Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4064 Erigeron canadensis HOM05D006544 ORTHO05D008757 1.1e-136 490.0 246 100.0
Lsat_1_v5_gn_6_25121 Lactuca sativa HOM05D006544 ORTHO05D008757 1.5e-98 363.2 226 81.9
HanXRQChr13g0401051 Helianthus annuus HOM05D006544 ORTHO05D008757 5.0e-97 358.2 227 82.4
Dinv37314 Davidia involucrata HOM05D006544 ORTHO05D008757 1.2e-87 327.0 222 73.4
Aa31LG1G21780 Aethionema arabicum HOM05D006544 ORTHO05D008757 5.2e-86 321.6 226 73.0
AL8G27480 Arabidopsis lyrata HOM05D006544 ORTHO05D008757 6.7e-86 321.2 217 74.2
Thhalv10014610m.g Eutrema salsugineum HOM05D006544 ORTHO05D008757 2.6e-85 319.3 216 74.5
Solyc10g084040.2 Solanum lycopersicum HOM05D006544 ORTHO05D008757 1.7e-84 316.6 185 82.7
Sopen10g033470 Solanum pennellii HOM05D006544 ORTHO05D008757 1.7e-84 316.6 185 82.7
CAN.G1169.17 Capsicum annuum HOM05D006544 ORTHO05D008757 2.2e-84 316.2 211 75.8
AT5G52970 Arabidopsis thaliana HOM05D006544 ORTHO05D008757 4.8e-84 315.1 224 72.8
Nitab4.5_0000063g0030 Nicotiana tabacum HOM05D006544 ORTHO05D008757 4.8e-84 315.1 188 81.9
ClCG04G009280 Citrullus lanatus HOM05D006544 ORTHO05D008757 8.2e-84 314.3 204 77.5
Actinidia28904 Actinidia chinensis HOM05D006544 ORTHO05D008757 1.1e-83 313.9 188 79.3
Potri.016G092300 Populus trichocarpa HOM05D006544 ORTHO05D008757 1.1e-83 313.9 202 75.2
Lalb_Chr06g0171711 Lupinus albus HOM05D006544 ORTHO05D008757 1.4e-83 313.5 184 81.0
PGSC0003DMG400010472 Solanum tuberosum HOM05D006544 ORTHO05D008757 1.4e-83 313.5 199 78.4
THA.LOC104816347 Tarenaya hassleriana HOM05D006544 ORTHO05D008757 1.4e-83 313.5 223 70.0
Eucgr.A01683 Eucalyptus grandis HOM05D006544 ORTHO05D008757 2.4e-83 312.8 236 70.3
Gohir.A09G147100 Gossypium hirsutum HOM05D006544 ORTHO05D008757 3.1e-83 312.4 196 77.0
CsaV3_6G039870 Cucumis sativus L. HOM05D006544 ORTHO05D008757 5.3e-83 311.6 217 72.4
DCAR_020819 Daucus carota HOM05D006544 ORTHO05D008757 5.3e-83 311.6 194 77.8
BcaC03g13011 Brassica carinata HOM05D006544 ORTHO05D008757 9.1e-83 310.8 186 81.7
MELO3C024463.2 Cucumis melo HOM05D006544 ORTHO05D008757 1.2e-82 310.5 206 75.7
Gohir.D09G142700 Gossypium hirsutum HOM05D006544 ORTHO05D008757 1.2e-82 310.5 196 76.5
Thecc.05G065700 Theobroma cacao HOM05D006544 ORTHO05D008757 1.2e-82 310.5 224 72.3
TAR636G3123 Trochodendron aralioides HOM05D006544 ORTHO05D008757 1.2e-82 310.5 187 79.1
Carub.0008s1316 Capsella rubella HOM05D006544 ORTHO05D008757 1.6e-82 310.1 216 73.1
SGA_v2.0_scaffold224G42946 Striga asiatica HOM05D006544 ORTHO05D008757 1.6e-82 310.1 186 79.0
Duzib093G0756 Durio zibethinus HOM05D006544 ORTHO05D008757 2.7e-82 309.3 230 70.9
RcHm_v2.0_Chr3g0470171 Rosa chinensis HOM05D006544 ORTHO05D008757 2.7e-82 309.3 217 73.7
Sed0018427 Sechium edule HOM05D006544 ORTHO05D008757 2.7e-82 309.3 205 74.6
CiPaw.09G172700 Carya illinoinensis HOM05D006544 ORTHO05D008757 3.5e-82 308.9 215 71.2
Migut.L01701 Erythranthe guttata HOM05D006544 ORTHO05D008757 4.5e-82 308.5 198 74.2
GSVIVG01025731001 Vitis vinifera HOM05D006544 ORTHO05D008757 5.9e-82 308.1 204 74.5
Sp6g39380 Schrenkiella parvula HOM05D006544 ORTHO05D008757 7.7e-82 307.8 217 71.9
TWI74G1602 Tripterygium wilfordii HOM05D006544 ORTHO05D008757 1.0e-81 307.4 177 81.4
BcaB05g21832 Brassica carinata HOM05D006544 ORTHO05D008757 1.3e-81 307.0 222 72.1
C02p01030 Brassica napus HOM05D006544 ORTHO05D008757 2.2e-81 306.2 187 81.3
PGR004G0128 Punica granatum HOM05D006544 ORTHO05D008757 2.2e-81 306.2 233 69.1
QL07p043583 Quercus lobata HOM05D006544 ORTHO05D008757 5.0e-81 305.1 204 75.0
BolC2t06093H Brassica oleracea HOM05D006544 ORTHO05D008757 6.5e-81 304.7 187 80.7
FvH4_6g16320 Fragaria vesca HOM05D006544 ORTHO05D008757 6.5e-81 304.7 177 82.5
Sc02g0001640 Simmondsia chinensis HOM05D006544 ORTHO05D008757 6.5e-81 304.7 209 71.8
Peaxi162Scf00311g00059 Petunia axillaris HOM05D006544 ORTHO05D008757 1.5e-80 303.5 233 67.4
Cc06_g04210 Coffea canephora HOM05D006544 ORTHO05D008757 1.9e-80 303.1 174 81.6
Lj5g0006333 Lotus japonicus HOM05D006544 ORTHO05D008757 1.9e-80 303.1 199 76.4
Manes.09G066600 Manihot esculenta HOM05D006544 ORTHO05D008757 1.9e-80 303.1 214 72.4
SalBow5G2848 Salvia bowleyana HOM05D006544 ORTHO05D008757 2.5e-80 302.8 191 75.4
Gorai.006G164200 Gossypium raimondii HOM05D006544 ORTHO05D008757 3.2e-80 302.4 189 77.8
MD12G1113500 Malus domestica HOM05D006544 ORTHO05D008757 3.2e-80 302.4 177 80.2
Ciclev10012670m.g Citrus clementina HOM05D006544 ORTHO05D008757 9.4e-80 300.8 224 67.0
Nitab4.5_0010279g0020 Nicotiana tabacum HOM05D006544 ORTHO05D008757 9.4e-80 300.8 240 65.8
Oeu016983.1 Olea europaea HOM05D006544 ORTHO05D008757 1.2e-79 300.4 233 67.8
Nn2g11585 Nelumbo nucifera HOM05D006544 ORTHO05D008757 2.1e-79 299.7 219 68.9
PSO339G0933 Papaver somniferum HOM05D006544 ORTHO05D008757 2.1e-79 299.7 185 79.5
Phvul.007G219800 Phaseolus vulgaris HOM05D006544 ORTHO05D008757 2.1e-79 299.7 224 69.2
FAN05G5519 Fragaria x ananassa HOM05D006544 ORTHO05D008757 3.6e-79 298.9 181 81.2
COL.COLO4_26969 Corchorus olitorius HOM05D006544 ORTHO05D008757 4.7e-79 298.5 245 64.5
FAN09G3810 Fragaria x ananassa HOM05D006544 ORTHO05D008757 4.7e-79 298.5 223 70.9
Psat6g072960 Pisum sativum HOM05D006544 ORTHO05D008757 4.7e-79 298.5 223 66.8
EL10Ac7g16625 Beta vulgaris HOM05D006544 ORTHO05D008757 8.0e-79 297.7 182 79.1
Glyma.10G056700 Glycine max HOM05D006544 ORTHO05D008757 8.0e-79 297.7 170 83.5
Ca_11495_v3 Cicer arietinum L. HOM05D006544 ORTHO05D008757 1.0e-78 297.4 202 72.8
vmacro07290 Vaccinium macrocarpon HOM05D006544 ORTHO05D008757 1.0e-78 297.4 152 91.4
CANSAT80G1747 Cannabis sativa HOM05D006544 ORTHO05D008757 1.4e-78 297.0 173 80.9
MBI18_g04983_MAGBIO Magnolia biondii HOM05D006544 ORTHO05D008757 1.4e-78 297.0 181 77.3
Medtr1g063350 Medicago truncatula HOM05D006544 ORTHO05D008757 1.4e-78 297.0 186 76.3
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea HOM05D006544 ORTHO05D008757 2.3e-78 296.2 226 67.7
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea HOM05D006544 ORTHO05D008757 2.3e-78 296.2 226 67.7
PSO801G0526 Papaver somniferum HOM05D006544 ORTHO05D008757 6.8e-78 294.7 178 80.3
Cfa017605 Carpinus fangiana HOM05D006544 ORTHO05D008757 8.8e-78 294.3 202 73.3
Aqoxy2G01774 Aquilegia oxysepala HOM05D006544 ORTHO05D008757 1.2e-77 293.9 220 70.9
BraA02t04758Z Brassica rapa HOM05D006544 ORTHO05D008757 1.2e-77 293.9 201 73.6
TPR.G11258 Trifolium pratense HOM05D006544 ORTHO05D008757 1.2e-77 293.9 170 82.4
unitig_578.g16041 Utricularia gibba HOM05D006544 ORTHO05D008757 1.5e-77 293.5 177 76.8
CARHR265950 Cardamine hirsuta HOM05D006544 ORTHO05D008757 2.0e-77 293.1 185 77.3
Lj2A122G33 Lonicera japonica HOM05D006544 ORTHO05D008757 2.6e-77 292.7 155 88.4
VMungo0720G1694 Vigna mungo HOM05D006544 ORTHO05D008757 3.4e-77 292.4 170 81.8
ATR1093G019 Amborella trichopoda HOM05D006544 ORTHO05D008757 5.7e-77 291.6 170 81.2
MSTRG.10320 Avicennia marina HOM05D006544 ORTHO05D008757 9.8e-77 290.8 224 66.1
CDE09G0170 Ceratophyllum demersum HOM05D006544 ORTHO05D008757 9.8e-77 290.8 205 66.3
HPP92_009890 Vanilla planifolia HOM05D006544 ORTHO05D008757 3.7e-76 288.9 229 66.8
FAN14G3080 Fragaria x ananassa HOM05D006544 ORTHO05D008757 9.1e-75 284.3 166 83.1
Zm00001eb088350 Zea mays HOM05D006544 ORTHO05D008757 4.5e-74 282.0 169 78.1
AUR62040358 Chenopodium quinoa HOM05D006544 ORTHO05D008757 1.3e-73 280.4 157 84.1
Ah.15g092510 Amaranthus hybridus HOM05D006544 ORTHO05D008757 2.9e-73 279.3 192 72.9
AUR62042496 Chenopodium quinoa HOM05D006544 ORTHO05D008757 8.5e-73 277.7 201 70.6
Sabra16G0097900 Salix brachista HOM05D006544 ORTHO05D008757 2.3e-70 269.6 278 54.3
SEGI_38453 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 1.5e-69 266.9 168 72.6
Prupe.6G232400 Prunus persica HOM05D006544 ORTHO05D008757 5.7e-69 265.0 185 70.3
Rhsim03G0092100 Rhododendron simsii HOM05D006544 ORTHO05D008757 1.3e-68 263.8 234 59.8
Pp3c13_11800 Physcomitrium patens HOM05D006544 ORTHO05D008757 2.1e-63 246.5 163 71.2
Mapoly0064s0090 Marchantia polymorpha HOM05D006544 ORTHO05D008757 6.1e-63 245.0 170 67.1
SMO118G0079 Selaginella moellendorffii HOM05D006544 ORTHO05D008757 6.8e-62 241.5 143 77.6
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 5.7e-61 238.4 156 75.0
Cpa.g.sc54.75 Carica papaya HOM05D006544 ORTHO05D008757 2.0e-58 229.9 119 89.1
Cre15.g636050 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D008757 8.0e-55 218.0 161 65.2
CBR_g11899 Chara braunii HOM05D006544 ORTHO05D008757 5.2e-54 215.3 177 56.5
SEGI_20985 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 3.4e-53 212.6 119 79.0
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis HOM05D006544 ORTHO05D008757 3.5e-50 202.6 119 75.6
MCO09G250 Micromonas commoda HOM05D006544 ORTHO05D008757 6.6e-49 198.4 178 54.5
PRCOL_00002491 Prasinoderma coloniale HOM05D006544 ORTHO05D008757 1.1e-48 197.6 144 63.2
CSS0000889 Camellia sinensis var. sinensis HOM05D006544 ORTHO05D008757 9.2e-43 177.9 201 52.2
Cpa.g.sc4277.1 Carica papaya HOM05D006544 ORTHO05D008757 1.2e-42 177.6 115 76.5
Cpa.g.sc54.73 Carica papaya HOM05D006544 ORTHO05D008757 1.2e-42 177.6 115 76.5
Os07g0534000 Oryza sativa ssp. japonica HOM05D006544 ORTHO05D008757 2.1e-42 176.8 118 68.6
Lj5g0024591 Lotus japonicus HOM05D006544 ORTHO05D008757 4.6e-42 175.6 94 85.1
Medtr5g037320 Medicago truncatula HOM05D006544 ORTHO05D008757 2.2e-28 130.2 103 65.0
Hund20313 Selenicereus undatus HOM05D006544 ORTHO05D008757 2.3e-25 120.2 73 79.5
HPP92_009894 Vanilla planifolia HOM05D006544 ORTHO05D008757 4.3e-24 115.9 64 81.2
CBR_g20266 Chara braunii HOM05D006544 ORTHO05D021234 3.2e-19 99.8 134 38.8
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis HOM05D006544 ORTHO05D021234 1.0e-17 94.7 126 34.9
Nn2g13777 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.8e-17 94.0 111 52.3
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 2.8e-15 86.7 48 79.2
SEGI_36386 Sequoiadendron giganteum HOM05D006544 ORTHO05D021234 1.1e-14 84.7 128 32.8
HPP92_009893 Vanilla planifolia HOM05D006544 ORTHO05D008757 9.0e-14 81.6 108 51.9
Cpa.g.sc54.74 Carica papaya HOM05D006544 ORTHO05D008757 1.5e-13 80.9 102 48.0
Cre03.g154600 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D021234 1.1e-08 64.7 178 24.2
MCO12G278 Micromonas commoda HOM05D006544 ORTHO05D021234 7.4e-08 62.0 121 27.3


User provided reference genes

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