Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 5.1e-159 564.3 274 100.0
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 9.4e-129 463.8 290 79.0
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 3.3e-126 455.3 281 79.0
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 4.0e-95 352.1 267 65.9
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 4.1e-92 342.0 275 65.5
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 9.2e-92 340.9 282 65.2
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 9.2e-92 340.9 279 65.9
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 2.0e-91 339.7 280 63.2
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 5.9e-91 338.2 274 64.2
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 7.8e-91 337.8 293 61.4
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 1.0e-90 337.4 238 70.2
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 1.3e-90 337.0 262 67.6
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 1.7e-90 336.7 275 63.3
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 1.7e-90 336.7 280 63.6
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 2.3e-90 336.3 273 62.6
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 2.9e-90 335.9 273 63.4
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 3.8e-90 335.5 280 62.1
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 6.6e-90 334.7 297 60.6
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 1.9e-89 333.2 218 73.9
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.9e-89 333.2 272 63.6
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 3.3e-89 332.4 261 64.8
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 3.3e-89 332.4 285 60.7
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 5.6e-89 331.6 280 63.2
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 7.3e-89 331.3 282 61.7
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 1.2e-88 330.5 280 60.7
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 1.6e-88 330.1 281 62.3
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 2.8e-88 329.3 280 61.8
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 6.1e-88 328.2 276 61.6
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 8.0e-88 327.8 238 68.5
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 8.0e-88 327.8 301 55.8
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 1.0e-87 327.4 271 61.3
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 1.0e-87 327.4 271 61.3
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 1.0e-87 327.4 271 61.3
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 1.0e-87 327.4 184 83.2
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 1.4e-87 327.0 282 63.1
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 1.8e-87 326.6 286 61.9
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 1.8e-87 326.6 183 83.1
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 4.0e-87 325.5 285 61.1
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 4.0e-87 325.5 285 60.0
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 6.8e-87 324.7 290 61.4
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 2.0e-86 323.2 280 59.6
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 2.6e-86 322.8 272 62.9
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 4.4e-86 322.0 222 71.6
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 7.5e-86 321.2 275 61.8
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 9.8e-86 320.9 238 67.6
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 1.3e-85 320.5 236 69.5
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 2.2e-85 319.7 243 67.5
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 2.9e-85 319.3 275 60.0
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 4.9e-85 318.5 279 58.8
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 4.9e-85 318.5 227 67.8
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 6.4e-85 318.2 283 61.1
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 8.3e-85 317.8 233 67.0
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 3.2e-84 315.8 223 69.5
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 4.1e-84 315.5 236 66.1
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 5.4e-84 315.1 314 55.4
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 7.0e-84 314.7 183 81.4
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 1.2e-83 313.9 242 64.9
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.0e-82 310.8 213 71.4
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 3.0e-82 309.3 229 68.1
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 5.0e-82 308.5 180 80.6
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 6.6e-82 308.1 199 74.9
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 1.9e-81 306.6 228 66.7
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 3.3e-81 305.8 292 58.2
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 3.3e-81 305.8 275 60.7
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 7.3e-81 304.7 184 78.3
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 2.8e-80 302.8 224 66.5
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 1.4e-79 300.4 274 59.9
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 1.4e-79 300.4 185 77.8
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 3.1e-79 299.3 185 77.3
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 1.2e-78 297.4 192 73.4
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 2.0e-78 296.6 289 55.7
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 2.6e-78 296.2 282 57.1
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 3.4e-78 295.8 277 55.2
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 4.4e-78 295.4 185 76.2
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 5.8e-78 295.0 254 61.4
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 2.4e-76 289.7 283 55.8
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 2.0e-75 286.6 167 80.8
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 8.6e-74 281.2 277 55.2
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 1.6e-72 276.9 259 56.8
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 1.4e-71 273.9 232 60.8
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 5.2e-71 271.9 152 86.2
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 6.8e-71 271.6 207 63.8
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 4.4e-70 268.9 168 75.6
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 6.4e-69 265.0 161 78.9
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 7.1e-68 261.5 152 82.9
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.2e-67 260.8 222 60.8
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 3.5e-67 259.2 157 79.6
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 6.0e-67 258.5 246 55.7
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.3e-66 257.3 170 69.4
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 8.6e-66 254.6 273 52.4
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 9.2e-60 234.6 147 76.2
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 3.9e-58 229.2 214 58.9
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 1.9e-57 226.9 231 52.4
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 4.0e-55 219.2 164 63.4
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 1.2e-54 217.6 201 52.2
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 1.2e-54 217.6 292 47.3
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 3.4e-54 216.1 196 54.6
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 3.8e-53 212.6 249 45.4
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 4.9e-53 212.2 211 50.7
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 2.4e-52 209.9 236 50.4
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 2.8e-48 196.4 181 51.4
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 2.0e-46 190.3 214 51.4
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 1.7e-45 187.2 239 51.0
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 1.4e-44 184.1 195 52.3
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 5.6e-41 172.2 195 46.7
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 1.4e-39 167.5 278 41.0
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 9.9e-38 161.4 275 37.5
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.8e-37 159.5 222 42.3
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.4e-36 157.5 110 68.2
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 2.4e-36 156.8 238 39.1
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 4.3e-33 146.0 93 72.0
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 1.3e-29 134.4 177 40.7
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 6.9e-23 112.1 69 78.3
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 3.9e-10 69.7 40 72.5
Nitab4.5_0000001g0050 Nicotiana tabacum HOM05D006942 ORTHO05D008737 2.8e-08 63.5 133 31.6
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 4.8e-08 62.8 65 43.1
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 4.1e-07 59.7 50 58.0


User provided reference genes

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