Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 3.6e-216 754.6 372 100.0
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 4.4e-137 491.9 373 67.6
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 2.7e-131 472.6 341 68.9
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 2.2e-112 409.8 334 60.8
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 1.1e-108 397.5 294 63.9
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 1.5e-108 397.1 310 61.6
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 1.4e-106 390.6 331 59.8
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 3.0e-106 389.4 313 59.7
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 1.2e-105 387.5 349 57.3
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 2.0e-105 386.7 320 58.1
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 9.8e-105 384.4 300 61.0
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 1.3e-104 384.0 300 61.0
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 2.9e-104 382.9 315 59.4
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 6.4e-104 381.7 349 56.4
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 1.1e-103 380.9 354 54.0
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 1.4e-103 380.6 347 55.6
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 1.8e-103 380.2 368 54.1
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 2.4e-103 379.8 352 55.7
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 2.4e-103 379.8 336 57.4
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 3.2e-103 379.4 280 65.4
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 4.1e-103 379.0 347 55.0
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 4.1e-103 379.0 332 57.5
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 1.2e-102 377.5 297 60.9
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 1.6e-102 377.1 307 60.9
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 2.0e-102 376.7 338 55.9
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 3.5e-102 375.9 286 62.9
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 3.5e-102 375.9 318 58.5
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 4.6e-102 375.6 364 53.0
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 7.8e-102 374.8 300 61.3
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 1.0e-101 374.4 299 60.5
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 3.0e-101 372.9 358 54.7
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 3.9e-101 372.5 299 60.5
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 3.9e-101 372.5 277 65.7
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 8.6e-101 371.3 301 60.8
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 1.1e-100 370.9 324 56.2
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 1.1e-100 370.9 324 57.1
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 1.1e-100 370.9 300 60.7
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 1.9e-100 370.2 358 54.5
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 1.9e-100 370.2 299 60.2
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 2.5e-100 369.8 315 58.4
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 2.5e-100 369.8 301 59.8
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 5.6e-100 368.6 299 60.5
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 1.6e-99 367.1 296 61.8
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 1.6e-99 367.1 342 55.3
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 3.6e-99 365.9 344 54.7
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 4.7e-99 365.5 372 53.5
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 8.0e-99 364.8 345 53.9
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 1.0e-98 364.4 364 54.4
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 4.0e-98 362.5 349 53.3
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 5.2e-98 362.1 356 56.2
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 6.8e-98 361.7 296 59.5
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 1.2e-97 360.9 287 62.0
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 1.5e-97 360.5 341 54.8
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 3.4e-97 359.4 296 58.1
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 2.2e-96 356.7 298 58.4
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 1.4e-95 354.0 296 59.5
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 4.6e-94 349.0 328 53.4
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 6.0e-94 348.6 311 55.3
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 7.8e-94 348.2 312 57.4
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 1.3e-93 347.4 324 55.6
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 1.5e-92 344.0 381 52.5
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 2.5e-92 343.2 318 54.4
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 2.5e-92 343.2 342 50.6
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 4.3e-92 342.4 297 56.2
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 5.6e-92 342.0 296 56.4
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 9.5e-92 341.3 308 54.9
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 3.6e-91 339.3 296 55.4
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 4.7e-91 339.0 380 51.8
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 6.2e-91 338.6 307 54.4
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 1.1e-90 337.8 299 56.2
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 1.4e-90 337.4 366 48.6
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 1.8e-90 337.0 344 50.9
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 4.0e-90 335.9 357 49.6
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 6.8e-90 335.1 282 58.9
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 4.4e-89 332.4 323 53.9
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 9.8e-89 331.3 291 56.4
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 2.2e-88 330.1 346 52.3
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 4.9e-88 328.9 344 51.5
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 6.4e-88 328.6 291 56.0
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 6.4e-88 328.6 350 50.6
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 8.3e-88 328.2 354 50.6
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 1.4e-87 327.4 325 52.0
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 5.4e-87 325.5 338 53.8
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 3.3e-84 316.2 238 61.8
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 1.2e-83 314.3 255 58.8
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 1.1e-82 311.2 251 59.8
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 4.1e-79 299.3 277 55.6
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 5.1e-77 292.4 216 63.4
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 2.4e-74 283.5 292 46.9
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 1.5e-73 280.8 319 46.4
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 7.6e-73 278.5 337 46.3
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 8.1e-59 231.9 320 39.4
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 2.2e-56 223.8 317 40.1
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 3.0e-53 213.4 311 37.9
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 4.9e-48 196.1 160 60.6
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 1.9e-47 194.1 377 35.0
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 6.0e-46 189.1 163 56.4
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 1.8e-45 187.6 293 36.2
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 4.1e-42 176.4 170 55.9
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 1.5e-36 157.9 203 47.8
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 1.3e-35 154.8 301 31.2
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.0e-32 145.2 126 60.3
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 1.1e-31 141.7 102 64.7
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 2.7e-30 137.1 105 61.9
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 3.1e-26 123.6 320 28.8
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 4.5e-25 119.8 161 43.5
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.7e-22 110.5 81 65.4
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 3.0e-13 80.5 316 24.7


User provided reference genes

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