Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G5110 Erigeron canadensis HOM05D005452 ORTHO05D006618 2.0e-50 202.2 109 100.0
HanXRQChr12g0371911 Helianthus annuus HOM05D005452 ORTHO05D006618 3.2e-40 168.3 109 84.4
Lsat_1_v5_gn_4_85301 Lactuca sativa HOM05D005452 ORTHO05D006618 2.1e-39 165.6 106 87.7
Lsat_1_v5_gn_8_152800 Lactuca sativa HOM05D005452 ORTHO05D006618 8.8e-38 160.2 106 84.9
Dinv15209 Davidia involucrata HOM05D005452 ORTHO05D006618 1.2e-29 133.3 107 65.4
DCAR_003344 Daucus carota HOM05D005452 ORTHO05D006618 2.0e-29 132.5 106 67.0
CSS0031935 Camellia sinensis var. sinensis HOM05D005452 ORTHO05D006618 2.2e-28 129.0 107 63.6
Solyc10g054060.2 Solanum lycopersicum HOM05D005452 ORTHO05D006618 3.1e-27 125.2 102 63.7
Oeu056705.1 Olea europaea HOM05D005452 ORTHO05D006618 4.1e-27 124.8 106 62.3
Sopen10g023920 Solanum pennellii HOM05D005452 ORTHO05D006618 4.1e-27 124.8 101 64.4
Lj3C54T6 Lonicera japonica HOM05D005452 ORTHO05D006618 5.4e-27 124.4 107 61.7
AUR62005503 Chenopodium quinoa HOM05D005452 ORTHO05D006618 7.0e-27 124.0 92 68.5
AUR62024237 Chenopodium quinoa HOM05D005452 ORTHO05D006618 9.1e-27 123.6 106 64.2
COL.COLO4_23485 Corchorus olitorius HOM05D005452 ORTHO05D006618 9.1e-27 123.6 106 61.3
PGR102G3216 Punica granatum HOM05D005452 ORTHO05D006618 9.1e-27 123.6 79 75.9
Hund06040 Selenicereus undatus HOM05D005452 ORTHO05D006618 1.2e-26 123.2 105 63.8
GSVIVG01003295001 Vitis vinifera HOM05D005452 ORTHO05D006618 2.0e-26 122.5 107 62.6
Actinidia01359 Actinidia chinensis HOM05D005452 ORTHO05D006618 2.7e-26 122.1 107 62.6
Hund25399 Selenicereus undatus HOM05D005452 ORTHO05D006618 3.5e-26 121.7 87 72.4
Nitab4.5_0000524g0050 Nicotiana tabacum HOM05D005452 ORTHO05D006618 5.9e-26 120.9 107 63.6
Sc04g0009650 Simmondsia chinensis HOM05D005452 ORTHO05D006618 5.9e-26 120.9 103 63.1
Actinidia08127 Actinidia chinensis HOM05D005452 ORTHO05D006618 1.7e-25 119.4 110 61.8
CANSAT11G1680 Cannabis sativa HOM05D005452 ORTHO05D006618 1.7e-25 119.4 107 60.7
Nitab4.5_0002322g0150 Nicotiana tabacum HOM05D001410 ORTHO05D006618 1.7e-25 119.4 108 62.0
RcHm_v2.0_Chr7g0208311 Rosa chinensis HOM05D005452 ORTHO05D006618 1.7e-25 119.4 107 63.6
vmacro06707 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 1.7e-25 119.4 109 63.3
Hma1.2p1_0079F.1_g041110 Hydrangea macrophylla HOM05D005452 ORTHO05D006618 2.3e-25 119.0 92 67.4
Nitab4.5_0004217g0010 Nicotiana tabacum HOM05D001410 ORTHO05D006618 2.3e-25 119.0 106 62.3
Prupe.5G046400 Prunus persica HOM05D005452 ORTHO05D006618 2.3e-25 119.0 111 62.2
Rhsim12G0039600 Rhododendron simsii HOM05D005452 ORTHO05D006618 2.9e-25 118.6 99 64.6
SalBow6G0301 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.9e-25 118.6 84 75.0
EL10Ac5g10516 Beta vulgaris HOM05D005452 ORTHO05D006618 3.8e-25 118.2 93 62.4
Ciclev10033123m.g Citrus clementina HOM05D005452 ORTHO05D006618 5.0e-25 117.9 80 72.5
TAR371G0357 Trochodendron aralioides HOM05D005452 ORTHO05D006618 5.0e-25 117.9 110 60.9
TAR629G2696 Trochodendron aralioides HOM05D005452 ORTHO05D006618 5.0e-25 117.9 110 61.8
Duzib268G1139 Durio zibethinus HOM05D005452 ORTHO05D006618 6.5e-25 117.5 109 56.9
Sed0011581 Sechium edule HOM05D005452 ORTHO05D006618 6.5e-25 117.5 107 61.7
CiPaw.05G172100 Carya illinoinensis HOM05D005452 ORTHO05D006618 8.6e-25 117.1 115 57.4
FvH4_5g21170 Fragaria vesca HOM05D005452 ORTHO05D006618 8.6e-25 117.1 104 62.5
Thecc.02G263300 Theobroma cacao HOM05D005452 ORTHO05D006618 8.6e-25 117.1 109 57.8
ClCG10G012250 Citrullus lanatus HOM05D005452 ORTHO05D006618 1.1e-24 116.7 79 70.9
SalBow6G4340 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.5e-24 116.3 88 71.6
FAN13G0782 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.9e-24 115.9 104 62.5
Lalb_Chr03g0040661 Lupinus albus HOM05D005452 ORTHO05D006618 1.9e-24 115.9 80 73.8
SalBow6G0335 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.5e-24 115.5 82 75.6
SalBow6G1267 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.5e-24 115.5 82 75.6
SalBow6G2856 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.5e-24 115.5 82 75.6
SalBow6G4107 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.5e-24 115.5 82 75.6
SalBow6G4977 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.5e-24 115.5 82 75.6
Gorai.009G233700 Gossypium raimondii HOM05D005452 ORTHO05D006618 3.3e-24 115.2 109 59.6
Gohir.A05G223400 Gossypium hirsutum HOM05D005452 ORTHO05D006618 4.2e-24 114.8 109 58.7
Migut.K00615 Erythranthe guttata HOM05D005452 ORTHO05D006618 5.5e-24 114.4 88 71.6
SGA_v2.0_scaffold293G47424 Striga asiatica HOM05D005452 ORTHO05D006618 5.5e-24 114.4 81 72.8
CiPaw.04G056800 Carya illinoinensis HOM05D005452 ORTHO05D006618 7.2e-24 114.0 79 72.2
TWI18G1019 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 7.2e-24 114.0 109 59.6
Lalb_Chr01g0021741 Lupinus albus HOM05D005452 ORTHO05D006618 9.5e-24 113.6 105 60.0
SalBow6G3385 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.2e-23 113.2 87 70.1
SalBow6G6484 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.2e-23 113.2 92 69.6
unitig_22.g6942 Utricularia gibba HOM05D005452 ORTHO05D006618 1.2e-23 113.2 86 68.6
CsaV3_3G032030 Cucumis sativus L. HOM05D005452 ORTHO05D006618 2.1e-23 112.5 107 58.9
QL03p056962 Quercus lobata HOM05D005452 ORTHO05D006618 2.1e-23 112.5 77 74.0
VMungo1080G1735 Vigna mungo HOM05D005452 ORTHO05D006618 2.1e-23 112.5 98 62.2
CAN.G128.103 Capsicum annuum HOM05D005452 ORTHO05D000001 2.8e-23 112.1 108 59.3
Lj5g0027337 Lotus japonicus HOM05D005452 ORTHO05D006618 2.8e-23 112.1 112 57.1
TWI36G1628 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 2.8e-23 112.1 109 57.8
Manes.13G021600 Manihot esculenta HOM05D005452 ORTHO05D006618 3.6e-23 111.7 108 60.2
FAN04G1087 Fragaria x ananassa HOM05D005452 ORTHO05D006618 4.7e-23 111.3 101 61.4
THA.LOC104805276 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 4.7e-23 111.3 91 65.9
MELO3C030920.2 Cucumis melo HOM05D005452 ORTHO05D006618 6.1e-23 110.9 78 70.5
Lj4g0014743 Lotus japonicus HOM05D005452 ORTHO05D006618 6.1e-23 110.9 112 56.2
Psat5g193600 Pisum sativum HOM05D005452 ORTHO05D006618 6.1e-23 110.9 107 59.8
THA.LOC104824009 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 6.1e-23 110.9 91 64.8
Haze_12270 Corylus avellana HOM05D004112 ORTHO05D004739 8.0e-23 110.5 109 54.1
SGA_v2.0_scaffold12G06036 Striga asiatica HOM05D005452 ORTHO05D006618 8.0e-23 110.5 82 72.0
FAN08G2976 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.0e-22 110.2 101 60.4
Eucgr.B03269 Eucalyptus grandis HOM05D005452 ORTHO05D006618 1.8e-22 109.4 79 69.6
FAN18G0628 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.8e-22 109.4 101 60.4
TPR.G32914 Trifolium pratense HOM05D005452 ORTHO05D006618 1.8e-22 109.4 112 56.2
Atru.chr11.2163 Acer truncatum HOM05D005452 ORTHO05D006618 5.2e-22 107.8 113 54.0
AL5G15130 Arabidopsis lyrata HOM05D005452 ORTHO05D006618 5.2e-22 107.8 89 61.8
MD09G1284200 Malus domestica HOM05D005452 ORTHO05D006618 6.8e-22 107.5 79 69.6
Peaxi162Scf00067g00116 Petunia axillaris HOM05D005452 ORTHO05D006618 6.8e-22 107.5 104 57.7
VMungo1383G1569 Vigna mungo HOM05D005452 ORTHO05D006618 6.8e-22 107.5 98 60.2
AT3G26360 Arabidopsis thaliana HOM05D005452 ORTHO05D006618 8.9e-22 107.1 92 63.0
Glyma.18G249300 Glycine max HOM05D005452 ORTHO05D006618 8.9e-22 107.1 111 53.2
Peaxi162Scf00128g00434 Petunia axillaris HOM05D005452 ORTHO05D006618 8.9e-22 107.1 99 59.6
Sp2g15510 Schrenkiella parvula HOM05D005452 ORTHO05D006618 8.9e-22 107.1 92 63.0
MD06G1040200 Malus domestica HOM05D005452 ORTHO05D006618 1.2e-21 106.7 110 54.5
Cfa009234 Carpinus fangiana HOM05D005452 ORTHO05D006618 2.0e-21 105.9 106 53.8
Thhalv10005184m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 2.0e-21 105.9 91 62.6
Glyma.09G244200 Glycine max HOM05D005452 ORTHO05D006618 2.0e-21 105.9 94 59.6
Medtr3g464760 Medicago truncatula HOM05D005452 ORTHO05D006618 2.0e-21 105.9 112 53.6
Nn1g08774 Nelumbo nucifera HOM05D005452 ORTHO05D006618 2.0e-21 105.9 108 51.9
Thhalv10005186m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 2.6e-21 105.5 91 62.6
A06p42060 Brassica napus HOM05D005452 ORTHO05D006618 3.4e-21 105.1 90 63.3
C07p35420 Brassica napus HOM05D005452 ORTHO05D006618 3.4e-21 105.1 90 63.3
BraA06t27123Z Brassica rapa HOM05D005452 ORTHO05D006618 3.4e-21 105.1 90 63.3
Ca_14963_v3 Cicer arietinum L. HOM05D005452 ORTHO05D006618 3.4e-21 105.1 112 53.6
BcaB07g30231 Brassica carinata HOM05D005452 ORTHO05D006618 4.4e-21 104.8 103 55.3
BcaC03g17336 Brassica carinata HOM05D005452 ORTHO05D006618 4.4e-21 104.8 103 55.3
BolC7t44066H Brassica oleracea HOM05D005452 ORTHO05D006618 4.4e-21 104.8 90 63.3
Carub.0005s0428 Capsella rubella HOM05D005452 ORTHO05D006618 4.4e-21 104.8 103 55.3
Phvul.008G048300 Phaseolus vulgaris HOM05D005452 ORTHO05D006618 5.7e-21 104.4 98 57.1
Oeu049174.1 Olea europaea HOM05D005452 ORTHO05D006618 9.8e-21 103.6 106 54.7
CDE10G1265 Ceratophyllum demersum HOM05D005452 ORTHO05D006618 1.3e-20 103.2 109 46.8
Cpa.g.c31584 Carica papaya HOM05D005452 ORTHO05D006618 1.7e-20 102.8 109 56.0
ATR0691G211 Amborella trichopoda HOM05D005452 ORTHO05D006618 2.2e-20 102.4 82 62.2
A02p34530 Brassica napus HOM05D005452 ORTHO05D006618 2.2e-20 102.4 102 54.9
C02p52850 Brassica napus HOM05D005452 ORTHO05D006618 2.2e-20 102.4 102 54.9
BraA02t08463Z Brassica rapa HOM05D005452 ORTHO05D006618 2.2e-20 102.4 102 54.9
Aqoxy3G01257 Aquilegia oxysepala HOM05D005452 ORTHO05D006618 3.7e-20 101.7 109 53.2
Aa31LG2G6150 Aethionema arabicum HOM05D005452 ORTHO05D006618 4.9e-20 101.3 100 58.0
CARHR147370 Cardamine hirsuta HOM05D005452 ORTHO05D006618 4.9e-20 101.3 103 55.3
Gohir.D05G226100 Gossypium hirsutum HOM05D005452 ORTHO05D006618 4.9e-20 101.3 76 68.4
Lj4g0021307 Lotus japonicus HOM05D005452 ORTHO05D006618 6.3e-20 100.9 94 57.4
MD02G1109400 Malus domestica HOM05D005452 ORTHO05D006618 1.1e-19 100.1 78 65.4
PSO017G6805 Papaver somniferum HOM05D005452 ORTHO05D006618 1.8e-19 99.4 111 55.0
PSO210G2974 Papaver somniferum HOM05D005452 ORTHO05D006618 2.4e-19 99.0 110 53.6
BolC2t11364H Brassica oleracea HOM05D005452 ORTHO05D006618 4.1e-19 98.2 102 52.9
Potri.010G048600 Populus trichocarpa HOM05D005452 ORTHO05D006618 7.0e-19 97.4 80 62.5
Sabra10G0020400 Salix brachista HOM05D004112 ORTHO05D004739 2.7e-18 95.5 79 62.0
MBI15_g04991_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 4.5e-18 94.7 123 44.7
SHI03748 Sapria himalayana HOM05D005452 ORTHO05D006618 4.5e-18 94.7 78 60.3
Cc01_g03580 Coffea canephora HOM05D005452 ORTHO05D006618 5.9e-18 94.4 105 50.5
SalBow6G5661 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.3e-17 93.2 74 67.6
HPP92_017381 Vanilla planifolia HOM05D005452 ORTHO05D006618 2.9e-17 92.0 78 60.3
MD04G1159200 Malus domestica HOM05D005452 ORTHO05D006618 9.5e-16 87.0 78 62.8
vmacro01118 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 2.1e-15 85.9 87 59.8
SEGI_39778 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 2.8e-15 85.5 78 56.4
MD12G1125700 Malus domestica HOM05D005452 ORTHO05D006618 4.7e-15 84.7 78 61.5
SEGI_27388 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 4.7e-15 84.7 78 56.4
Zm00001eb053730 Zea mays HOM05D005452 ORTHO05D006618 6.1e-15 84.3 92 46.7
Zm00001eb217020 Zea mays HOM05D005452 ORTHO05D006618 8.0e-15 84.0 92 45.7
MBI15_g11303_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 1.7e-12 76.3 84 51.2
Os03g0694700 Oryza sativa ssp. japonica HOM05D005452 ORTHO05D006618 2.2e-12 75.9 82 50.0
Medtr3g450960 Medicago truncatula HOM05D005452 ORTHO05D006618 7.8e-10 67.4 57 63.2
unitig_8.g2920 Utricularia gibba HOM05D005452 ORTHO05D006618 1.3e-09 66.6 53 67.9
Zm00001eb217070 Zea mays HOM05D000876 ORTHO05D000285 1.1e-08 63.5 91 41.8
SalBow6G2133 Salvia bowleyana HOM05D009895 ORTHO05D006618 1.5e-08 63.2 53 60.4
SalBow6G0426 Salvia bowleyana HOM05D005452 ORTHO05D006618 3.6e-07 58.5 48 64.6
Nn1g09342 Nelumbo nucifera HOM05D005452 ORTHO05D006618 1.1e-06 57.0 60 51.7


User provided reference genes

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