Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4485 Erigeron canadensis HOM05D004673 ORTHO05D005596 0.0e+00 1271.9 1277 100.0
Lsat_1_v5_gn_1_25861 Lactuca sativa HOM05D004673 ORTHO05D005596 1.9e-78 298.9 810 63.7
ECA233G2517 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.9e-72 276.6 881 65.6
HanXRQChr13g0405741 Helianthus annuus HOM05D004673 ORTHO05D005596 4.2e-62 244.6 838 58.8
HanXRQChr13g0405711 Helianthus annuus HOM05D004673 ORTHO05D005596 2.1e-61 242.3 808 62.0
Lsat_1_v5_gn_6_55581 Lactuca sativa HOM05D004673 ORTHO05D005596 3.9e-60 238.0 804 62.1
Lsat_1_v5_gn_6_55380 Lactuca sativa HOM05D004673 ORTHO05D005596 3.6e-58 231.5 865 59.8
ECA233G4672 Erigeron canadensis HOM05D004673 ORTHO05D005596 2.7e-53 215.3 811 60.4
HanXRQChr07g0187111 Helianthus annuus HOM05D004673 ORTHO05D005596 5.3e-49 201.1 348 63.8
Lsat_1_v5_gn_6_55460 Lactuca sativa HOM05D004673 ORTHO05D005596 2.6e-48 198.7 814 59.2
Lsat_1_v5_gn_6_53540 Lactuca sativa HOM05D004673 ORTHO05D005596 3.5e-45 188.3 504 60.9
DCAR_030109 Daucus carota HOM05D004673 ORTHO05D005596 1.7e-39 169.5 562 55.9
ECA240G1657 Erigeron canadensis HOM05D004673 ORTHO05D005596 4.2e-38 164.9 143 62.2
Nitab4.5_0000551g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 2.5e-35 155.6 480 66.5
Nitab4.5_0006195g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 2.4e-33 149.1 484 66.3
Cc01_g00160 Coffea canephora HOM05D004673 ORTHO05D005596 2.6e-32 145.6 343 65.3
Atru.chr1.2923 Acer truncatum HOM05D004673 ORTHO05D005596 8.5e-31 140.6 492 55.5
DCAR_030101 Daucus carota HOM05D004673 ORTHO05D005596 3.9e-28 131.7 325 49.8
Sabra01G0002300 Salix brachista HOM05D004673 ORTHO05D005596 3.9e-28 131.7 323 67.5
CSS0005892 Camellia sinensis var. sinensis HOM05D004673 ORTHO05D005596 6.7e-28 131.0 484 56.8
DCAR_030100 Daucus carota HOM05D004673 ORTHO05D005596 1.1e-27 130.2 499 40.1
QL01p003522 Quercus lobata HOM05D000182 ORTHO05D005596 1.1e-27 130.2 492 43.3
DCAR_030114 Daucus carota HOM05D004673 ORTHO05D005596 7.4e-27 127.5 324 59.6
TAR623G1034 Trochodendron aralioides HOM05D004673 ORTHO05D005596 3.7e-26 125.2 486 53.7
CsaV3_1G041610 Cucumis sativus L. HOM05D004673 ORTHO05D005596 6.3e-26 124.4 458 64.2
Aqoxy1G00488 Aquilegia oxysepala HOM05D004673 ORTHO05D005596 8.2e-26 124.0 312 64.4
DCAR_030108 Daucus carota HOM05D004673 ORTHO05D005596 5.3e-25 121.3 275 51.6
Potri.001G003200 Populus trichocarpa HOM05D004673 ORTHO05D005596 6.9e-25 120.9 308 68.5
Manes.03G086906 Manihot esculenta HOM05D004673 ORTHO05D005596 2.0e-24 119.4 309 65.0
TWI60G0809 Tripterygium wilfordii HOM05D004673 ORTHO05D005596 2.0e-24 119.4 307 63.2
DCAR_030099 Daucus carota HOM05D004673 ORTHO05D005596 2.6e-24 119.0 549 40.4
DCAR_030110 Daucus carota HOM05D004673 ORTHO05D005596 3.4e-24 118.6 320 60.6
Prupe.7G003900 Prunus persica HOM05D004673 ORTHO05D005596 3.4e-24 118.6 333 64.0
DCAR_032195 Daucus carota HOM05D004673 ORTHO05D005596 1.0e-23 117.1 313 60.7
DCAR_013113 Daucus carota HOM05D004673 ORTHO05D005596 2.9e-23 115.5 200 65.5
Cfa009556 Carpinus fangiana HOM05D004673 ORTHO05D005596 3.8e-23 115.2 206 66.0
MELO3C015571.2 Cucumis melo HOM05D004673 ORTHO05D005596 3.8e-23 115.2 458 63.3
Peaxi162Scf00705g00063 Petunia axillaris HOM05D004673 ORTHO05D005596 1.1e-22 113.6 309 64.1
ClCG03G014570 Citrullus lanatus HOM05D004673 ORTHO05D005596 1.4e-22 113.2 482 56.0
QL01p004573 Quercus lobata HOM05D004673 ORTHO05D005596 4.2e-22 111.7 331 63.7
AUR62032055 Chenopodium quinoa HOM05D004673 ORTHO05D005596 1.6e-21 109.8 327 59.3
HanXRQChr07g0187121 Helianthus annuus HOM05D004673 ORTHO05D005596 4.7e-21 108.2 87 65.5
Rhsim13G0233200 Rhododendron simsii HOM05D004673 ORTHO05D005596 4.7e-21 108.2 214 64.0
Dinv00554 Davidia involucrata HOM05D004673 ORTHO05D005596 6.1e-21 107.8 309 65.0
vmacro23200 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 6.1e-21 107.8 211 64.0
DCAR_030102 Daucus carota HOM05D004673 ORTHO05D005596 7.9e-21 107.5 320 44.7
DCAR_030112 Daucus carota HOM05D004673 ORTHO05D005596 1.0e-20 107.1 314 57.3
Actinidia00906 Actinidia chinensis HOM05D004673 ORTHO05D005596 1.4e-20 106.7 198 64.6
Dinv09263 Davidia involucrata HOM05D004673 ORTHO05D005596 2.3e-20 105.9 190 68.4
Haze_22936 Corylus avellana HOM05D004673 ORTHO05D005596 3.0e-20 105.5 212 65.1
QL02p096023 Quercus lobata HOM05D004673 ORTHO05D005596 3.0e-20 105.5 306 59.8
Gorai.007G289600 Gossypium raimondii HOM05D004673 ORTHO05D005596 3.9e-20 105.1 336 54.2
CANSAT11G1431 Cannabis sativa HOM05D004673 ORTHO05D005596 2.6e-19 102.4 320 58.4
Dinv13478 Davidia involucrata HOM05D004673 ORTHO05D005596 3.3e-19 102.1 358 51.4
QL02p095991 Quercus lobata HOM05D004673 ORTHO05D005596 3.3e-19 102.1 308 59.7
DCAR_030979 Daucus carota HOM05D004673 ORTHO05D005596 5.7e-19 101.3 324 45.1
HanXRQChr07g0187551 Helianthus annuus HOM05D004673 ORTHO05D005596 2.2e-18 99.4 150 66.7
Thecc.05G294400 Theobroma cacao HOM05D004673 ORTHO05D005596 2.8e-18 99.0 316 60.1
MELO3C015573.2 Cucumis melo HOM05D004673 ORTHO05D005596 4.8e-18 98.2 325 50.2
COL.COLO4_13599 Corchorus olitorius HOM05D004673 ORTHO05D005596 6.3e-18 97.8 306 63.7
CAN.G1834.13 Capsicum annuum HOM05D004673 ORTHO05D005596 1.1e-17 97.1 315 60.6
Ciclev10024612m.g Citrus clementina HOM05D004673 ORTHO05D005596 1.1e-17 97.1 215 60.0
Sed0024334 Sechium edule HOM05D004673 ORTHO05D005596 1.4e-17 96.7 183 67.8
MBI11_g38090_MAGBIO Magnolia biondii HOM05D004673 ORTHO05D005596 2.4e-17 95.9 318 61.9
CsaV3_1G041620 Cucumis sativus L. HOM05D004673 ORTHO05D005596 4.1e-17 95.1 177 71.2
Hma1.2p1_0589F.1_g184830 Hydrangea macrophylla HOM05D004673 ORTHO05D005596 5.3e-17 94.7 488 49.4
QL08p003602 Quercus lobata HOM05D004673 ORTHO05D005596 7.0e-17 94.4 323 58.8
QL01p003771 Quercus lobata HOM05D004673 ORTHO05D005596 9.1e-17 94.0 322 57.1
ATR0697G215 Amborella trichopoda HOM05D004673 ORTHO05D005596 1.2e-16 93.6 316 61.4
QL01p004552 Quercus lobata HOM05D004673 ORTHO05D005596 2.6e-16 92.4 191 66.0
Gohir.A11G259500 Gossypium hirsutum HOM05D004673 ORTHO05D005596 5.9e-16 91.3 191 63.4
QL08p003638 Quercus lobata HOM05D004673 ORTHO05D005596 1.0e-15 90.5 182 68.7
EL10Ac3g06819 Beta vulgaris HOM05D004673 ORTHO05D005596 1.7e-15 89.7 179 63.7
DCAR_030118 Daucus carota HOM05D004673 ORTHO05D005596 1.7e-15 89.7 86 52.3
Cpa.g.sc1158.1 Carica papaya HOM05D004673 ORTHO05D005596 2.2e-15 89.4 177 67.2
C09p23810 Brassica napus HOM05D004673 ORTHO05D005596 2.9e-15 89.0 99 47.5
CARHR253220 Cardamine hirsuta HOM05D004673 ORTHO05D005596 6.5e-15 87.8 306 60.1
QL01p004480 Quercus lobata HOM05D004673 ORTHO05D005596 8.5e-15 87.4 187 64.7
CARHR253280 Cardamine hirsuta HOM05D004673 ORTHO05D005596 1.5e-14 86.7 188 53.7
BcaB04g19351 Brassica carinata HOM05D004673 ORTHO05D005596 2.5e-14 85.9 209 59.3
QL01p016358 Quercus lobata HOM05D004673 ORTHO05D005596 2.5e-14 85.9 182 67.0
Lj1P522T31 Lonicera japonica HOM05D004673 ORTHO05D005596 3.2e-14 85.5 77 54.5
Ciclev10018053m.g Citrus clementina HOM05D004673 ORTHO05D005596 7.2e-14 84.3 94 43.6
BcaC04g22073 Brassica carinata HOM05D000897 ORTHO05D000716 9.4e-14 84.0 73 54.8
Aa31LG5G14520 Aethionema arabicum HOM05D004673 ORTHO05D005596 1.6e-13 83.2 87 50.6
Thhalv10027707m.g Eutrema salsugineum HOM05D004673 ORTHO05D005596 1.6e-13 83.2 73 58.9
HPP92_013964 Vanilla planifolia HOM05D004673 ORTHO05D005596 1.6e-13 83.2 183 60.7
Aa31LG5G14510 Aethionema arabicum HOM05D004673 ORTHO05D005596 2.1e-13 82.8 208 58.7
DCAR_030115 Daucus carota HOM05D004673 ORTHO05D005596 2.1e-13 82.8 151 78.1
CARHR253250 Cardamine hirsuta HOM05D004673 ORTHO05D005596 3.6e-13 82.0 196 60.2
QL01p016345 Quercus lobata HOM05D004673 ORTHO05D005596 3.6e-13 82.0 182 66.5
GSVIVG01025484001 Vitis vinifera HOM05D004673 ORTHO05D005596 3.6e-13 82.0 112 43.8
COL.COLO4_13601 Corchorus olitorius HOM05D000750 ORTHO05D000714 6.1e-13 81.3 58 63.8
QL01p004727 Quercus lobata HOM05D004673 ORTHO05D005596 6.1e-13 81.3 65 63.1
Lj2P776T43 Lonicera japonica HOM05D004673 ORTHO05D005596 1.0e-12 80.5 69 56.5
Cpa.g.c34637 Carica papaya HOM05D004673 ORTHO05D005596 1.4e-12 80.1 177 65.0
QL01p004071 Quercus lobata HOM05D004673 ORTHO05D005596 1.4e-12 80.1 187 58.3
GSVIVG01025482001 Vitis vinifera HOM05D004673 ORTHO05D005596 1.4e-12 80.1 65 58.5
Carub.0006s3213 Capsella rubella HOM05D004673 ORTHO05D005596 1.8e-12 79.7 193 39.4
DCAR_030116 Daucus carota HOM05D004673 ORTHO05D005596 4.0e-12 78.6 94 46.8
THA.LOC104816064 Tarenaya hassleriana HOM05D004673 ORTHO05D005596 4.0e-12 78.6 84 47.6
HPP92_013962 Vanilla planifolia HOM05D004673 ORTHO05D005596 4.0e-12 78.6 305 57.4
C03p40670 Brassica napus HOM05D004673 ORTHO05D005596 5.2e-12 78.2 185 64.3
Manes.03G086903 Manihot esculenta HOM05D004673 ORTHO05D005596 5.2e-12 78.2 89 46.1
BolC3t16332H Brassica oleracea HOM05D004673 ORTHO05D005596 6.7e-12 77.8 180 65.0
THA.LOC104816063 Tarenaya hassleriana HOM05D004673 ORTHO05D005596 1.5e-11 76.6 161 70.2
A09p18980 Brassica napus HOM05D004673 ORTHO05D005596 2.0e-11 76.3 67 53.7
BraA09t37516Z Brassica rapa HOM05D004673 ORTHO05D005596 2.0e-11 76.3 67 53.7
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 2.0e-11 76.3 228 47.8
AUR62032689 Chenopodium quinoa HOM05D000750 ORTHO05D000714 2.6e-11 75.9 330 37.9
CARHR078050 Cardamine hirsuta HOM05D004673 ORTHO05D005596 4.4e-11 75.1 293 59.0
DCAR_030125 Daucus carota HOM05D004673 ORTHO05D005596 4.4e-11 75.1 153 74.5
BcaB07g31134 Brassica carinata HOM05D004673 ORTHO05D005596 5.7e-11 74.7 311 55.3
Carub.0003s0318 Capsella rubella HOM05D004673 ORTHO05D005596 7.4e-11 74.3 289 52.2
AT4G04220 Arabidopsis thaliana HOM05D004673 ORTHO05D005596 9.7e-11 73.9 314 52.5
HanXRQChr07g0187531 Helianthus annuus HOM05D004673 ORTHO05D005596 2.2e-10 72.8 72 55.6
GSVIVG01025477001 Vitis vinifera HOM05D004673 ORTHO05D005596 2.2e-10 72.8 72 54.2
CARHR253180 Cardamine hirsuta HOM05D004673 ORTHO05D005596 3.7e-10 72.0 311 50.8
COL.COLO4_13600 Corchorus olitorius HOM05D004673 ORTHO05D005596 3.7e-10 72.0 54 61.1
CARHR253240 Cardamine hirsuta HOM05D004673 ORTHO05D005596 4.8e-10 71.6 172 57.0
CARHR253290 Cardamine hirsuta HOM05D004673 ORTHO05D005596 4.8e-10 71.6 136 79.4
DCAR_030119 Daucus carota HOM05D004673 ORTHO05D005596 8.2e-10 70.9 65 52.3
CAN.G282.19 Capsicum annuum HOM05D000053 ORTHO05D000035 3.1e-09 68.9 143 33.6
DCAR_030113 Daucus carota HOM05D004673 ORTHO05D005596 4.1e-09 68.6 87 44.8
MBI11_g31285_MAGBIO Magnolia biondii HOM05D004673 ORTHO05D005596 5.3e-09 68.2 61 54.1
AL3G13020 Arabidopsis lyrata HOM05D004673 ORTHO05D005596 7.0e-09 67.8 59 55.9
CARHR253370 Cardamine hirsuta HOM05D004673 ORTHO05D005596 7.0e-09 67.8 176 61.4
Dinv09265 Davidia involucrata HOM05D004673 ORTHO05D005596 9.1e-09 67.4 66 51.5
Sp3g02900 Schrenkiella parvula HOM05D004673 ORTHO05D005596 9.1e-09 67.4 182 63.7
AL6G47840 Arabidopsis lyrata HOM05D004673 ORTHO05D005596 1.6e-08 66.6 223 52.9
BolC9t55304H Brassica oleracea HOM05D004673 ORTHO05D005596 1.6e-08 66.6 176 42.0
Dinv00553 Davidia involucrata HOM05D004673 ORTHO05D005596 1.6e-08 66.6 67 52.2
Solyc03g082780.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 1.6e-08 66.6 138 31.2
GSVIVG01025479001 Vitis vinifera HOM05D004673 ORTHO05D005596 2.6e-08 65.9 77 48.1
BraA03t12522Z Brassica rapa HOM05D004673 ORTHO05D005596 3.5e-08 65.5 185 61.1
HPP92_013963 Vanilla planifolia HOM05D004673 ORTHO05D005596 3.5e-08 65.5 179 59.2
CAN.G575.10 Capsicum annuum HOM05D000053 ORTHO05D000035 4.5e-08 65.1 140 30.0
QL01p004463 Quercus lobata HOM05D004673 ORTHO05D005596 5.9e-08 64.7 154 63.6
BcaC01g04387 Brassica carinata HOM05D004673 ORTHO05D005596 1.3e-07 63.5 160 40.0
QL07p015672 Quercus lobata HOM05D004673 ORTHO05D005596 1.3e-07 63.5 172 43.6
Cc01_g08290 Coffea canephora HOM05D000053 ORTHO05D000035 1.7e-07 63.2 141 29.8
Lj1P521T7 Lonicera japonica HOM05D004673 ORTHO05D005596 2.2e-07 62.8 51 54.9
Cc01_g08250 Coffea canephora HOM05D000053 ORTHO05D000035 2.9e-07 62.4 136 32.4
A03p33470 Brassica napus HOM05D004673 ORTHO05D005596 5.0e-07 61.6 185 60.0
CAN.G282.99 Capsicum annuum HOM05D000053 ORTHO05D000035 5.0e-07 61.6 141 28.4
Eucgr.E02541 Eucalyptus grandis HOM05D000053 ORTHO05D000035 5.0e-07 61.6 160 28.8
TPR.G31824 Trifolium pratense HOM05D000053 ORTHO05D000035 6.5e-07 61.2 147 27.9
CAN.G282.24 Capsicum annuum HOM05D000053 ORTHO05D000035 8.5e-07 60.8 140 30.0
TAR636G1224 Trochodendron aralioides HOM05D000053 ORTHO05D000448 8.5e-07 60.8 180 58.9
COL.COLO4_25516 Corchorus olitorius HOM05D000053 ORTHO05D000035 1.1e-06 60.5 145 32.4
Eucgr.B00686 Eucalyptus grandis HOM05D000053 ORTHO05D000035 1.1e-06 60.5 146 29.5
QL08p055485 Quercus lobata HOM05D004673 ORTHO05D005596 1.1e-06 60.5 51 52.9
CARHR253200 Cardamine hirsuta HOM05D004673 ORTHO05D005596 1.5e-06 60.1 46 63.0
Manes.10G026700 Manihot esculenta HOM05D000053 ORTHO05D000035 1.9e-06 59.7 175 57.1
TAR636G3089 Trochodendron aralioides HOM05D000053 ORTHO05D000448 1.9e-06 59.7 62 46.8
Peaxi162Scf00306g00043 Petunia axillaris HOM05D000053 ORTHO05D000035 3.2e-06 58.9 141 28.4
BcaB08g34403 Brassica carinata HOM05D000094 ORTHO05D032433 4.2e-06 58.5 97 37.1
CAN.G282.28 Capsicum annuum HOM05D000004 ORTHO05D000035 4.2e-06 58.5 154 27.9
THA.LOC104821143 Tarenaya hassleriana HOM05D004673 ORTHO05D005596 4.2e-06 58.5 87 42.5
GSVIVG01025485001 Vitis vinifera HOM05D004673 ORTHO05D005596 4.2e-06 58.5 68 52.9
CSS0007708 Camellia sinensis var. sinensis HOM05D000053 ORTHO05D000035 5.5e-06 58.2 144 29.2
Dinv33559 Davidia involucrata HOM05D000071 ORTHO05D000029 5.5e-06 58.2 101 40.6
Eucgr.C04421 Eucalyptus grandis HOM05D000311 ORTHO05D000183 5.5e-06 58.2 145 27.6
Eucgr.G03111 Eucalyptus grandis HOM05D000053 ORTHO05D000035 5.5e-06 58.2 201 51.7
Gorai.005G083800 Gossypium raimondii HOM05D000071 ORTHO05D003524 5.5e-06 58.2 91 39.6
CAN.G575.11 Capsicum annuum HOM05D001165 ORTHO05D001347 7.2e-06 57.8 141 27.7
Sabra12G0005800 Salix brachista HOM05D000482 ORTHO05D000349 7.2e-06 57.8 145 31.0
Sabra12G0009400 Salix brachista HOM05D000482 ORTHO05D000349 7.2e-06 57.8 141 29.8
Solyc01g098370.1 Solanum lycopersicum HOM05D000053 ORTHO05D000035 7.2e-06 57.8 68 42.6
Actinidia26343 Actinidia chinensis HOM05D000311 ORTHO05D000183 9.4e-06 57.4 83 43.4
CAN.G208.71 Capsicum annuum HOM05D000053 ORTHO05D000035 9.4e-06 57.4 92 37.0
CAN.G575.7 Capsicum annuum HOM05D000053 ORTHO05D000035 9.4e-06 57.4 147 29.9
Peaxi162Scf00299g00016 Petunia axillaris HOM05D000053 ORTHO05D000035 9.4e-06 57.4 136 29.4


User provided reference genes

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