Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.5e-33 145.6 74 100.0
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 5.8e-25 117.1 73 83.6
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 9.9e-17 89.7 50 92.0
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 1.8e-13 79.0 50 76.0
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 5.1e-13 77.4 53 71.7
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 5.1e-13 77.4 50 74.0
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 5.1e-13 77.4 51 80.4
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 1.9e-12 75.5 50 74.0
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 3.3e-12 74.7 50 74.0
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 7.4e-12 73.6 50 70.0
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 9.6e-12 73.2 50 68.0
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 9.6e-12 73.2 50 72.0
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 1.3e-11 72.8 50 72.0
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 1.6e-11 72.4 50 72.0
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 1.6e-11 72.4 50 72.0
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 2.1e-11 72.0 50 70.0
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 2.8e-11 71.6 50 70.0
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 2.8e-11 71.6 50 70.0
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 2.8e-11 71.6 50 66.0
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 3.7e-11 71.2 50 72.0
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 3.7e-11 71.2 50 70.0
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 3.7e-11 71.2 50 70.0
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 4.8e-11 70.9 50 68.0
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 6.2e-11 70.5 50 68.0
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 6.2e-11 70.5 50 68.0
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 8.1e-11 70.1 49 71.4
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 8.1e-11 70.1 50 68.0
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 8.1e-11 70.1 50 72.0
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 8.1e-11 70.1 50 70.0
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 1.1e-10 69.7 50 68.0
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 1.8e-10 68.9 50 66.0
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 2.4e-10 68.6 49 71.4
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 2.4e-10 68.6 49 71.4
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 2.4e-10 68.6 50 70.0
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 2.4e-10 68.6 50 70.0
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 3.1e-10 68.2 50 68.0
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 4.0e-10 67.8 50 66.0
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 4.0e-10 67.8 50 68.0
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 5.3e-10 67.4 50 64.0
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 5.3e-10 67.4 50 64.0
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 5.3e-10 67.4 50 66.0
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 5.3e-10 67.4 50 66.0
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 6.9e-10 67.0 50 64.0
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 6.9e-10 67.0 50 64.0
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 9.0e-10 66.6 50 68.0
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 9.0e-10 66.6 50 64.0
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 9.0e-10 66.6 50 68.0
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 1.2e-09 66.2 50 62.0
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 1.2e-09 66.2 50 64.0
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 1.5e-09 65.9 51 60.8
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 2.0e-09 65.5 50 66.0
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 2.6e-09 65.1 50 60.0
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 3.4e-09 64.7 50 62.0
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 3.4e-09 64.7 50 62.0
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 4.5e-09 64.3 50 64.0
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 4.5e-09 64.3 50 60.0
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 4.5e-09 64.3 50 64.0
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 5.8e-09 63.9 50 60.0
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 7.6e-09 63.5 50 64.0
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 7.6e-09 63.5 50 60.0
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 1.0e-08 63.2 49 65.3
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 3.8e-08 61.2 50 60.0
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 3.8e-08 61.2 50 60.0
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 3.8e-08 61.2 51 60.8
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 6.5e-08 60.5 50 58.0
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 8.4e-08 60.1 49 59.2
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.1e-07 59.7 44 61.4
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.1e-07 59.7 49 59.2
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.4e-07 59.3 50 58.0
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 1.4e-07 59.3 51 54.9
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 1.9e-07 58.9 50 56.0
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 3.2e-07 58.2 49 57.1
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 3.2e-07 58.2 49 57.1
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 3.2e-07 58.2 49 57.1
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 3.2e-07 58.2 49 57.1
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 3.2e-07 58.2 50 58.0
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 4.2e-07 57.8 50 54.0
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 4.2e-07 57.8 58 55.2
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 5.5e-07 57.4 53 52.8
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 5.5e-07 57.4 50 56.0
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 5.5e-07 57.4 53 56.6
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 7.1e-07 57.0 50 56.0
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 7.1e-07 57.0 50 54.0
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 1.2e-06 56.2 50 54.0
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 1.2e-06 56.2 50 54.0
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.2e-06 56.2 50 54.0
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 1.2e-06 56.2 50 56.0
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 4.6e-06 54.3 50 54.0
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 6.0e-06 53.9 50 52.0
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 6.0e-06 53.9 50 52.0
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 7.9e-06 53.5 50 50.0
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 7.9e-06 53.5 50 50.0


User provided reference genes

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