Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4070 Erigeron canadensis HOM05D004366 ORTHO05D005058 1.4e-105 386.3 203 100.0
HanXRQChr08g0210471 Helianthus annuus HOM05D004366 ORTHO05D005058 2.2e-90 335.9 200 86.5
HanXRQChr12g0362541 Helianthus annuus HOM05D004366 ORTHO05D005058 7.8e-88 327.4 200 84.5
Lsat_1_v5_gn_8_52741 Lactuca sativa HOM05D004366 ORTHO05D005058 8.9e-84 313.9 200 79.5
Rhsim12G0062000 Rhododendron simsii HOM05D004366 ORTHO05D005058 9.8e-75 283.9 192 74.0
CAN.G473.145 Capsicum annuum HOM05D004366 ORTHO05D005058 1.3e-74 283.5 195 73.8
Peaxi162Scf00026g03112 Petunia axillaris HOM05D004366 ORTHO05D005058 1.3e-74 283.5 194 73.2
Lj3C1038T15 Lonicera japonica HOM05D004366 ORTHO05D005058 3.7e-74 282.0 195 73.8
Manes.01G186800 Manihot esculenta HOM05D004366 ORTHO05D005058 1.4e-73 280.0 195 73.3
Nitab4.5_0000141g0240 Nicotiana tabacum HOM05D004366 ORTHO05D005058 3.2e-73 278.9 193 73.1
MD13G1073400 Malus domestica HOM05D004366 ORTHO05D005058 4.1e-73 278.5 195 71.3
Solyc01g010810.4 Solanum lycopersicum HOM05D004366 ORTHO05D005058 4.1e-73 278.5 196 70.9
Sopen01g006640 Solanum pennellii HOM05D004366 ORTHO05D005058 4.1e-73 278.5 196 70.9
CSS0003416 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 5.4e-73 278.1 196 73.0
PGSC0003DMG400006558 Solanum tuberosum HOM05D004366 ORTHO05D005058 5.4e-73 278.1 195 71.3
Thhalv10019150m.g Eutrema salsugineum HOM05D004366 ORTHO05D005058 7.1e-73 277.7 201 68.7
Actinidia31203 Actinidia chinensis HOM05D004366 ORTHO05D005058 9.2e-73 277.3 195 71.3
RcHm_v2.0_Chr4g0440001 Rosa chinensis HOM05D004366 ORTHO05D005058 1.2e-72 276.9 193 72.0
CSS0021388 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 2.1e-72 276.2 196 72.4
SalBow2G0488 Salvia bowleyana HOM05D004366 ORTHO05D005058 6.0e-72 274.6 195 72.3
Sp5g24810 Schrenkiella parvula HOM05D004366 ORTHO05D005058 7.8e-72 274.2 200 67.5
Cc11_g13140 Coffea canephora HOM05D004366 ORTHO05D005058 1.7e-71 273.1 195 71.3
FvH4_4g31510 Fragaria vesca HOM05D004366 ORTHO05D005058 1.7e-71 273.1 197 69.0
FAN12G0862 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.7e-71 273.1 197 69.0
Prupe.1G272700 Prunus persica HOM05D004366 ORTHO05D005058 3.0e-71 272.3 195 69.7
QL03p064520 Quercus lobata HOM05D004366 ORTHO05D005058 3.9e-71 271.9 194 71.1
Sc11g0001840 Simmondsia chinensis HOM05D004366 ORTHO05D005058 3.9e-71 271.9 196 69.9
MD16G1074700 Malus domestica HOM05D004366 ORTHO05D005058 6.6e-71 271.2 195 69.7
Nn4g23131 Nelumbo nucifera HOM05D004366 ORTHO05D005058 6.6e-71 271.2 193 72.0
Atru.chr11.1817 Acer truncatum HOM05D004366 ORTHO05D005058 8.6e-71 270.8 199 67.8
ClCG05G024360 Citrullus lanatus HOM05D004366 ORTHO05D005058 8.6e-71 270.8 195 69.7
CsaV3_5G032600 Cucumis sativus L. HOM05D004366 ORTHO05D005058 1.1e-70 270.4 195 69.7
Lalb_Chr04g0256161 Lupinus albus HOM05D004366 ORTHO05D005058 1.1e-70 270.4 195 71.3
A07p31430 Brassica napus HOM05D004366 ORTHO05D005058 3.3e-70 268.9 195 68.2
BraA07t30778Z Brassica rapa HOM05D004366 ORTHO05D005058 3.3e-70 268.9 195 68.2
MELO3C012087.2 Cucumis melo HOM05D004366 ORTHO05D005058 3.3e-70 268.9 195 69.7
BcaC08g46415 Brassica carinata HOM05D004366 ORTHO05D005058 4.3e-70 268.5 199 67.3
C06p36720 Brassica napus HOM05D004366 ORTHO05D005058 4.3e-70 268.5 195 67.7
BolC6t38782H Brassica oleracea HOM05D004366 ORTHO05D005058 4.3e-70 268.5 195 67.7
BolC6t39421H Brassica oleracea HOM05D004366 ORTHO05D005058 4.3e-70 268.5 199 67.3
Sed0027317 Sechium edule HOM05D004366 ORTHO05D005058 5.6e-70 268.1 195 68.7
Eucgr.B03429 Eucalyptus grandis HOM05D004366 ORTHO05D005058 7.3e-70 267.7 199 68.3
FAN17G2550 Fragaria x ananassa HOM05D004366 ORTHO05D005058 7.3e-70 267.7 197 67.5
CARHR062670 Cardamine hirsuta HOM05D004366 ORTHO05D005058 1.2e-69 266.9 196 67.9
FAN15G0746 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.2e-69 266.9 197 68.0
C06p43460 Brassica napus HOM05D004366 ORTHO05D005058 1.6e-69 266.5 199 66.8
BcaB03g14744 Brassica carinata HOM05D004366 ORTHO05D005058 2.1e-69 266.2 199 66.3
A07p36060 Brassica napus HOM05D004366 ORTHO05D005058 2.1e-69 266.2 199 66.3
BraA07t31186Z Brassica rapa HOM05D004366 ORTHO05D005058 2.1e-69 266.2 199 66.3
Carub.0002s1634 Capsella rubella HOM05D004366 ORTHO05D005058 2.1e-69 266.2 194 69.1
SGA_v2.0_scaffold20G09275 Striga asiatica HOM05D004366 ORTHO05D005058 2.8e-69 265.8 194 68.6
AT1G69680 Arabidopsis thaliana HOM05D004366 ORTHO05D005058 3.6e-69 265.4 194 68.6
TWI12G0004 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 3.6e-69 265.4 195 69.7
Aqoxy3G03355 Aquilegia oxysepala HOM05D004366 ORTHO05D005058 6.2e-69 264.6 192 68.8
AL2G28850 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 6.2e-69 264.6 194 68.6
BcaB03g15490 Brassica carinata HOM05D004366 ORTHO05D005058 6.2e-69 264.6 195 67.7
CiPaw.06G083500 Carya illinoinensis HOM05D004366 ORTHO05D005058 8.1e-69 264.2 194 69.1
FAN24G0452 Fragaria x ananassa HOM05D004366 ORTHO05D005058 2.3e-68 262.7 197 66.0
Cpa.g.sc128.8 Carica papaya HOM05D004366 ORTHO05D005058 3.1e-68 262.3 193 69.4
FAN27G2895 Fragaria x ananassa HOM05D004366 ORTHO05D005058 3.1e-68 262.3 198 67.7
Ciclev10032771m.g Citrus clementina HOM05D004366 ORTHO05D005058 4.0e-68 261.9 196 67.9
Glyma.01G045700 Glycine max HOM05D004366 ORTHO05D005058 4.0e-68 261.9 191 69.1
Migut.L01306 Erythranthe guttata HOM05D004366 ORTHO05D005058 5.2e-68 261.5 194 67.5
Glyma.02G106000 Glycine max HOM05D004366 ORTHO05D005058 6.8e-68 261.2 191 68.6
EL10Ac6g13190 Beta vulgaris HOM05D004366 ORTHO05D005058 8.9e-68 260.8 193 66.8
Thecc.02G350500 Theobroma cacao HOM05D004366 ORTHO05D005058 8.9e-68 260.8 191 68.6
Aa31LG4G11100 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.2e-67 260.4 198 65.2
Lj2g0005379 Lotus japonicus HOM05D004366 ORTHO05D005058 1.2e-67 260.4 191 69.1
Phvul.002G086500 Phaseolus vulgaris HOM05D004366 ORTHO05D005058 1.5e-67 260.0 191 69.6
THA.LOC104822115 Tarenaya hassleriana HOM05D004366 ORTHO05D005058 2.0e-67 259.6 195 66.7
Medtr8g463620 Medicago truncatula HOM05D004366 ORTHO05D005058 2.6e-67 259.2 194 67.0
Medtr5g039690 Medicago truncatula HOM05D004366 ORTHO05D005058 4.4e-67 258.5 194 67.0
PSO339G1196 Papaver somniferum HOM05D004366 ORTHO05D005058 5.8e-67 258.1 193 66.8
Sp3g28750 Schrenkiella parvula HOM05D004366 ORTHO05D005058 5.8e-67 258.1 198 64.6
PSO384G0235 Papaver somniferum HOM05D004366 ORTHO05D005058 7.6e-67 257.7 193 67.4
Ca_04775_v3 Cicer arietinum L. HOM05D004366 ORTHO05D005058 9.9e-67 257.3 191 68.6
COL.COLO4_22987 Corchorus olitorius HOM05D004366 ORTHO05D005058 1.7e-66 256.5 191 68.6
CSS0022805 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 2.2e-66 256.1 191 69.1
Gohir.D13G074000 Gossypium hirsutum HOM05D004366 ORTHO05D005058 2.9e-66 255.8 196 63.3
FvH4_2g13310 Fragaria vesca HOM05D004366 ORTHO05D005058 4.9e-66 255.0 198 65.2
Gohir.A13G073900 Gossypium hirsutum HOM05D004366 ORTHO05D005058 4.9e-66 255.0 196 64.3
Gorai.013G084600 Gossypium raimondii HOM05D004366 ORTHO05D005058 4.9e-66 255.0 196 63.3
MBI02_g23682_MAGBIO Magnolia biondii HOM05D004366 ORTHO05D005058 6.4e-66 254.6 195 65.1
unitig_22.g6909 Utricularia gibba HOM05D004366 ORTHO05D005058 6.4e-66 254.6 198 64.6
Psat0s2341g0040 Pisum sativum HOM05D004366 ORTHO05D005058 1.1e-65 253.8 191 68.1
Hund05888 Selenicereus undatus HOM05D004366 ORTHO05D005058 1.1e-65 253.8 191 64.9
TWI53G1314 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 4.1e-65 251.9 195 66.2
Oeu028302.2 Olea europaea HOM05D004366 ORTHO05D005058 7.1e-65 251.1 195 68.2
Nitab4.5_0005950g0010 Nicotiana tabacum HOM05D004366 ORTHO05D005058 6.0e-64 248.1 194 68.0
AUR62026617 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.0e-63 247.3 193 66.3
ATR0564G205 Amborella trichopoda HOM05D004366 ORTHO05D005058 1.7e-63 246.5 191 65.4
PGR102G1003 Punica granatum HOM05D004366 ORTHO05D005058 3.0e-63 245.7 195 64.6
arahy.Tifrunner.gnm1.ann1.5V6A51 Arachis hypogaea HOM05D004366 ORTHO05D005058 6.6e-63 244.6 209 60.3
BcaC08g45875 Brassica carinata HOM05D004366 ORTHO05D005058 6.6e-63 244.6 198 63.1
AUR62034912 Chenopodium quinoa HOM05D004366 ORTHO05D005058 6.6e-63 244.6 181 68.0
PSO675G4203 Papaver somniferum HOM05D004366 ORTHO05D005058 8.6e-63 244.2 193 64.8
AUR62005764 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.1e-62 243.8 181 68.0
Os04g0459600 Oryza sativa ssp. japonica HOM05D004366 ORTHO05D005058 2.1e-61 239.6 199 60.3
Aa31sc15G10 Aethionema arabicum HOM05D004366 ORTHO05D005058 2.4e-60 236.1 179 66.5
Haze_12025 Corylus avellana HOM05D004366 ORTHO05D005058 4.0e-60 235.3 194 63.4
Oeu013622.3 Olea europaea HOM05D004366 ORTHO05D005058 5.2e-60 235.0 197 62.9
Sabra13G0046200 Salix brachista HOM05D004366 ORTHO05D005058 8.9e-60 234.2 189 64.6
VMungo1215G0984 Vigna mungo HOM05D004366 ORTHO05D005058 8.9e-60 234.2 168 72.0
CANSAT54G1616 Cannabis sativa HOM05D004366 ORTHO05D005058 1.5e-59 233.4 193 63.7
AL7G43580 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 4.4e-59 231.9 176 67.0
arahy.Tifrunner.gnm1.ann1.QXP3RB Arachis hypogaea HOM05D004366 ORTHO05D005058 9.9e-59 230.7 177 63.8
SEGI_03925 Sequoiadendron giganteum HOM05D004366 ORTHO05D005058 1.7e-58 229.9 193 58.5
Zm00001eb080830 Zea mays HOM05D004366 ORTHO05D005058 2.2e-58 229.6 190 61.6
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 8.4e-58 227.6 177 64.4
CANSAT25G1390 Cannabis sativa HOM05D004366 ORTHO05D005058 4.2e-57 225.3 193 61.1
Hma1.2p1_0598F.1_g186660 Hydrangea macrophylla HOM05D004366 ORTHO05D005058 4.6e-56 221.9 325 44.0
AUR62028793 Chenopodium quinoa HOM05D004366 ORTHO05D005058 6.0e-56 221.5 193 61.7
Ah.03g135200 Amaranthus hybridus HOM05D004366 ORTHO05D005058 1.7e-55 219.9 191 58.6
Duzib248G1524 Durio zibethinus HOM05D004366 ORTHO05D005058 7.3e-54 214.5 194 57.7
Aa31LG9G5650 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.3e-53 213.8 219 52.5
SGA_v2.0_scaffold53G19387 Striga asiatica HOM05D004366 ORTHO05D005058 1.3e-53 213.8 231 52.4
Potri.013G049900 Populus trichocarpa HOM05D004366 ORTHO05D005058 1.6e-53 213.4 173 64.7
vmacro01244 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 6.2e-53 211.5 245 51.0
GSVIVG01020010001 Vitis vinifera HOM05D004366 ORTHO05D005058 6.2e-53 211.5 189 60.3
Pp3c9_14930 Physcomitrium patens HOM05D004366 ORTHO05D005058 2.9e-50 202.6 198 51.5
FAN22G2022 Fragaria x ananassa HOM05D004366 ORTHO05D005058 4.9e-50 201.8 232 50.4
AagrBONN_evm.TU.Sc2ySwM_344.5131 Anthoceros agrestis HOM05D004366 ORTHO05D005058 1.2e-48 197.2 195 52.8
TPR.G39101 Trifolium pratense HOM05D004366 ORTHO05D005058 3.9e-47 192.2 167 60.5
Cfa008996 Carpinus fangiana HOM05D004366 ORTHO05D005058 1.3e-45 187.2 213 49.8
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 2.6e-43 179.5 225 48.4
DCAR_027406 Daucus carota HOM05D002775 ORTHO05D005058 2.2e-42 176.4 128 70.3
SMO147G0050 Selaginella moellendorffii HOM05D004366 ORTHO05D005058 1.9e-41 173.3 198 49.0
CBR_g17957 Chara braunii HOM05D004366 ORTHO05D005058 3.3e-38 162.5 191 47.6
AagrBONN_evm.TU.Sc2ySwM_362.1786 Anthoceros agrestis HOM05D004366 ORTHO05D005058 7.4e-38 161.4 177 48.0
Dinv16634 Davidia involucrata HOM05D004366 ORTHO05D005058 1.0e-34 151.0 105 71.4
Pp3c15_14240 Physcomitrium patens HOM05D004366 ORTHO05D005058 2.2e-34 149.8 167 48.5
arahy.Tifrunner.gnm1.ann1.4LW61L Arachis hypogaea HOM05D004366 ORTHO05D005058 2.9e-34 149.4 119 60.5
SalBow2G3183 Salvia bowleyana HOM05D004366 ORTHO05D005058 4.9e-34 148.7 116 70.7
TAR629G2773 Trochodendron aralioides HOM05D004366 ORTHO05D005058 1.2e-32 144.1 105 67.6
Mapoly0113s0045 Marchantia polymorpha HOM05D004366 ORTHO05D005058 8.7e-31 137.9 204 41.2
MD11G1061500 Malus domestica HOM05D004366 ORTHO05D005058 1.5e-27 127.1 105 60.0
Lj6A789T49 Lonicera japonica HOM05D004366 ORTHO05D005058 4.2e-25 119.0 89 66.3
MSTRG.695 Avicennia marina HOM05D004366 ORTHO05D005058 9.3e-25 117.9 84 69.0
arahy.Tifrunner.gnm1.ann1.MY0RSE Arachis hypogaea HOM05D004366 ORTHO05D005058 2.1e-24 116.7 103 60.2
MCO13G325 Micromonas commoda HOM05D004366 ORTHO05D005058 6.1e-24 115.2 199 37.2
Potri.019G023800 Populus trichocarpa HOM05D004366 ORTHO05D005058 6.1e-24 115.2 80 67.5
CSS0000370 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 7.9e-24 114.8 71 78.9
CSS0042124 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.0e-23 114.4 71 78.9
CAN.G154.11 Capsicum annuum HOM05D004366 ORTHO05D005058 1.1e-22 110.9 130 50.0
arahy.Tifrunner.gnm1.ann1.J913Y5 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.9e-22 110.2 81 66.7
arahy.Tifrunner.gnm1.ann1.D4KK35 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.1e-20 104.4 126 46.0
Rhsim11G0057700 Rhododendron simsii HOM05D004366 ORTHO05D005058 3.4e-19 99.4 80 68.8
FAN07G2952 Fragaria x ananassa HOM05D004366 ORTHO05D005058 4.5e-19 99.0 72 62.5
PGSC0003DMG400015729 Solanum tuberosum HOM05D004366 ORTHO05D005058 1.7e-18 97.1 103 53.4
BcaC07g37109 Brassica carinata HOM05D004366 ORTHO05D005058 7.2e-17 91.7 74 60.8
C08p04780 Brassica napus HOM05D004366 ORTHO05D005058 1.6e-16 90.5 70 62.9
PRCOL_00002884 Prasinoderma coloniale HOM05D004366 ORTHO05D005058 1.6e-16 90.5 199 31.2
BolC8t47277H Brassica oleracea HOM05D004366 ORTHO05D005058 3.0e-15 86.3 75 60.0
arahy.Tifrunner.gnm1.ann1.8CQ436 Arachis hypogaea HOM05D004366 ORTHO05D005058 3.3e-14 82.8 68 61.8
Lsat_1_v5_gn_1_103541 Lactuca sativa HOM05D004366 ORTHO05D005058 4.3e-14 82.4 102 47.1
arahy.Tifrunner.gnm1.ann1.N9R1JE Arachis hypogaea HOM05D004366 ORTHO05D005058 5.7e-14 82.0 77 55.8
Cre05.g244850 Chlamydomonas reinhardtii HOM05D004366 ORTHO05D005058 3.1e-12 76.3 195 30.3
SalBow1G5797 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.3e-10 70.9 45 71.1
CANSAT54G0841 Cannabis sativa HOM05D001400 ORTHO05D001795 3.8e-10 69.3 48 66.7
arahy.Tifrunner.gnm1.ann1.NKT7G2 Arachis hypogaea HOM05D004366 ORTHO05D005058 5.0e-10 68.9 114 40.4
AUR62028525 Chenopodium quinoa HOM05D004366 ORTHO05D000022 7.9e-08 61.6 47 61.7
PSO339G3282 Papaver somniferum HOM05D000073 ORTHO05D000033 3.3e-06 56.2 48 58.3


User provided reference genes

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