Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4679 Erigeron canadensis HOM05D003139 ORTHO05D029286 1.3e-123 446.4 227 100.0
Lsat_1_v5_gn_8_24181 Lactuca sativa HOM05D003139 ORTHO05D029286 2.7e-65 252.7 186 71.5
Lsat_1_v5_gn_0_7921 Lactuca sativa HOM05D003139 ORTHO05D029286 1.7e-30 137.1 192 41.7
ECA232G3979 Erigeron canadensis HOM05D003139 ORTHO05D029286 8.5e-27 124.8 233 39.1
Dinv01029 Davidia involucrata HOM05D003139 ORTHO05D003540 6.1e-17 92.0 177 36.2
Dinv10925 Davidia involucrata HOM05D003139 ORTHO05D003540 6.1e-17 92.0 177 36.2
DCAR_028475 Daucus carota HOM05D003139 ORTHO05D003540 1.5e-15 87.4 176 33.5
CSS0050344 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 2.6e-15 86.7 148 39.2
Dinv11834 Davidia involucrata HOM05D003139 ORTHO05D003540 1.0e-11 74.7 150 36.0
Nitab4.5_0005744g0010 Nicotiana tabacum HOM05D003139 ORTHO05D003540 1.3e-11 74.3 157 33.1
Nitab4.5_0009769g0010 Nicotiana tabacum HOM05D003139 ORTHO05D003540 1.7e-11 73.9 152 32.9
Hma1.2p1_0874F.1_g231330 Hydrangea macrophylla HOM05D003139 ORTHO05D003540 8.6e-11 71.6 149 32.2
Peaxi162Scf00519g00066 Petunia axillaris HOM05D003139 ORTHO05D003540 8.6e-11 71.6 194 31.4
Migut.F00874 Erythranthe guttata HOM05D003139 ORTHO05D003540 1.2e-09 67.8 146 33.6
Oeu012633.1 Olea europaea HOM05D003139 ORTHO05D003540 1.2e-09 67.8 138 34.1
Solyc11g006900.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 6.2e-09 65.5 187 31.6
Sopen11g002810 Solanum pennellii HOM05D003139 ORTHO05D003540 6.2e-09 65.5 187 31.6
PGSC0003DMG400023971 Solanum tuberosum HOM05D003139 ORTHO05D003540 1.8e-08 63.9 190 31.6
Oeu024810.1 Olea europaea HOM05D003139 ORTHO05D003540 3.1e-08 63.2 171 31.0
Nitab4.5_0009833g0020 Nicotiana tabacum HOM05D003139 ORTHO05D003540 5.2e-08 62.4 162 28.4
Nitab4.5_0013140g0010 Nicotiana tabacum HOM05D003139 ORTHO05D003540 5.2e-08 62.4 136 30.1
HanXRQChr01g0010381 Helianthus annuus HOM05D003139 ORTHO05D003540 1.2e-07 61.2 155 32.3
ClCG10G018920 Citrullus lanatus HOM05D003139 ORTHO05D003540 2.6e-07 60.1 125 36.0
FAN02G0223 Fragaria x ananassa HOM05D003139 ORTHO05D003540 2.6e-07 60.1 124 35.5
Atru.chr8.1495 Acer truncatum HOM05D003139 ORTHO05D003540 3.4e-07 59.7 137 35.8
BcaB01g00349 Brassica carinata HOM05D003139 ORTHO05D003540 3.4e-07 59.7 156 31.4
FAN05G0400 Fragaria x ananassa HOM05D003139 ORTHO05D003540 4.4e-07 59.3 124 35.5
FAN05G1773 Fragaria x ananassa HOM05D003139 ORTHO05D003540 4.4e-07 59.3 124 35.5
Sed0002377 Sechium edule HOM05D003139 ORTHO05D003540 4.4e-07 59.3 123 33.3
AUR62006190 Chenopodium quinoa HOM05D003139 ORTHO05D003540 5.8e-07 58.9 161 31.7
ClCG04G010080 Citrullus lanatus HOM05D003139 ORTHO05D003540 7.5e-07 58.5 155 31.0
SalBow6G1960 Salvia bowleyana HOM05D003139 ORTHO05D003540 7.5e-07 58.5 139 31.7
Lsat_1_v5_gn_5_164981 Lactuca sativa HOM05D003139 ORTHO05D003540 9.8e-07 58.2 139 35.3
EL10Ac7g16909 Beta vulgaris HOM05D003139 ORTHO05D003540 1.3e-06 57.8 137 32.8
AUR62028515 Chenopodium quinoa HOM05D003139 ORTHO05D003540 1.3e-06 57.8 190 29.5
FvH4_6g18850 Fragaria vesca HOM05D003139 ORTHO05D003540 1.3e-06 57.8 124 34.7
Solyc05g055270.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 1.3e-06 57.8 146 30.1
Actinidia05423 Actinidia chinensis HOM05D003139 ORTHO05D003540 1.7e-06 57.4 123 33.3
CsaV3_3G037330 Cucumis sativus L. HOM05D003139 ORTHO05D003540 1.7e-06 57.4 125 35.2
ECA247G2190 Erigeron canadensis HOM05D003139 ORTHO05D003540 1.7e-06 57.4 169 29.6
Ah.15g090850 Amaranthus hybridus HOM05D003139 ORTHO05D003540 2.2e-06 57.0 195 28.7
MELO3C024549.2 Cucumis melo HOM05D003139 ORTHO05D003540 2.2e-06 57.0 152 31.6
FAN09G1837 Fragaria x ananassa HOM05D003139 ORTHO05D003540 2.2e-06 57.0 124 34.7
AT3G52710 Arabidopsis thaliana HOM05D003139 ORTHO05D003540 2.9e-06 56.6 184 30.4
CSS0031410 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 3.7e-06 56.2 119 34.5
Ca_08987_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 3.7e-06 56.2 131 32.8
Lalb_Chr02g0154921 Lupinus albus HOM05D003139 ORTHO05D003540 3.7e-06 56.2 130 33.1
Phvul.001G190700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 3.7e-06 56.2 133 34.6
Sc20g0006320 Simmondsia chinensis HOM05D003139 ORTHO05D003540 3.7e-06 56.2 126 34.1
Sopen05g033710 Solanum pennellii HOM05D003139 ORTHO05D003540 3.7e-06 56.2 176 29.5
FAN14G1758 Fragaria x ananassa HOM05D003139 ORTHO05D003540 6.4e-06 55.5 124 33.9
Hma1.2p1_0820F.1_g223870 Hydrangea macrophylla HOM05D003139 ORTHO05D003540 6.4e-06 55.5 122 32.8
TWI53G0306 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 6.4e-06 55.5 125 33.6
TAR369G0615 Trochodendron aralioides HOM05D003139 ORTHO05D003540 6.4e-06 55.5 174 29.9
Aqoxy4G02769 Aquilegia oxysepala HOM05D003139 ORTHO05D003540 8.3e-06 55.1 160 32.5
Phvul.007G152700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 8.3e-06 55.1 134 32.8
TWI74G1218 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 8.3e-06 55.1 126 33.3


User provided reference genes

Program Settings