Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 5.2e-128 461.1 236 100.0
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 9.6e-106 387.1 214 87.4
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 4.2e-101 371.7 219 83.1
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.0e-99 367.1 214 83.2
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 6.7e-99 364.4 221 81.0
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 7.4e-98 360.9 216 81.5
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 1.6e-97 359.8 221 78.3
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 8.1e-97 357.5 222 77.9
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 8.1e-97 357.5 214 80.4
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 2.4e-96 355.9 216 79.6
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 1.5e-95 353.2 219 79.5
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 2.0e-95 352.8 215 79.1
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 2.0e-95 352.8 217 79.7
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 4.5e-95 351.7 219 78.1
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 7.6e-95 350.9 216 78.7
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 1.0e-94 350.5 221 77.4
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 1.3e-94 350.1 220 78.6
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 1.3e-94 350.1 216 78.7
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 2.9e-94 349.0 219 77.6
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 2.9e-94 349.0 217 77.9
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 4.9e-94 348.2 217 77.9
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 4.9e-94 348.2 217 77.9
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 6.5e-94 347.8 218 77.1
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 8.4e-94 347.4 215 78.6
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 1.9e-93 346.3 216 77.8
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 1.9e-93 346.3 219 75.8
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 1.9e-93 346.3 215 78.1
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 2.5e-93 345.9 218 77.5
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 5.5e-93 344.7 217 77.4
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 2.1e-92 342.8 216 78.7
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 2.7e-92 342.4 217 76.5
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 2.7e-92 342.4 217 78.8
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 3.5e-92 342.0 218 76.6
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 6.0e-92 341.3 216 76.9
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 6.0e-92 341.3 217 76.5
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 7.9e-92 340.9 216 76.9
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 7.9e-92 340.9 216 76.4
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 1.0e-91 340.5 216 77.3
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 1.0e-91 340.5 216 76.4
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 1.3e-91 340.1 216 77.3
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 1.3e-91 340.1 215 78.1
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 1.3e-91 340.1 215 78.1
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 1.3e-91 340.1 218 74.8
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 3.0e-91 339.0 233 73.0
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 3.0e-91 339.0 216 76.9
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 3.9e-91 338.6 211 77.7
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 3.9e-91 338.6 218 76.6
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 3.9e-91 338.6 216 76.9
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 5.1e-91 338.2 219 77.2
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 5.1e-91 338.2 214 76.6
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 5.1e-91 338.2 218 76.6
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 1.1e-90 337.0 216 77.8
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 1.5e-90 336.7 216 75.5
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 1.5e-90 336.7 219 74.4
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 1.5e-90 336.7 220 75.5
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 1.9e-90 336.3 218 76.1
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 1.9e-90 336.3 218 75.2
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 4.3e-90 335.1 216 75.0
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 5.7e-90 334.7 218 74.8
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 9.6e-90 334.0 220 74.1
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 9.6e-90 334.0 219 74.0
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 1.6e-89 333.2 222 73.9
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 1.6e-89 333.2 216 75.5
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 2.1e-89 332.8 219 75.3
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 2.8e-89 332.4 218 75.2
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 4.8e-89 331.6 217 74.2
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 6.2e-89 331.3 217 75.6
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 8.2e-89 330.9 217 75.1
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 1.1e-88 330.5 219 73.5
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 1.1e-88 330.5 214 76.2
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 2.4e-88 329.3 217 74.2
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 2.4e-88 329.3 217 74.2
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 2.4e-88 329.3 216 73.6
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 4.1e-88 328.6 220 74.1
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 5.3e-88 328.2 212 75.5
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 6.9e-88 327.8 218 74.3
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 2.0e-87 326.2 217 73.7
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 2.6e-87 325.9 219 73.5
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 2.6e-87 325.9 219 71.2
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 5.8e-87 324.7 217 73.3
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 1.3e-86 323.6 217 73.3
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 1.3e-86 323.6 217 73.3
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 5.0e-86 321.6 204 77.0
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 8.4e-86 320.9 219 70.8
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 1.4e-85 320.1 211 71.6
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 2.5e-85 319.3 214 75.2
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 4.3e-82 308.5 214 69.2
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 6.3e-81 304.7 217 70.0
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 6.3e-81 304.7 203 73.9
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 6.9e-80 301.2 208 68.8
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 5.9e-79 298.1 220 69.1
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 1.1e-77 293.9 214 67.8
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 1.9e-77 293.1 216 69.9
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 2.5e-77 292.7 184 73.9
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 7.2e-77 291.2 221 66.5
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 9.4e-77 290.8 218 65.6
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 2.1e-76 289.7 205 70.2
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 2.2e-73 279.6 194 71.6
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 4.8e-73 278.5 217 61.8
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.8e-72 276.6 210 65.2
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 6.5e-70 268.1 192 66.1
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 1.9e-69 266.5 220 60.5
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 2.5e-69 266.2 189 70.4
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 1.1e-66 257.3 142 85.2
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 1.1e-64 250.8 152 78.3
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 5.3e-64 248.4 149 79.2
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.9e-61 240.0 262 52.3
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 2.5e-61 239.6 151 74.8
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 8.2e-57 224.6 178 59.6
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 3.5e-55 219.2 149 72.5
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 4.8e-49 198.7 194 50.5
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 6.1e-44 181.8 100 86.0
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 1.8e-35 153.7 209 44.5
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.5e-26 124.0 99 60.6
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 7.5e-26 121.7 80 68.8
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 8.3e-25 118.2 89 64.0
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 5.4e-24 115.5 62 82.3
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 9.2e-24 114.8 87 62.1
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 2.5e-21 106.7 66 74.2
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 3.0e-14 83.2 69 63.8
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 6.6e-14 82.0 144 39.6
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 8.4e-09 65.1 161 28.0
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 1.1e-08 64.7 161 27.3
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 1.1e-08 64.7 161 27.3
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 2.4e-08 63.5 161 27.3
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 1.2e-07 61.2 170 27.6
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 3.5e-07 59.7 161 27.3
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 3.5e-07 59.7 161 27.3
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 4.6e-07 59.3 161 27.3
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 6.0e-07 58.9 146 26.7
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 1.7e-06 57.4 41 58.5
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 3.0e-06 56.6 146 28.1
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 3.0e-06 56.6 146 28.1
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 3.9e-06 56.2 161 26.1
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 5.1e-06 55.8 146 26.0
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 8.6e-06 55.1 142 28.9
MELO3C013239.2 Cucumis melo HOM05D000031 ORTHO05D000030 8.6e-06 55.1 32 75.0
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 8.6e-06 55.1 142 28.2


User provided reference genes

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