5g19410 Schrenkiella parvula HOM05D004457 ORTHO05D005282 2.5e-45 186.0 164 58.5
Sed0022448 Sechium edule HOM05D004457 ORTHO05D005282 3.3e-45 185.7 165 58.8
VMungo1215G3184 Vigna mungo HOM05D004457 ORTHO05D005282 3.3e-45 185.7 165 58.2
BraA02t06354Z Brassica rapa HOM05D004457 ORTHO05D005282 7.4e-45 184.5 164 58.5
TPR.G37899 Trifolium pratense HOM05D004457 ORTHO05D005282 7.4e-45 184.5 165 60.0
Oeu015511.1 Olea europaea HOM05D004457 ORTHO05D005282 9.6e-45 184.1 165 57.0
SalBow4G0893 Salvia bowleyana HOM05D004457 ORTHO05D005282 9.6e-45 184.1 182 54.9
SalBow4G0372 Salvia bowleyana HOM05D004457 ORTHO05D005282 1.3e-44 183.7 165 58.2
unitig_90.g27538 Utricularia gibba HOM05D004457 ORTHO05D005282 1.6e-44 183.3 166 56.6
Migut.F00082 Erythranthe guttata HOM05D004457 ORTHO05D005282 2.1e-44 183.0 166 56.0
SGA_v2.0_scaffold50G18449 Striga asiatica HOM05D004457 ORTHO05D005282 2.1e-44 183.0 202 50.5
Ca_24434_v3 Cicer arietinum L. HOM05D004457 ORTHO05D005282 2.8e-44 182.6 165 59.4
Sc13g0010930 Simmondsia chinensis HOM05D004457 ORTHO05D005282 4.8e-44 181.8 165 58.8
C06p38960 Brassica napus HOM05D004457 ORTHO05D005282 6.2e-44 181.4 164 58.5
BolC6t38988H Brassica oleracea HOM05D004457 ORTHO05D005282 6.2e-44 181.4 164 58.5
CsaV3_2G036630 Cucumis sativus L. HOM05D004457 ORTHO05D005282 8.1e-44 181.0 165 58.2
Medtr5g007360 Medicago truncatula HOM05D004457 ORTHO05D005282 8.1e-44 181.0 165 58.2
ClCG09G017170 Citrullus lanatus HOM05D004457 ORTHO05D005282 1.1e-43 180.6 165 57.6
FAN03G1923 Fragaria x ananassa HOM05D004457 ORTHO05D005282 2.4e-43 179.5 144 63.2
MELO3C021859.2 Cucumis melo HOM05D004457 ORTHO05D005282 3.1e-43 179.1 165 57.6
SGA_v2.0_scaffold44G16903 Striga asiatica HOM05D004457 ORTHO05D005282 1.2e-42 177.2 166 53.6
CiPaw.06G035000 Carya illinoinensis HOM05D004457 ORTHO05D005282 6.5e-41 171.4 165 57.6
A02p12980 Brassica napus HOM05D004457 ORTHO05D005282 1.4e-40 170.2 190 50.5
HPP92_001524 Vanilla planifolia HOM05D004457 ORTHO05D005282 1.9e-40 169.9 167 49.7
C02p21100 Brassica napus HOM05D004457 ORTHO05D005282 5.5e-40 168.3 190 50.0
Zm00001eb024890 Zea mays HOM05D004457 ORTHO05D005282 5.5e-40 168.3 166 51.2
A07p32750 Brassica napus HOM05D004457 ORTHO05D005282 7.1e-40 167.9 145 61.4
CDE02G1044 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 1.2e-39 167.2 186 46.8
BcaB05g25319 Brassica carinata HOM05D004457 ORTHO05D005282 1.6e-39 166.8 165 55.8
PSO541G4777 Papaver somniferum HOM05D004457 ORTHO05D005282 6.0e-39 164.9 171 52.0
Dinv29138 Davidia involucrata HOM05D004457 ORTHO05D005282 1.0e-38 164.1 115 74.8
ClCG09G013130 Citrullus lanatus HOM05D004457 ORTHO05D005282 6.7e-38 161.4 146 57.5
PSO675G5198 Papaver somniferum HOM05D004457 ORTHO05D005282 1.4e-35 153.7 171 49.7
FAN28G1138 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.5e-34 150.2 142 55.6
ATR0665G122 Amborella trichopoda HOM05D004457 ORTHO05D005282 2.6e-34 149.4 165 45.5
Peaxi162Scf00133g00612 Petunia axillaris HOM05D004457 ORTHO05D005282 3.4e-34 149.1 165 53.3
Sopen03g027920 Solanum pennellii HOM05D004457 ORTHO05D005282 4.5e-34 148.7 117 65.8
Cfa016063 Carpinus fangiana HOM05D004457 ORTHO05D005282 4.2e-32 142.1 167 47.9
Nitab4.5_0000338g0060 Nicotiana tabacum HOM05D004457 ORTHO05D005282 9.3e-32 141.0 138 58.0
Nitab4.5_0004268g0020 Nicotiana tabacum HOM05D004457 ORTHO05D005282 3.5e-31 139.0 137 54.7
Actinidia28413 Actinidia chinensis HOM05D004457 ORTHO05D005282 2.3e-30 136.3 101 65.3
Duzib106G1483 Durio zibethinus HOM05D004457 ORTHO05D005282 2.3e-30 136.3 183 46.4
Cfa016062 Carpinus fangiana HOM05D004457 ORTHO05D005282 8.7e-30 134.4 173 45.1
FAN01G1413 Fragaria x ananassa HOM05D004457 ORTHO05D005282 4.1e-27 125.6 167 46.7
SEGI_39651 Sequoiadendron giganteum HOM05D004457 ORTHO05D005282 4.1e-27 125.6 167 40.7
Haze_00386 Corylus avellana HOM05D004457 ORTHO05D005282 5.0e-25 118.6 160 43.1
FAN25G0067 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.0e-22 110.9 125 55.2
QL09p022526 Quercus lobata HOM05D004457 ORTHO05D005282 1.4e-22 110.5 90 60.0
DCAR_020421 Daucus carota HOM05D004457 ORTHO05D005282 2.0e-21 106.7 81 66.7
AUR62002084 Chenopodium quinoa HOM05D004457 ORTHO05D005282 4.3e-21 105.5 82 67.1
Hund09804 Selenicereus undatus HOM05D004457 ORTHO05D005282 7.4e-21 104.8 163 39.3
Pp3c11_5580 Physcomitrium patens HOM05D004457 ORTHO05D005282 9.4e-16 87.8 156 37.2
Mapoly0043s0014 Marchantia polymorpha HOM05D004457 ORTHO05D005282 4.7e-15 85.5 183 31.1
Nitab4.5_0000845g0010 Nicotiana tabacum HOM05D004457 ORTHO05D005282 4.7e-15 85.5 119 46.2
SMO364G0318 Selaginella moellendorffii HOM05D004457 ORTHO05D005282 1.5e-13 80.5 122 32.8
Gohir.A08G102425 Gossypium hirsutum HOM05D004457 ORTHO05D005282 9.7e-13 77.8 65 58.5
AagrBONN_evm.TU.Sc2ySwM_228.2639 Anthoceros agrestis HOM05D004457 ORTHO05D005282 2.8e-12 76.3 120 31.7
Gohir.A08G097750 Gossypium hirsutum HOM05D004457 ORTHO05D005282 6.3e-12 75.1 86 47.7
QL09p022513 Quercus lobata HOM05D004457 ORTHO05D005282 9.1e-11 71.2 57 66.7
MELO3C003309.2 Cucumis melo HOM05D004457 ORTHO05D005282 2.7e-07 59.7 56 55.4
Pp3c10_23490 Physcomitrium patens HOM05D004457 ORTHO05D005282 3.6e-07 59.3 124 28.2


User provided reference genes

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