Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 8.8e-232 806.6 409 100.0
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 1.1e-157 560.5 364 77.5
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 2.5e-149 532.7 419 70.2
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 2.1e-116 423.3 411 57.9
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 3.0e-115 419.5 375 58.7
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 6.5e-110 401.7 420 53.3
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.2e-109 399.4 365 58.1
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 4.2e-109 399.1 379 55.4
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 1.6e-108 397.1 376 56.6
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 2.6e-106 389.8 372 55.6
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 7.5e-106 388.3 365 57.5
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 2.8e-105 386.3 374 55.3
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 1.9e-101 373.6 383 52.2
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 1.2e-100 370.9 422 50.2
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 2.7e-100 369.8 335 57.0
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 2.7e-100 369.8 378 51.6
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 4.7e-100 369.0 373 52.5
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 8.0e-100 368.2 369 53.9
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 2.6e-98 363.2 371 50.7
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 4.4e-98 362.5 377 52.8
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 2.8e-97 359.8 375 52.0
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 4.8e-97 359.0 382 51.0
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 8.3e-97 358.2 371 50.1
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 8.3e-97 358.2 390 50.8
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 2.4e-96 356.7 392 50.3
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 3.1e-96 356.3 373 53.9
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 3.1e-96 356.3 373 53.9
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 9.1e-96 354.8 373 50.4
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 1.2e-95 354.4 367 51.8
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 5.9e-95 352.1 369 52.3
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 7.7e-95 351.7 365 51.5
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 1.0e-94 351.3 391 49.1
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 3.8e-94 349.4 419 49.9
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 1.5e-93 347.4 419 50.1
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 1.9e-93 347.1 376 51.3
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 1.9e-93 347.1 365 51.0
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 2.5e-93 346.7 370 50.5
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 3.3e-93 346.3 373 51.7
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 3.3e-93 346.3 404 48.3
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 1.2e-92 344.4 389 46.8
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 1.2e-92 344.4 365 50.7
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 2.1e-92 343.6 373 49.9
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 3.6e-92 342.8 369 50.9
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 3.0e-91 339.7 375 49.1
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 6.8e-91 338.6 410 50.7
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 8.9e-91 338.2 363 51.2
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 1.2e-90 337.8 363 48.8
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.6e-90 336.7 421 48.2
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 3.4e-90 336.3 357 52.7
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 4.4e-90 335.9 388 47.4
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 5.7e-90 335.5 399 46.4
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 9.8e-90 334.7 397 45.6
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 3.7e-89 332.8 355 50.1
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 1.8e-88 330.5 423 46.3
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 1.6e-87 327.4 380 49.5
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 2.0e-87 327.0 353 50.4
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 2.7e-87 326.6 419 47.7
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.9e-86 323.2 421 47.3
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 1.1e-85 321.2 388 44.8
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 3.3e-85 319.7 355 50.4
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 3.3e-85 319.7 363 50.4
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 4.3e-85 319.3 375 45.9
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 9.5e-85 318.2 355 49.6
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.2e-84 317.8 355 50.1
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 1.2e-84 317.8 419 46.5
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.8e-84 316.6 356 50.0
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.5e-82 310.8 355 49.6
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 1.3e-81 307.8 377 46.7
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 1.3e-81 307.8 369 47.2
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 4.9e-81 305.8 316 50.0
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 1.4e-80 304.3 364 48.6
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 3.5e-79 299.7 360 48.9
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 4.6e-79 299.3 358 47.2
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 7.8e-79 298.5 371 47.4
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 7.8e-79 298.5 371 47.4
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 1.3e-78 297.7 365 43.8
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 3.0e-78 296.6 362 47.5
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 3.0e-78 296.6 357 47.1
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 8.6e-78 295.0 362 47.2
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 1.9e-77 293.9 373 47.7
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 5.6e-77 292.4 371 46.9
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 8.9e-75 285.0 319 49.8
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 8.9e-75 285.0 330 47.0
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 3.4e-74 283.1 407 42.8
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 7.5e-74 282.0 361 45.4
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 1.7e-73 280.8 370 44.6
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 8.6e-70 268.5 312 50.0
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.1e-69 268.1 362 45.0
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 1.6e-68 264.2 299 48.5
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 4.7e-68 262.7 374 43.6
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 7.6e-66 255.4 359 42.9
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 9.2e-64 248.4 241 56.8
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 9.2e-64 248.4 241 56.8
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 7.8e-63 245.4 291 46.0
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 2.8e-60 236.9 244 55.3
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 8.1e-60 235.3 280 45.7
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 4.0e-59 233.0 294 46.9
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 4.9e-57 226.1 373 41.8
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 6.0e-55 219.2 369 40.9
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 1.3e-54 218.0 372 37.1
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 2.4e-43 180.6 229 43.2
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 1.8e-38 164.5 376 32.2
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 9.6e-37 158.7 126 61.1
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 9.6e-37 158.7 240 42.1
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 9.6e-37 158.7 126 61.1
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 1.1e-35 155.2 226 43.4
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 6.5e-33 146.0 173 49.1
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 7.9e-31 139.0 115 59.1
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 3.9e-30 136.7 391 28.9
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 7.4e-29 132.5 196 46.4
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 1.3e-28 131.7 145 48.3
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 3.4e-26 123.6 146 49.3
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 4.5e-26 123.2 148 49.3
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.3e-25 121.7 131 51.9
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 2.5e-24 117.5 305 33.1
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 1.4e-19 101.7 338 29.0


User provided reference genes

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