Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4615 Erigeron canadensis HOM05D002482 ORTHO05D002594 1.2e-41 173.3 126 100.0
HanXRQChr13g0404251 Helianthus annuus HOM05D002482 ORTHO05D002594 1.9e-15 86.3 128 56.2
CANSAT54G1212 Cannabis sativa HOM05D002482 ORTHO05D002594 1.9e-12 76.3 147 48.3
Atru.chr3.2481 Acer truncatum HOM05D002482 ORTHO05D002594 2.5e-12 75.9 140 41.4
HanXRQChr01g0021081 Helianthus annuus HOM05D002482 ORTHO05D002594 2.5e-12 75.9 136 40.4
RcHm_v2.0_Chr5g0077891 Rosa chinensis HOM05D002482 ORTHO05D002594 2.5e-12 75.9 140 40.7
FAN11G3364 Fragaria x ananassa HOM05D002482 ORTHO05D002594 4.3e-12 75.1 139 43.2
Lsat_1_v5_gn_6_49741 Lactuca sativa HOM05D002482 ORTHO05D002594 7.4e-12 74.3 117 68.4
MD11G1024200 Malus domestica HOM05D002482 ORTHO05D002594 7.4e-12 74.3 140 40.0
Haze_23038 Corylus avellana HOM05D002482 ORTHO05D002594 9.6e-12 73.9 139 41.0
CiPaw.14G125600 Carya illinoinensis HOM05D002482 ORTHO05D002594 1.3e-11 73.6 139 46.0
HanXRQChr02g0056741 Helianthus annuus HOM05D002482 ORTHO05D002594 1.6e-11 73.2 126 46.0
ClCG03G013620 Citrullus lanatus HOM05D002482 ORTHO05D002594 2.1e-11 72.8 141 39.7
Prupe.6G020200 Prunus persica HOM05D002482 ORTHO05D002594 2.1e-11 72.8 140 40.0
TAR636G3241 Trochodendron aralioides HOM05D002482 ORTHO05D002594 3.6e-11 72.0 140 40.7
TAR633G2740 Trochodendron aralioides HOM05D002482 ORTHO05D002594 4.8e-11 71.6 140 36.4
Ciclev10017123m.g Citrus clementina HOM05D002482 ORTHO05D002594 6.2e-11 71.2 140 40.7
Duzib170G0550 Durio zibethinus HOM05D002482 ORTHO05D002594 8.1e-11 70.9 141 38.3
TAR369G1015 Trochodendron aralioides HOM05D002482 ORTHO05D002594 8.1e-11 70.9 140 37.9
Sc09g0000420 Simmondsia chinensis HOM05D002482 ORTHO05D002594 1.1e-10 70.5 141 39.7
FvH4_3g43480 Fragaria vesca HOM05D002482 ORTHO05D002594 1.8e-10 69.7 143 37.8
FAN21G3143 Fragaria x ananassa HOM05D002482 ORTHO05D002594 1.8e-10 69.7 135 40.0
Potri.003G211200 Populus trichocarpa HOM05D002482 ORTHO05D002594 2.4e-10 69.3 140 37.1
Potri.T085200 Populus trichocarpa HOM05D002482 ORTHO05D002594 2.4e-10 69.3 140 37.1
MELO3C015682.2 Cucumis melo HOM05D002482 ORTHO05D002594 4.0e-10 68.6 141 38.3
CsaV3_1G042450 Cucumis sativus L. HOM05D002482 ORTHO05D002594 4.0e-10 68.6 141 38.3
Lj3g0009151 Lotus japonicus HOM05D002482 ORTHO05D002594 4.0e-10 68.6 137 38.0
MD03G1021700 Malus domestica HOM05D002482 ORTHO05D002594 4.0e-10 68.6 140 47.9
Duzib150G0288 Durio zibethinus HOM05D002482 ORTHO05D002594 5.3e-10 68.2 139 38.8
CiPaw.13G167200 Carya illinoinensis HOM05D002482 ORTHO05D002594 6.9e-10 67.8 140 37.1
MBI01_g20397_MAGBIO Magnolia biondii HOM05D002482 ORTHO05D002594 6.9e-10 67.8 140 38.6
MBI04_g32793_MAGBIO Magnolia biondii HOM05D002482 ORTHO05D002594 9.0e-10 67.4 140 36.4
Sc13g0002170 Simmondsia chinensis HOM05D002482 ORTHO05D002594 9.0e-10 67.4 140 35.7
Rhsim01G0189200 Rhododendron simsii HOM05D002482 ORTHO05D002594 1.2e-09 67.0 144 38.2
Ah.06g193390 Amaranthus hybridus HOM05D002482 ORTHO05D002594 1.5e-09 66.6 131 41.2
Sed0019726 Sechium edule HOM05D002482 ORTHO05D002594 1.5e-09 66.6 141 36.9
TAR623G0302 Trochodendron aralioides HOM05D002482 ORTHO05D002594 1.5e-09 66.6 140 40.0
MBI02_g15228_MAGBIO Magnolia biondii HOM05D002482 ORTHO05D002594 2.0e-09 66.2 126 36.5
arahy.Tifrunner.gnm1.ann1.KXG6SZ Arachis hypogaea HOM05D002482 ORTHO05D002594 2.6e-09 65.9 139 35.3
arahy.Tifrunner.gnm1.ann1.SGG4FM Arachis hypogaea HOM05D002482 ORTHO05D002594 2.6e-09 65.9 139 35.3
Potri.001G015000 Populus trichocarpa HOM05D002482 ORTHO05D002594 2.6e-09 65.9 140 45.0
VMungo1080G0530 Vigna mungo HOM05D002482 ORTHO05D002594 2.6e-09 65.9 141 36.9
QL01p007129 Quercus lobata HOM05D002482 ORTHO05D002594 3.4e-09 65.5 139 43.9
MSTRG.17570 Avicennia marina HOM05D002482 ORTHO05D002594 4.5e-09 65.1 138 37.0
Medtr2g098560 Medicago truncatula HOM05D002482 ORTHO05D002594 4.5e-09 65.1 137 33.6
Duzib168G0719 Durio zibethinus HOM05D002482 ORTHO05D002594 5.8e-09 64.7 140 47.1
TWI60G0941 Tripterygium wilfordii HOM05D002482 ORTHO05D002594 5.8e-09 64.7 144 36.1
Dinv36314 Davidia involucrata HOM05D002482 ORTHO05D002594 7.6e-09 64.3 140 45.7
Manes.06G169100 Manihot esculenta HOM05D002482 ORTHO05D002594 7.6e-09 64.3 140 43.6
Sabra01G0010600 Salix brachista HOM05D002482 ORTHO05D002594 7.6e-09 64.3 137 38.0
Sed0013064 Sechium edule HOM05D002482 ORTHO05D002594 7.6e-09 64.3 139 36.0
Dinv08056 Davidia involucrata HOM05D002482 ORTHO05D002594 9.9e-09 63.9 139 34.5
Migut.N02291 Erythranthe guttata HOM05D002482 ORTHO05D002594 9.9e-09 63.9 135 42.2
Hma1.2p1_1169F.1_g263270 Hydrangea macrophylla HOM05D002482 ORTHO05D002594 9.9e-09 63.9 141 47.5
ECA248G2310 Erigeron canadensis HOM05D002482 ORTHO05D002594 1.3e-08 63.5 136 35.3
Sabra03G0154000 Salix brachista HOM05D002482 ORTHO05D002594 1.3e-08 63.5 137 38.7
Zm00001eb189020 Zea mays HOM05D002482 ORTHO05D002594 1.3e-08 63.5 136 33.8
FAN16G3054 Fragaria x ananassa HOM05D002482 ORTHO05D002594 1.7e-08 63.2 138 37.0
Zm00001eb252770 Zea mays HOM05D002482 ORTHO05D002594 1.7e-08 63.2 137 35.0
Ca_01268_v3 Cicer arietinum L. HOM05D002482 ORTHO05D002594 2.2e-08 62.8 138 31.9
Glyma.15G031200 Glycine max HOM05D002482 ORTHO05D002594 2.2e-08 62.8 140 35.0
QL07p023255 Quercus lobata HOM05D002482 ORTHO05D002594 2.2e-08 62.8 141 32.6
CANSAT64G1244 Cannabis sativa HOM05D002482 ORTHO05D002594 2.9e-08 62.4 134 34.3
Cpa.g.sc85.84 Carica papaya HOM05D002482 ORTHO05D002594 2.9e-08 62.4 139 34.5
Manes.14G014800 Manihot esculenta HOM05D002482 ORTHO05D002594 2.9e-08 62.4 140 44.3
PSO339G2218 Papaver somniferum HOM05D002482 ORTHO05D002594 2.9e-08 62.4 140 37.9
Phvul.005G151900 Phaseolus vulgaris HOM05D002482 ORTHO05D002594 2.9e-08 62.4 141 34.8
Psat1g007440 Pisum sativum HOM05D002482 ORTHO05D002594 3.8e-08 62.0 139 32.4
TWI34G0028 Tripterygium wilfordii HOM05D002482 ORTHO05D002594 3.8e-08 62.0 141 45.4
COL.COLO4_38439 Corchorus olitorius HOM05D002482 ORTHO05D002594 4.9e-08 61.6 140 45.0
Glyma.13G343200 Glycine max HOM05D002482 ORTHO05D002594 4.9e-08 61.6 140 35.7
MBI18_g27541_MAGBIO Magnolia biondii HOM05D002482 ORTHO05D002594 4.9e-08 61.6 137 33.6
Prupe.7G074700 Prunus persica HOM05D002482 ORTHO05D002594 4.9e-08 61.6 139 33.1
TPR.G18866 Trifolium pratense HOM05D002482 ORTHO05D002594 4.9e-08 61.6 138 35.5
CDE07G0076 Ceratophyllum demersum HOM05D000159 ORTHO05D000148 6.4e-08 61.2 135 34.8
Haze_19967 Corylus avellana HOM05D002482 ORTHO05D002594 6.4e-08 61.2 141 34.0
Glyma.03G143200 Glycine max HOM05D002482 ORTHO05D002594 6.4e-08 61.2 140 31.4
Lalb_Chr14g0372381 Lupinus albus HOM05D002482 ORTHO05D002594 6.4e-08 61.2 137 33.6
PSO384G0797 Papaver somniferum HOM05D002482 ORTHO05D002594 6.4e-08 61.2 146 41.8
PSO541G1056 Papaver somniferum HOM05D002482 ORTHO05D002594 6.4e-08 61.2 138 33.3
Manes.08G045200 Manihot esculenta HOM05D002482 ORTHO05D002594 8.4e-08 60.8 139 36.7
Nitab4.5_0004499g0020 Nicotiana tabacum HOM05D002482 ORTHO05D002594 8.4e-08 60.8 139 37.4
Oeu014058.2 Olea europaea HOM05D002482 ORTHO05D002594 8.4e-08 60.8 140 36.4
Glyma.12G053700 Glycine max HOM05D002482 ORTHO05D002594 1.1e-07 60.5 141 33.3
CDE04G2038 Ceratophyllum demersum HOM05D002482 ORTHO05D002594 1.4e-07 60.1 138 34.1
PSO675G7776 Papaver somniferum HOM05D002482 ORTHO05D002594 1.4e-07 60.1 139 33.8
Aqoxy1G00163 Aquilegia oxysepala HOM05D002482 ORTHO05D002594 1.9e-07 59.7 134 34.3
arahy.Tifrunner.gnm1.ann1.T66IS6 Arachis hypogaea HOM05D002482 ORTHO05D002594 1.9e-07 59.7 142 33.1
A07p23740 Brassica napus HOM05D002482 ORTHO05D002594 1.9e-07 59.7 134 32.8
MBI07_g38549_MAGBIO Magnolia biondii HOM05D002482 ORTHO05D002594 1.9e-07 59.7 137 32.8
ATR0605G251 Amborella trichopoda HOM05D002482 ORTHO05D002594 2.4e-07 59.3 140 38.6
Phvul.001G141100 Phaseolus vulgaris HOM05D002482 ORTHO05D002594 2.4e-07 59.3 140 31.4
Thecc.09G221400 Theobroma cacao HOM05D002482 ORTHO05D002594 2.4e-07 59.3 140 45.7
Zm00001eb006280 Zea mays HOM05D002482 ORTHO05D002594 2.4e-07 59.3 136 33.1
Atru.chr8.1067 Acer truncatum HOM05D002482 ORTHO05D002594 3.2e-07 58.9 142 32.4
CiPaw.09G031700 Carya illinoinensis HOM05D002482 ORTHO05D002594 3.2e-07 58.9 144 32.6
Eucgr.B03652 Eucalyptus grandis HOM05D002482 ORTHO05D002594 3.2e-07 58.9 140 37.1
BcaB02g07565 Brassica carinata HOM05D002482 ORTHO05D002594 4.2e-07 58.5 134 32.1
Cfa016904 Carpinus fangiana HOM05D002482 ORTHO05D002594 4.2e-07 58.5 141 35.5
Glyma.11G129100 Glycine max HOM05D002482 ORTHO05D002594 4.2e-07 58.5 136 34.6
Peaxi162Scf00612g00122 Petunia axillaris HOM05D000001 ORTHO05D010419 4.2e-07 58.5 138 37.7
Lalb_Chr22g0352231 Lupinus albus HOM05D002482 ORTHO05D002594 7.1e-07 57.8 137 33.6
Nn7g36038 Nelumbo nucifera HOM05D002482 ORTHO05D002594 9.3e-07 57.4 130 36.2
Nitab4.5_0000006g0620 Nicotiana tabacum HOM05D002482 ORTHO05D002594 9.3e-07 57.4 139 35.3
Zm00001eb083130 Zea mays HOM05D002482 ORTHO05D002594 9.3e-07 57.4 136 33.1
BraA07t30027Z Brassica rapa HOM05D002482 ORTHO05D002594 1.2e-06 57.0 134 33.6
Gohir.A04G069200 Gossypium hirsutum HOM05D002482 ORTHO05D002594 1.2e-06 57.0 139 32.4
Gohir.D06G112200 Gossypium hirsutum HOM05D002482 ORTHO05D002594 1.2e-06 57.0 139 33.1
Gorai.010G128000 Gossypium raimondii HOM05D002482 ORTHO05D002594 1.2e-06 57.0 139 33.1
Sabra03G0156500 Salix brachista HOM05D002482 ORTHO05D002594 1.2e-06 57.0 138 34.1
Cpa.g.sc117.7 Carica papaya HOM05D002482 ORTHO05D002594 1.6e-06 56.6 140 32.9
AUR62024320 Chenopodium quinoa HOM05D002482 ORTHO05D002594 1.6e-06 56.6 139 33.8
Duzib093G0057 Durio zibethinus HOM05D002482 ORTHO05D002594 1.6e-06 56.6 139 31.7
Gohir.A01G192100 Gossypium hirsutum HOM05D002482 ORTHO05D002594 1.6e-06 56.6 139 32.4
Gohir.D01G177900 Gossypium hirsutum HOM05D002482 ORTHO05D002594 1.6e-06 56.6 139 32.4
Lalb_Chr24g0396901 Lupinus albus HOM05D002482 ORTHO05D002594 1.6e-06 56.6 117 35.0
RcHm_v2.0_Chr3g0480181 Rosa chinensis HOM05D002482 ORTHO05D002594 1.6e-06 56.6 137 31.4
Zm00001eb285300 Zea mays HOM05D002482 ORTHO05D002594 1.6e-06 56.6 134 32.1
BcaC08g44879 Brassica carinata HOM05D002482 ORTHO05D002594 2.1e-06 56.2 134 32.8
BolC6t37649H Brassica oleracea HOM05D002482 ORTHO05D002594 2.1e-06 56.2 134 32.8
Duzib106G0603 Durio zibethinus HOM05D002482 ORTHO05D002594 2.1e-06 56.2 138 31.9
Gorai.002G225200 Gossypium raimondii HOM05D002482 ORTHO05D002594 2.1e-06 56.2 139 32.4
GSVIVG01033518001 Vitis vinifera HOM05D002482 ORTHO05D002594 2.1e-06 56.2 126 32.5
EL10Ac3g06936 Beta vulgaris HOM05D002482 ORTHO05D002594 2.7e-06 55.8 138 34.8
CiPaw.10G027600 Carya illinoinensis HOM05D002482 ORTHO05D002594 2.7e-06 55.8 42 66.7
MD12G1058100 Malus domestica HOM05D002482 ORTHO05D002594 2.7e-06 55.8 139 30.2
CSS0050309 Camellia sinensis var. sinensis HOM05D002482 ORTHO05D002594 3.5e-06 55.5 144 37.5
Gohir.D04G085264 Gossypium hirsutum HOM05D002482 ORTHO05D002594 3.5e-06 55.5 139 32.4
Eucgr.J00835 Eucalyptus grandis HOM05D002482 ORTHO05D002594 4.6e-06 55.1 124 35.5
Oeu059767.1 Olea europaea HOM05D002482 ORTHO05D002594 4.6e-06 55.1 144 44.4
VMungo1383G2553 Vigna mungo HOM05D002482 ORTHO05D002594 4.6e-06 55.1 141 31.9
AUR62012058 Chenopodium quinoa HOM05D002482 ORTHO05D002594 6.0e-06 54.7 139 33.8
MD14G1059900 Malus domestica HOM05D002482 ORTHO05D002594 7.9e-06 54.3 139 30.2


User provided reference genes

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