Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4748 Erigeron canadensis HOM05D006643 ORTHO05D008368 1.4e-102 376.3 195 100.0
Lsat_1_v5_gn_5_71141 Lactuca sativa HOM05D006643 ORTHO05D008368 1.7e-92 342.8 195 88.7
HanXRQChr15g0469161 Helianthus annuus HOM05D006643 ORTHO05D008368 7.2e-91 337.4 195 86.2
Atru.chr4.1246 Acer truncatum HOM05D006643 ORTHO05D008368 1.0e-84 317.0 200 81.5
Haze_01468 Corylus avellana HOM05D006643 ORTHO05D008368 2.9e-84 315.5 202 80.7
Lj6C78T6 Lonicera japonica HOM05D006643 ORTHO05D008368 3.8e-84 315.1 192 82.8
Lju682C5T3 Lonicera japonica HOM05D006643 ORTHO05D008368 5.0e-84 314.7 192 82.3
Manes.04G044300 Manihot esculenta HOM05D006643 ORTHO05D008368 5.0e-84 314.7 191 82.2
Sabra07G0106000 Salix brachista HOM05D006643 ORTHO05D008368 6.5e-84 314.3 200 80.5
Solyc06g053370.3 Solanum lycopersicum HOM05D006643 ORTHO05D008368 6.5e-84 314.3 202 78.2
Thecc.04G176000 Theobroma cacao HOM05D006643 ORTHO05D008368 6.5e-84 314.3 200 81.5
Manes.11G122600 Manihot esculenta HOM05D006643 ORTHO05D008368 8.5e-84 313.9 191 81.7
Potri.007G130300 Populus trichocarpa HOM05D006643 ORTHO05D008368 1.1e-83 313.5 200 80.5
Sopen06g018420 Solanum pennellii HOM05D006643 ORTHO05D008368 1.1e-83 313.5 202 78.2
Cfa000631 Carpinus fangiana HOM05D006643 ORTHO05D008368 1.5e-83 313.2 202 80.2
Dinv44177 Davidia involucrata HOM05D006643 ORTHO05D008368 1.9e-83 312.8 202 79.7
TAR633G0985 Trochodendron aralioides HOM05D006643 ORTHO05D008368 1.9e-83 312.8 202 79.7
QL10p050520 Quercus lobata HOM05D006643 ORTHO05D008368 2.5e-83 312.4 201 80.1
PGSC0003DMG400016303 Solanum tuberosum HOM05D006643 ORTHO05D008368 3.2e-83 312.0 202 77.7
TWI15G0378 Tripterygium wilfordii HOM05D006643 ORTHO05D008368 3.2e-83 312.0 200 78.5
GSVIVG01010795001 Vitis vinifera HOM05D006643 ORTHO05D008368 5.5e-83 311.2 202 79.7
Dinv22753 Davidia involucrata HOM05D006643 ORTHO05D008368 1.2e-82 310.1 202 79.2
Gohir.D02G012600 Gossypium hirsutum HOM05D006643 ORTHO05D008368 1.2e-82 310.1 200 80.0
Potri.017G027800 Populus trichocarpa HOM05D006643 ORTHO05D008368 1.2e-82 310.1 200 78.5
Ciclev10021679m.g Citrus clementina HOM05D006643 ORTHO05D008368 1.6e-82 309.7 200 80.0
Nn7g37557 Nelumbo nucifera HOM05D006643 ORTHO05D008368 1.6e-82 309.7 202 76.7
CANSAT78G1363 Cannabis sativa HOM05D006643 ORTHO05D008368 2.1e-82 309.3 202 79.2
Glyma.11G126900 Glycine max HOM05D006643 ORTHO05D008368 2.7e-82 308.9 202 78.2
Glyma.12G051500 Glycine max HOM05D006643 ORTHO05D008368 2.7e-82 308.9 202 78.2
arahy.Tifrunner.gnm1.ann1.C0G1TY Arachis hypogaea HOM05D006643 ORTHO05D008368 3.6e-82 308.5 202 75.7
arahy.Tifrunner.gnm1.ann1.NE1CMA Arachis hypogaea HOM05D006643 ORTHO05D008368 3.6e-82 308.5 202 75.7
Gorai.005G016100 Gossypium raimondii HOM05D006643 ORTHO05D008368 3.6e-82 308.5 191 82.2
Nitab4.5_0006064g0060 Nicotiana tabacum HOM05D006643 ORTHO05D008368 3.6e-82 308.5 202 76.7
MELO3C022444.2 Cucumis melo HOM05D006643 ORTHO05D008368 4.7e-82 308.1 202 76.7
CsaV3_6G006800 Cucumis sativus L. HOM05D006643 ORTHO05D008368 4.7e-82 308.1 202 76.7
Eucgr.A00099 Eucalyptus grandis HOM05D006643 ORTHO05D008368 6.1e-82 307.8 202 78.7
Oeu034449.1 Olea europaea HOM05D006643 ORTHO05D008368 6.1e-82 307.8 202 77.7
Cc04_g06020 Coffea canephora HOM05D006643 ORTHO05D008368 8.0e-82 307.4 202 80.2
Duzib268G1702 Durio zibethinus HOM05D006643 ORTHO05D008368 8.0e-82 307.4 191 81.7
Phvul.011G053600 Phaseolus vulgaris HOM05D006643 ORTHO05D008368 8.0e-82 307.4 202 76.7
MSTRG.22006 Avicennia marina HOM05D006643 ORTHO05D008368 1.0e-81 307.0 202 77.2
Duzib151G1217 Durio zibethinus HOM05D006643 ORTHO05D008368 1.0e-81 307.0 200 79.5
Peaxi162Scf00184g00072 Petunia axillaris HOM05D006643 ORTHO05D008368 1.0e-81 307.0 202 77.7
Prupe.8G006500 Prunus persica HOM05D006643 ORTHO05D008368 1.0e-81 307.0 200 79.0
PGR083G2474 Punica granatum HOM05D006643 ORTHO05D008368 1.0e-81 307.0 202 79.7
Rhsim02G0081600 Rhododendron simsii HOM05D006643 ORTHO05D008368 1.0e-81 307.0 192 81.8
Rhsim09G0023800 Rhododendron simsii HOM05D006643 ORTHO05D008368 1.0e-81 307.0 193 81.3
Sed0005729 Sechium edule HOM05D006643 ORTHO05D008368 1.0e-81 307.0 202 77.2
Gohir.A02G011800 Gossypium hirsutum HOM05D006643 ORTHO05D008368 1.4e-81 306.6 191 82.2
VMungo1127G1158 Vigna mungo HOM05D006643 ORTHO05D008368 1.8e-81 306.2 202 76.7
Nitab4.5_0001586g0090 Nicotiana tabacum HOM05D006643 ORTHO05D008368 2.3e-81 305.8 202 76.2
TPR.G34198 Trifolium pratense HOM05D006643 ORTHO05D008368 3.0e-81 305.4 202 76.2
Cpa.g.sc9.302 Carica papaya HOM05D006643 ORTHO05D008368 4.0e-81 305.1 200 77.0
Sabra17G0016800 Salix brachista HOM05D006643 ORTHO05D008368 5.2e-81 304.7 191 80.1
CAN.G136.18 Capsicum annuum HOM05D006643 ORTHO05D008368 6.8e-81 304.3 202 76.2
Ca_20795_v3 Cicer arietinum L. HOM05D006643 ORTHO05D008368 8.8e-81 303.9 202 75.7
DCAR_028434 Daucus carota HOM05D006643 ORTHO05D008368 1.5e-80 303.1 199 76.4
FvH4_6g51270 Fragaria vesca HOM05D006643 ORTHO05D008368 1.5e-80 303.1 202 78.2
Medtr4g067340 Medicago truncatula HOM05D006643 ORTHO05D008368 1.5e-80 303.1 202 75.7
Nn7g37598 Nelumbo nucifera HOM05D006643 ORTHO05D008368 2.0e-80 302.8 202 75.7
Migut.N03101 Erythranthe guttata HOM05D006643 ORTHO05D008368 2.6e-80 302.4 192 80.2
FAN14G5370 Fragaria x ananassa HOM05D006643 ORTHO05D008368 3.4e-80 302.0 202 77.7
Gohir.A02G093700 Gossypium hirsutum HOM05D006643 ORTHO05D008368 3.4e-80 302.0 191 80.6
MBI07_g02895_MAGBIO Magnolia biondii HOM05D006643 ORTHO05D008368 3.4e-80 302.0 202 75.7
FAN02G2944 Fragaria x ananassa HOM05D006643 ORTHO05D008368 5.7e-80 301.2 202 77.7
Sc13g0006740 Simmondsia chinensis HOM05D006643 ORTHO05D008368 5.7e-80 301.2 202 76.7
SGA_v2.0_scaffold17G08152 Striga asiatica HOM05D006643 ORTHO05D008368 5.7e-80 301.2 200 76.5
THA.LOC104802315 Tarenaya hassleriana HOM05D006643 ORTHO05D008368 5.7e-80 301.2 200 76.0
THA.LOC104803815 Tarenaya hassleriana HOM05D006643 ORTHO05D008368 7.5e-80 300.8 200 76.0
FAN05G3471 Fragaria x ananassa HOM05D006643 ORTHO05D008368 9.8e-80 300.4 202 77.2
Lalb_Chr01g0003121 Lupinus albus HOM05D006643 ORTHO05D008368 9.8e-80 300.4 201 76.1
Psat7g209520 Pisum sativum HOM05D006643 ORTHO05D008368 9.8e-80 300.4 202 73.8
SalBow6G5841 Salvia bowleyana HOM05D006643 ORTHO05D008368 9.8e-80 300.4 192 78.1
EL10Ac3g05986 Beta vulgaris HOM05D006643 ORTHO05D008368 1.3e-79 300.1 193 78.8
RcHm_v2.0_Chr2g0172871 Rosa chinensis HOM05D006643 ORTHO05D008368 1.7e-79 299.7 202 77.2
Gorai.005G126600 Gossypium raimondii HOM05D006643 ORTHO05D008368 2.2e-79 299.3 191 80.1
MD10G1004100 Malus domestica HOM05D006643 ORTHO05D008368 2.2e-79 299.3 202 77.2
Gohir.D02G111600 Gossypium hirsutum HOM05D006643 ORTHO05D008368 2.8e-79 298.9 191 79.6
Oeu020509.1 Olea europaea HOM05D006643 ORTHO05D008368 3.7e-79 298.5 199 75.4
Sp5g03640 Schrenkiella parvula HOM05D006643 ORTHO05D008368 4.8e-79 298.1 200 76.5
ClCG06G000950 Citrullus lanatus HOM05D006643 ORTHO05D008368 6.3e-79 297.7 175 83.4
AT3G59520 Arabidopsis thaliana HOM05D006643 ORTHO05D008368 8.3e-79 297.4 200 76.0
Aa31LG10G13850 Aethionema arabicum HOM05D006643 ORTHO05D008368 1.4e-78 296.6 191 78.0
Zm00001eb365770 Zea mays HOM05D006643 ORTHO05D008368 1.8e-78 296.2 195 76.4
Thhalv10006170m.g Eutrema salsugineum HOM05D006643 ORTHO05D008368 2.4e-78 295.8 200 75.0
Hund12018 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.4e-78 295.8 190 78.4
Aqoxy2G04152 Aquilegia oxysepala HOM05D006643 ORTHO05D008368 4.1e-78 295.0 202 75.2
CiPaw.02G053100 Carya illinoinensis HOM05D006643 ORTHO05D008368 4.1e-78 295.0 202 75.7
PSO017G5579 Papaver somniferum HOM05D006643 ORTHO05D008368 5.4e-78 294.7 202 75.7
AL5G41440 Arabidopsis lyrata HOM05D006643 ORTHO05D008368 7.0e-78 294.3 200 75.0
AUR62023855 Chenopodium quinoa HOM05D006643 ORTHO05D008368 2.7e-77 292.4 202 74.3
Os01g0895500 Oryza sativa ssp. japonica HOM05D006643 ORTHO05D008368 3.5e-77 292.0 193 75.6
PSO675G0996 Papaver somniferum HOM05D006643 ORTHO05D008368 4.5e-77 291.6 202 74.8
BraA09t40614Z Brassica rapa HOM05D006643 ORTHO05D008368 5.9e-77 291.2 191 77.5
HPP92_013566 Vanilla planifolia HOM05D006643 ORTHO05D008368 5.9e-77 291.2 202 72.3
A09p51790 Brassica napus HOM05D006643 ORTHO05D008368 7.7e-77 290.8 191 77.5
C08p34520 Brassica napus HOM05D006643 ORTHO05D008368 1.3e-76 290.0 191 77.5
BolC8t51053H Brassica oleracea HOM05D006643 ORTHO05D008368 1.3e-76 290.0 191 77.5
CARHR169900 Cardamine hirsuta HOM05D006643 ORTHO05D008368 1.3e-76 290.0 200 73.0
AUR62002333 Chenopodium quinoa HOM05D006643 ORTHO05D008368 1.7e-76 289.7 202 73.8
ATR0743G075 Amborella trichopoda HOM05D006643 ORTHO05D008368 2.3e-76 289.3 202 73.8
Carub.0005s2625 Capsella rubella HOM05D006643 ORTHO05D008368 2.3e-76 289.3 191 74.9
FAN09G1035 Fragaria x ananassa HOM05D006643 ORTHO05D008368 2.9e-76 288.9 202 74.3
Lalb_Chr03g0026051 Lupinus albus HOM05D006643 ORTHO05D008368 1.1e-75 287.0 175 81.1
Lalb_Chr19g0138371 Lupinus albus HOM05D006643 ORTHO05D008368 1.6e-74 283.1 201 70.6
SEGI_39406 Sequoiadendron giganteum HOM05D006643 ORTHO05D008368 1.6e-74 283.1 178 79.2
CSS0015670 Camellia sinensis var. sinensis HOM05D006643 ORTHO05D008368 7.5e-72 274.2 202 71.3
arahy.Tifrunner.gnm1.ann1.T4WUKA Arachis hypogaea HOM05D006643 ORTHO05D008368 9.2e-70 267.3 175 76.0
SHI23489 Sapria himalayana HOM05D006643 ORTHO05D008368 9.5e-67 257.3 191 67.5
Mapoly0003s0018 Marchantia polymorpha HOM05D006643 ORTHO05D008368 1.4e-65 253.4 192 65.6
SMO358G0698 Selaginella moellendorffii HOM05D006643 ORTHO05D008368 5.0e-60 235.0 192 62.0
Pp3c18_5250 Physcomitrium patens HOM05D006643 ORTHO05D008368 2.5e-59 232.6 178 64.0
EL10Ac3g05987 Beta vulgaris HOM05D001472 ORTHO05D002655 4.9e-55 218.4 175 67.4
CBR_g12522 Chara braunii HOM05D006643 ORTHO05D008368 5.0e-52 208.4 182 61.0
CBR_g3657 Chara braunii HOM05D006643 ORTHO05D008368 1.1e-51 207.2 182 59.9
unitig_22.g5711 Utricularia gibba HOM05D006643 ORTHO05D008368 6.2e-42 174.9 114 77.2
MCO15G668 Micromonas commoda HOM05D006643 ORTHO05D008368 2.4e-33 146.4 125 60.8
BcaC02g10058 Brassica carinata HOM05D006643 ORTHO05D008368 2.5e-19 99.8 201 40.8
PRCOL_00000202 Prasinoderma coloniale HOM05D006643 ORTHO05D008368 1.7e-15 87.0 140 40.0
Cre11.g467677 Chlamydomonas reinhardtii HOM05D006643 ORTHO05D008368 9.3e-14 81.3 176 33.5
Oeu003367.1 Olea europaea HOM05D006643 ORTHO05D008368 1.2e-08 64.3 89 42.7
Cre01.g050350 Chlamydomonas reinhardtii HOM05D006729 ORTHO05D008502 2.2e-07 60.1 110 30.9
BolC4t24900H Brassica oleracea HOM05D000302 ORTHO05D000334 6.5e-07 58.5 50 54.0
C04p33390 Brassica napus HOM05D000302 ORTHO05D000009 8.4e-07 58.2 50 54.0


User provided reference genes

Program Settings