Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4302 Erigeron canadensis HOM05D004439 ORTHO05D005670 1.7e-268 928.7 445 100.0
Lsat_1_v5_gn_6_12240 Lactuca sativa HOM05D004439 ORTHO05D005670 4.6e-210 734.6 429 82.8
Duzib205G1996 Durio zibethinus HOM05D004439 ORTHO05D005670 2.1e-202 709.1 447 74.7
HanXRQChr06g0184201 Helianthus annuus HOM05D004439 ORTHO05D005670 2.3e-201 705.7 443 76.7
HanXRQChr05g0138501 Helianthus annuus HOM05D004439 ORTHO05D005670 1.5e-200 703.0 443 76.3
Peaxi162Scf00074g01028 Petunia axillaris HOM05D004439 ORTHO05D005670 2.5e-200 702.2 442 74.7
Dinv38840 Davidia involucrata HOM05D004439 ORTHO05D005670 3.3e-200 701.8 450 74.7
Thecc.03G296500 Theobroma cacao HOM05D004439 ORTHO05D005670 7.4e-200 700.7 451 74.9
Duzib084G1213 Durio zibethinus HOM05D004439 ORTHO05D005670 2.4e-198 695.7 454 73.6
CSS0017274 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 9.0e-198 693.7 451 72.9
CSS0021285 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 9.0e-198 693.7 451 72.9
vmacro13901 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 1.2e-197 693.3 451 73.2
Cc08_g15970 Coffea canephora HOM05D004439 ORTHO05D005670 3.4e-197 691.8 448 72.1
Gorai.008G253800 Gossypium raimondii HOM05D004439 ORTHO05D005670 5.9e-197 691.0 447 74.3
Nitab4.5_0001231g0030 Nicotiana tabacum HOM05D004439 ORTHO05D005670 5.9e-197 691.0 452 73.0
MBI07_g27257_MAGBIO Magnolia biondii HOM05D004439 ORTHO05D005670 7.7e-197 690.6 454 73.3
Sopen08g030490 Solanum pennellii HOM05D004439 ORTHO05D005670 7.7e-197 690.6 449 72.4
GSVIVG01019518001 Vitis vinifera HOM05D004439 ORTHO05D005670 7.7e-197 690.6 426 75.8
Gohir.D12G237200 Gossypium hirsutum HOM05D004439 ORTHO05D005670 1.0e-196 690.3 447 74.5
COL.COLO4_10686 Corchorus olitorius HOM05D004439 ORTHO05D005670 2.2e-196 689.1 461 71.6
Cfa023584 Carpinus fangiana HOM05D004439 ORTHO05D005670 3.8e-196 688.3 455 72.7
TAR629G1063 Trochodendron aralioides HOM05D004439 ORTHO05D005670 1.1e-195 686.8 450 71.6
CAN.G532.113 Capsicum annuum HOM05D004439 ORTHO05D005670 1.4e-195 686.4 449 72.2
Potri.003G104700 Populus trichocarpa HOM05D004439 ORTHO05D005670 1.4e-195 686.4 445 72.8
Atru.chr9.2010 Acer truncatum HOM05D004439 ORTHO05D005670 1.9e-195 686.0 446 72.9
Solyc08g082200.3 Solanum lycopersicum HOM05D004439 ORTHO05D005670 1.2e-194 683.3 449 71.7
Ciclev10020115m.g Citrus clementina HOM05D004439 ORTHO05D005670 2.1e-194 682.6 447 72.9
Prupe.5G117700 Prunus persica HOM05D004439 ORTHO05D005670 4.6e-194 681.4 443 74.0
CANSAT21G0267 Cannabis sativa HOM05D004439 ORTHO05D005670 1.4e-193 679.9 453 71.7
Manes.11G128600 Manihot esculenta HOM05D004439 ORTHO05D005670 1.4e-193 679.9 448 72.8
CiPaw.11G122200 Carya illinoinensis HOM05D004439 ORTHO05D005670 6.7e-193 677.6 457 71.6
Nn2g14269 Nelumbo nucifera HOM05D004439 ORTHO05D005670 6.7e-193 677.6 450 72.7
EL10Ac5g12905 Beta vulgaris HOM05D004439 ORTHO05D005670 1.5e-192 676.4 458 71.4
Eucgr.E00854 Eucalyptus grandis HOM05D004439 ORTHO05D005670 2.5e-192 675.6 452 69.9
TWI81G0104 Tripterygium wilfordii HOM05D004439 ORTHO05D005670 4.8e-191 671.4 455 71.4
SalBow1G1193 Salvia bowleyana HOM05D004439 ORTHO05D005670 4.1e-190 668.3 448 71.2
MD06G1105400 Malus domestica HOM05D004439 ORTHO05D005670 5.3e-190 667.9 427 74.2
CsaV3_5G039570 Cucumis sativus L. HOM05D004439 ORTHO05D005670 6.9e-190 667.5 445 70.8
Sed0005226 Sechium edule HOM05D004439 ORTHO05D005670 2.2e-188 662.5 446 69.5
Sc01g0010250 Simmondsia chinensis HOM05D004439 ORTHO05D005670 3.8e-188 661.8 458 69.0
MSTRG.1809 Avicennia marina HOM05D004439 ORTHO05D005670 6.5e-188 661.0 452 69.7
DCAR_006321 Daucus carota HOM05D004439 ORTHO05D005670 6.5e-188 661.0 447 71.4
vmacro05785 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 8.5e-188 660.6 445 71.7
Lalb_Chr16g0376971 Lupinus albus HOM05D004439 ORTHO05D005670 5.5e-187 657.9 440 72.7
Rhsim07G0082800 Rhododendron simsii HOM05D004439 ORTHO05D005670 2.7e-186 655.6 433 72.3
QL02p030851 Quercus lobata HOM05D004439 ORTHO05D005670 1.8e-185 652.9 446 71.1
ATR0320G020 Amborella trichopoda HOM05D004439 ORTHO05D005670 2.6e-184 649.0 451 68.7
RcHm_v2.0_Chr7g0195041 Rosa chinensis HOM05D004439 ORTHO05D005670 3.3e-184 648.7 441 71.7
Aqoxy5G04196 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 9.7e-184 647.1 453 70.0
Migut.A00663 Erythranthe guttata HOM05D004439 ORTHO05D005670 6.3e-183 644.4 447 69.1
Lj1g0018659 Lotus japonicus HOM05D004439 ORTHO05D005670 1.8e-182 642.9 422 71.6
FvH4_5g04460 Fragaria vesca HOM05D004439 ORTHO05D005670 4.1e-182 641.7 420 72.9
Psat5g147560 Pisum sativum HOM05D004439 ORTHO05D005670 7.0e-182 641.0 423 71.9
arahy.Tifrunner.gnm1.ann1.FA9VAL Arachis hypogaea HOM05D004439 ORTHO05D005670 9.1e-182 640.6 455 67.9
arahy.Tifrunner.gnm1.ann1.X9M6Z3 Arachis hypogaea HOM05D004439 ORTHO05D005670 1.2e-181 640.2 455 67.9
arahy.Tifrunner.gnm1.ann1.URL0E3 Arachis hypogaea HOM05D004439 ORTHO05D005670 1.5e-181 639.8 455 67.7
Lj8C209T4 Lonicera japonica HOM05D004439 ORTHO05D005670 3.5e-181 638.6 391 77.5
Hund11394 Selenicereus undatus HOM05D004439 ORTHO05D005670 4.5e-181 638.3 455 69.0
FAN13G1146 Fragaria x ananassa HOM05D004439 ORTHO05D005670 5.0e-180 634.8 421 72.4
Ca_15083_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 2.5e-179 632.5 424 71.2
FAN18G4375 Fragaria x ananassa HOM05D004439 ORTHO05D005670 3.2e-179 632.1 457 68.1
Glyma.02G286600 Glycine max HOM05D004439 ORTHO05D005670 4.2e-179 631.7 432 70.4
AUR62019828 Chenopodium quinoa HOM05D004439 ORTHO05D005670 1.6e-178 629.8 462 67.3
FAN04G2433 Fragaria x ananassa HOM05D004439 ORTHO05D005670 2.7e-178 629.0 441 69.2
FAN08G0613 Fragaria x ananassa HOM05D004439 ORTHO05D005670 3.6e-178 628.6 442 69.2
Phvul.009G207100 Phaseolus vulgaris HOM05D004439 ORTHO05D005670 1.0e-177 627.1 432 69.7
unitig_92.g28124 Utricularia gibba HOM05D004439 ORTHO05D005670 1.0e-177 627.1 441 67.6
VMungo0647G0731 Vigna mungo HOM05D004439 ORTHO05D005670 1.0e-177 627.1 427 70.3
FAN18G2355 Fragaria x ananassa HOM05D004439 ORTHO05D005670 6.7e-177 624.4 458 67.7
AUR62010830 Chenopodium quinoa HOM05D004439 ORTHO05D005670 8.8e-177 624.0 457 67.0
Medtr3g062490 Medicago truncatula HOM05D004439 ORTHO05D005670 2.0e-176 622.9 432 69.7
arahy.Tifrunner.gnm1.ann1.B833UN Arachis hypogaea HOM05D004439 ORTHO05D005670 3.3e-176 622.1 470 64.9
Cpa.g.sc79.44 Carica papaya HOM05D004439 ORTHO05D005670 2.2e-175 619.4 435 69.9
SGA_v2.0_scaffold305G47954 Striga asiatica HOM05D004439 ORTHO05D005670 1.4e-174 616.7 488 63.9
Ca_15072_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 5.3e-174 614.8 450 66.7
Aqoxy1G01152 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 7.7e-173 610.9 405 72.8
AL7G47340 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.3e-172 610.1 449 65.3
Carub.0007s3348 Capsella rubella HOM05D004439 ORTHO05D005670 3.2e-171 605.5 448 64.3
CARHR212680 Cardamine hirsuta HOM05D004439 ORTHO05D005670 4.2e-171 605.1 452 64.4
CDE02G4298 Ceratophyllum demersum HOM05D004439 ORTHO05D005670 5.5e-171 604.7 457 64.6
THA.LOC104809335 Tarenaya hassleriana HOM05D004439 ORTHO05D005670 7.2e-171 604.4 466 62.9
Thhalv10027750m.g Eutrema salsugineum HOM05D004439 ORTHO05D005670 1.2e-170 603.6 451 65.2
Sp7g00230 Schrenkiella parvula HOM05D004439 ORTHO05D005670 1.6e-170 603.2 452 64.4
AT5G41880 Arabidopsis thaliana HOM05D004439 ORTHO05D005670 3.6e-170 602.1 449 64.1
Actinidia27332 Actinidia chinensis HOM05D004439 ORTHO05D005670 6.1e-170 601.3 447 66.2
A04p15000 Brassica napus HOM05D004439 ORTHO05D005670 9.7e-168 594.0 456 63.2
BraA04t17145Z Brassica rapa HOM05D004439 ORTHO05D005670 1.7e-167 593.2 456 62.9
Sabra03G0071700 Salix brachista HOM05D004439 ORTHO05D005670 6.3e-167 591.3 477 62.9
PSO384G1647 Papaver somniferum HOM05D004439 ORTHO05D005670 8.3e-167 590.9 456 64.7
Ah.12g052480 Amaranthus hybridus HOM05D004439 ORTHO05D005670 1.4e-166 590.1 460 63.3
BcaB02g07872 Brassica carinata HOM05D004439 ORTHO05D005670 3.1e-166 589.0 455 63.1
BcaC02g08908 Brassica carinata HOM05D004439 ORTHO05D005670 1.2e-165 587.0 453 62.9
C04p49290 Brassica napus HOM05D004439 ORTHO05D005670 1.0e-164 583.9 455 62.9
BolC4t26514H Brassica oleracea HOM05D004439 ORTHO05D005670 1.0e-164 583.9 455 62.9
Lj8A194T41 Lonicera japonica HOM05D004439 ORTHO05D005670 2.2e-164 582.8 381 74.3
PSO339G0633 Papaver somniferum HOM05D004439 ORTHO05D005670 2.2e-164 582.8 452 64.6
C06p20300 Brassica napus HOM05D004439 ORTHO05D005670 3.2e-163 578.9 451 62.5
Oeu063530.1 Olea europaea HOM05D004439 ORTHO05D005670 3.2e-163 578.9 388 71.1
Nitab4.5_0008661g0010 Nicotiana tabacum HOM05D004439 ORTHO05D005670 7.2e-163 577.8 433 65.6
Gohir.A12G236000 Gossypium hirsutum HOM05D004439 ORTHO05D005670 3.6e-162 575.5 361 76.5
HPP92_001766 Vanilla planifolia HOM05D004439 ORTHO05D005670 1.2e-160 570.5 426 64.6
BcaB06g27677 Brassica carinata HOM05D004439 ORTHO05D005670 8.3e-159 564.3 445 61.8
Mapoly0061s0010 Marchantia polymorpha HOM05D004439 ORTHO05D005670 2.4e-158 562.8 434 59.7
HPP92_001588 Vanilla planifolia HOM05D004439 ORTHO05D005670 3.5e-157 558.9 395 67.1
DCAR_029884 Daucus carota HOM05D004439 ORTHO05D005670 4.5e-157 558.5 376 72.3
A07p20990 Brassica napus HOM05D004439 ORTHO05D005670 1.3e-151 540.4 479 57.2
Rhsim09G0008900 Rhododendron simsii HOM05D004439 ORTHO05D005670 1.3e-151 540.4 465 59.4
ClCG08G001530 Citrullus lanatus HOM05D004439 ORTHO05D005670 1.1e-150 537.3 528 53.8
BcaC08g44563 Brassica carinata HOM05D004439 ORTHO05D005670 5.4e-150 535.0 399 64.4
Aa31LG9G280 Aethionema arabicum HOM05D004439 ORTHO05D005670 1.6e-149 533.5 409 63.3
AagrBONN_evm.TU.Sc2ySwM_117.2781 Anthoceros agrestis HOM05D004439 ORTHO05D005670 5.0e-148 528.5 424 58.3
Pp3c9_1070 Physcomitrium patens HOM05D004439 ORTHO05D005670 7.3e-147 524.6 417 57.8
CBR_g30932 Chara braunii HOM05D004439 ORTHO05D005670 1.6e-146 523.5 430 56.7
CBR_g51004 Chara braunii HOM05D004439 ORTHO05D005670 1.0e-145 520.8 437 55.6
Haze_08623 Corylus avellana HOM05D004439 ORTHO05D005670 3.3e-139 499.2 339 71.1
arahy.Tifrunner.gnm1.ann1.4X43I0 Arachis hypogaea HOM05D004439 ORTHO05D005670 1.2e-133 480.7 350 67.1
TPR.G13893 Trifolium pratense HOM05D004439 ORTHO05D005670 7.8e-125 451.4 419 54.7
BcaNung06856 Brassica carinata HOM05D004439 ORTHO05D005670 1.7e-124 450.3 474 52.1
SHI03128 Sapria himalayana HOM05D004439 ORTHO05D005670 3.5e-117 426.0 455 50.3
SMO361G0219 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 4.3e-115 419.1 348 58.6
Zm00001eb346380 Zea mays HOM05D004439 ORTHO05D005670 4.3e-115 419.1 286 69.9
SMO361G0316 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 1.6e-114 417.2 347 59.1
CSS0041217 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 3.1e-113 412.9 468 51.1
Glyma.14G028200 Glycine max HOM05D004439 ORTHO05D005670 3.4e-112 409.5 291 69.4
Cre07.g312350 Chlamydomonas reinhardtii HOM05D004439 ORTHO05D005670 4.9e-111 405.6 409 48.9
Lj2A169G40 Lonicera japonica HOM05D004439 ORTHO05D005670 1.3e-108 397.5 331 62.8
MD14G1127500 Malus domestica HOM05D004439 ORTHO05D005670 1.9e-107 393.7 263 71.9
arahy.Tifrunner.gnm1.ann1.JNH9P6 Arachis hypogaea HOM05D004439 ORTHO05D005670 7.6e-104 381.7 414 51.4
Cfa025390 Carpinus fangiana HOM05D004439 ORTHO05D005670 9.6e-91 338.2 410 42.7
RcHm_v2.0_Chr6g0245381 Rosa chinensis HOM05D004439 ORTHO05D005670 5.0e-87 325.9 200 76.0
PRCOL_00003494 Prasinoderma coloniale HOM05D004439 ORTHO05D005670 3.2e-86 323.2 414 41.3
RcHm_v2.0_Chr5g0068871 Rosa chinensis HOM05D004439 ORTHO05D005670 4.8e-74 282.7 275 56.4
RcHm_v2.0_Chr6g0245391 Rosa chinensis HOM05D004439 ORTHO05D005670 1.1e-73 281.6 213 65.7
TPR.G191 Trifolium pratense HOM05D004439 ORTHO05D005670 5.0e-63 246.1 175 69.1
MELO3C027184.2 Cucumis melo HOM05D004439 ORTHO05D005670 8.5e-55 218.8 119 79.8
PSO063G0793 Papaver somniferum HOM05D004439 ORTHO05D005670 5.2e-52 209.5 190 56.8
SEGI_14966 Sequoiadendron giganteum HOM05D004439 ORTHO05D005670 5.4e-49 199.5 187 54.5
TPR.G9934 Trifolium pratense HOM05D004439 ORTHO05D005670 7.7e-48 195.7 216 50.9
MELO3C031246.2 Cucumis melo HOM05D004439 ORTHO05D005670 3.1e-41 173.7 154 57.1
AL3G52130 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 7.7e-40 169.1 256 41.4
AL1G55640 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 6.6e-39 166.0 254 41.7
PGSC0003DMG400012290 Solanum tuberosum HOM05D004439 ORTHO05D005670 4.0e-36 156.8 229 40.6
MD14G1127600 Malus domestica HOM05D004439 ORTHO05D005670 2.4e-33 147.5 105 65.7
TPR.G9939 Trifolium pratense HOM05D004439 ORTHO05D005670 3.2e-33 147.1 195 44.1
TPR.G3794 Trifolium pratense HOM05D004439 ORTHO05D005670 2.7e-32 144.1 98 69.4
Os05g0358200 Oryza sativa ssp. japonica HOM05D004439 ORTHO05D005670 1.2e-29 135.2 105 58.1
AL2G23180 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.4e-25 121.7 254 35.8
AL1G44430 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.9e-22 111.3 85 62.4
Lj2A169G39 Lonicera japonica HOM05D004439 ORTHO05D005670 2.3e-20 104.4 71 67.6
MD06G1072700 Malus domestica HOM05D004439 ORTHO05D005670 1.1e-17 95.5 60 73.3
SEGI_35904 Sequoiadendron giganteum HOM05D004439 ORTHO05D000007 2.7e-16 90.9 135 37.0
TPR.G22107 Trifolium pratense HOM05D004439 ORTHO05D005670 1.7e-15 88.2 70 62.9
Actinidia27324 Actinidia chinensis HOM05D004439 ORTHO05D005670 9.9e-11 72.4 36 88.9
Actinidia27323 Actinidia chinensis HOM05D004439 ORTHO05D005670 2.9e-10 70.9 73 53.4
Actinidia27321 Actinidia chinensis HOM05D004439 ORTHO05D005670 1.1e-06 58.9 38 65.8
Actinidia22721 Actinidia chinensis HOM05D004439 ORTHO05D057326 2.5e-06 57.8 75 46.7


User provided reference genes

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