Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 1.0e-226 789.6 378 100.0
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 2.0e-201 705.7 378 89.9
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 2.6e-190 668.7 378 83.6
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 3.2e-180 635.2 378 80.7
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 8.8e-178 627.1 378 79.1
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 2.0e-174 615.9 378 76.2
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 4.5e-174 614.8 378 75.7
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 3.8e-173 611.7 378 76.5
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 4.7e-171 604.7 376 76.9
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 6.1e-171 604.4 379 78.1
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 1.4e-170 603.2 378 76.5
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 1.4e-170 603.2 374 77.8
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 2.3e-170 602.4 334 86.5
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 5.2e-170 601.3 378 76.5
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 6.8e-170 600.9 378 76.5
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 3.4e-169 598.6 378 75.9
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 7.5e-169 597.4 378 75.1
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 9.8e-169 597.0 378 75.9
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 1.3e-168 596.7 378 76.7
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 1.7e-168 596.3 378 75.7
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 2.8e-168 595.5 378 74.3
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 3.7e-168 595.1 378 75.9
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 4.9e-168 594.7 378 75.9
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 6.3e-168 594.3 387 74.2
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 1.8e-167 592.8 378 76.5
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 2.4e-167 592.4 387 73.9
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 4.1e-167 591.7 378 75.4
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 4.1e-167 591.7 375 76.0
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 4.1e-167 591.7 378 75.4
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 7.0e-167 590.9 378 74.9
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 7.0e-167 590.9 378 75.4
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 9.2e-167 590.5 375 75.7
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 1.6e-166 589.7 378 73.3
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 4.5e-166 588.2 378 73.8
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 5.9e-166 587.8 378 74.9
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 5.9e-166 587.8 378 74.9
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 5.9e-166 587.8 388 74.7
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 7.7e-166 587.4 378 74.1
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 7.7e-166 587.4 378 73.0
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 1.0e-165 587.0 378 73.3
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 1.3e-165 586.6 378 75.1
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 2.3e-165 585.9 463 64.6
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 2.9e-165 585.5 378 74.6
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 3.8e-165 585.1 378 73.8
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 5.0e-165 584.7 378 74.6
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 5.0e-165 584.7 378 74.6
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 6.6e-165 584.3 397 72.5
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 6.6e-165 584.3 378 74.9
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 8.6e-165 583.9 378 73.5
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 8.6e-165 583.9 378 74.1
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.9e-164 582.8 378 73.5
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 1.9e-164 582.8 378 74.3
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 1.2e-163 580.1 378 73.8
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 1.2e-163 580.1 379 73.1
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 2.1e-163 579.3 375 74.4
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 1.0e-162 577.0 378 73.3
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 3.0e-162 575.5 378 73.0
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 3.0e-162 575.5 378 73.0
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 2.0e-161 572.8 378 73.3
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 5.7e-161 571.2 378 73.5
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 2.2e-160 569.3 370 73.8
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 3.5e-158 562.0 442 63.3
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 1.0e-157 560.5 379 74.1
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 1.7e-157 559.7 378 73.0
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 1.1e-156 557.0 492 60.4
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 9.5e-156 553.9 378 72.0
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 2.4e-151 539.3 404 67.8
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 4.1e-151 538.5 378 69.6
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 2.5e-148 529.3 378 66.9
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 2.1e-147 526.2 375 66.1
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 2.8e-147 525.8 377 69.2
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 6.8e-146 521.2 378 68.0
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 3.4e-145 518.8 375 67.7
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 6.4e-144 514.6 334 74.9
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 4.4e-137 491.9 379 66.2
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 7.6e-137 491.1 385 65.5
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 8.6e-133 477.6 378 65.1
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 6.9e-130 468.0 346 67.6
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 1.9e-127 459.9 287 75.6
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 6.0e-126 454.9 299 75.3
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 2.5e-124 449.5 298 72.5
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 9.6e-124 447.6 333 66.1
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 4.8e-123 445.3 294 71.1
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 1.4e-122 443.7 299 69.6
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 4.9e-120 435.3 272 75.7
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 9.3e-119 431.0 317 65.9
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 2.1e-99 366.7 372 48.4
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 4.8e-99 365.5 333 57.7
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 1.8e-98 363.6 238 73.1
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 3.8e-96 355.9 371 48.5
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 1.6e-94 350.5 379 48.0
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 1.6e-91 340.5 370 48.6
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 4.2e-79 299.3 203 71.4
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.1e-78 297.0 232 62.5
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 2.8e-67 260.0 169 71.6
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 8.8e-53 211.8 129 79.1
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 1.5e-52 211.1 393 34.9
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 1.1e-50 204.9 384 36.2
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 1.4e-45 188.0 229 46.3
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 2.3e-37 160.6 114 71.9
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 1.1e-34 151.8 81 81.5
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.4e-34 150.6 91 80.2
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 4.1e-34 149.8 362 29.3
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 7.0e-34 149.1 100 74.0
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 4.7e-30 136.3 377 31.3
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 7.5e-28 129.0 109 57.8
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-26 125.2 143 44.1
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 5.1e-24 116.3 125 48.8
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 5.1e-24 116.3 83 71.1
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 2.2e-19 100.9 60 80.0
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 6.4e-19 99.4 86 61.6
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 1.7e-16 91.3 73 56.2
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 1.9e-15 87.8 45 80.0
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 7.3e-15 85.9 45 86.7
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 3.1e-13 80.5 46 69.6
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 2.9e-11 73.9 42 76.2
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.6e-06 58.2 35 77.1


User provided reference genes

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