Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 1.5e-217 759.2 380 100.0
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 2.9e-189 665.2 380 87.1
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 8.6e-189 663.7 378 87.8
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 7.8e-174 614.0 376 79.3
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 1.3e-173 613.2 380 79.5
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 1.5e-172 609.8 379 78.6
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 5.6e-172 607.8 379 78.4
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 3.6e-171 605.1 376 79.5
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 3.6e-171 605.1 384 77.1
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 8.0e-171 604.0 379 77.8
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 1.8e-170 602.8 379 77.3
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 2.3e-170 602.4 379 77.6
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 4.0e-170 601.7 362 81.2
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 4.0e-170 601.7 374 78.6
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 2.0e-169 599.4 373 78.0
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 2.0e-169 599.4 383 77.0
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 2.6e-169 599.0 376 76.6
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 2.6e-169 599.0 379 77.3
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 3.4e-169 598.6 379 77.6
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 3.4e-169 598.6 379 77.6
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 4.4e-169 598.2 377 77.7
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 9.8e-169 597.0 370 80.0
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.7e-168 596.3 370 79.7
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 3.7e-168 595.1 376 75.3
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 6.4e-168 594.3 379 77.8
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 1.1e-167 593.6 378 77.5
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 1.4e-167 593.2 379 77.3
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 1.4e-167 593.2 379 76.5
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 1.4e-167 593.2 382 76.4
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 2.4e-167 592.4 378 77.5
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 3.2e-167 592.0 377 77.2
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 3.2e-167 592.0 384 77.3
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 3.5e-166 588.6 382 76.4
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 6.0e-166 587.8 375 75.2
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 6.0e-166 587.8 380 74.5
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 1.0e-165 587.0 376 76.3
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 1.3e-165 586.6 379 77.0
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 1.3e-165 586.6 375 77.3
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 3.9e-165 585.1 375 76.5
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 3.9e-165 585.1 380 74.5
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 5.0e-165 584.7 378 74.3
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 1.9e-164 582.8 378 75.4
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 1.9e-164 582.8 379 76.8
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 3.3e-164 582.0 378 74.1
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 3.3e-164 582.0 379 75.7
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 4.3e-164 581.6 376 75.3
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 1.2e-163 580.1 383 73.4
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 2.8e-163 578.9 376 75.3
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 3.6e-163 578.6 374 75.4
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 4.7e-163 578.2 377 74.3
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 4.7e-163 578.2 375 74.7
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 1.8e-162 576.2 382 73.6
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 2.3e-162 575.9 377 74.0
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 4.0e-162 575.1 379 74.1
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 5.2e-162 574.7 378 73.8
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 6.8e-162 574.3 378 73.0
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 6.8e-162 574.3 374 76.2
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.5e-161 573.2 381 74.3
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 3.4e-161 572.0 371 75.7
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 3.4e-161 572.0 378 72.8
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 5.8e-161 571.2 380 71.8
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 9.9e-161 570.5 382 75.1
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 1.3e-160 570.1 379 73.4
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 1.3e-160 570.1 382 73.0
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 1.7e-160 569.7 377 73.7
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 2.9e-160 568.9 381 73.8
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 2.9e-160 568.9 379 73.4
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 6.4e-160 567.8 378 72.8
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 4.1e-159 565.1 382 71.7
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 9.2e-159 563.9 381 74.0
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 1.6e-158 563.1 402 68.9
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 2.1e-158 562.8 386 73.3
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 2.1e-158 562.8 378 73.5
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 3.5e-158 562.0 382 71.7
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.1e-156 557.0 381 73.0
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 1.2e-155 553.5 383 70.8
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 1.6e-155 553.1 377 71.9
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 2.1e-155 552.7 380 70.3
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 2.1e-155 552.7 381 72.4
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 3.6e-155 552.0 378 72.2
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 3.6e-155 552.0 382 70.4
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 3.6e-155 552.0 383 70.8
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 8.1e-155 550.8 384 71.1
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 8.9e-154 547.4 383 70.0
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 1.5e-153 546.6 379 73.6
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 4.4e-153 545.0 376 71.8
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 1.9e-151 539.7 383 69.5
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 3.2e-151 538.9 383 69.2
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 3.2e-151 538.9 383 69.2
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 4.6e-150 535.0 383 68.4
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 4.6e-150 535.0 383 68.4
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 6.0e-150 534.6 378 69.6
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 7.8e-150 534.3 375 70.1
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 1.5e-148 530.0 382 68.8
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 6.9e-146 521.2 379 67.5
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 1.5e-145 520.0 374 71.4
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 1.2e-142 510.4 361 69.5
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 7.8e-142 507.7 355 69.9
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 3.9e-141 505.4 313 78.3
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 2.8e-139 499.2 345 72.8
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 1.3e-136 490.3 377 63.1
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 1.9e-132 476.5 361 62.0
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 3.1e-122 442.6 309 72.8
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 1.8e-106 390.2 376 52.9
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 1.0e-104 384.4 320 60.6
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 1.1e-103 380.9 379 50.9
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 2.5e-103 379.8 364 52.5
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 1.6e-102 377.1 362 52.5
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.5e-97 360.5 360 51.9
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 3.5e-97 359.4 236 75.8
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 1.2e-94 350.9 385 49.9
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 7.0e-82 308.5 308 52.3
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 3.8e-80 302.8 374 45.5
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 4.2e-79 299.3 335 45.7
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 8.6e-56 221.9 136 75.7
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 5.1e-40 169.5 104 77.9
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 1.5e-39 167.9 98 76.5
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 8.1e-38 162.2 236 44.1
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.1e-29 135.2 83 80.7
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 5.3e-29 132.9 83 79.5
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 2.2e-27 127.5 262 35.9
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 1.9e-26 124.4 89 71.9
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.6e-25 121.3 268 35.8
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.5e-23 114.8 73 76.7
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 2.5e-23 114.0 83 73.5
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 3.3e-23 113.6 347 28.5
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.4e-13 80.9 73 60.3
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 4.5e-12 76.6 117 40.2
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 1.3e-11 75.1 49 71.4
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 8.4e-11 72.4 46 73.9


User provided reference genes

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