Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 0.0e+00 1304.3 716 100.0
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 4.0e-171 605.9 802 50.7
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 2.7e-167 593.2 707 54.7
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 9.3e-136 488.4 736 44.8
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 3.2e-120 436.8 748 40.0
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 4.8e-108 396.4 757 39.9
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 6.3e-108 396.0 630 41.1
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 6.5e-105 386.0 624 41.0
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 2.5e-104 384.0 763 37.1
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 7.2e-104 382.5 530 44.2
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 5.7e-101 372.9 930 33.4
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 8.2e-100 369.0 675 38.8
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 7.7e-98 362.5 670 37.3
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 1.7e-97 361.3 806 34.0
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 7.9e-95 352.4 622 37.9
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 1.4e-94 351.7 672 37.1
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 1.4e-94 351.7 731 35.6
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 2.3e-94 350.9 739 35.9
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 3.9e-94 350.1 723 37.6
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 5.2e-94 349.7 686 38.0
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 1.1e-93 348.6 678 36.6
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 1.1e-93 348.6 759 36.4
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 2.0e-93 347.8 760 35.0
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 1.7e-92 344.7 619 37.8
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 2.8e-92 344.0 738 35.6
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 8.2e-92 342.4 732 36.1
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 1.1e-91 342.0 721 35.8
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 1.4e-91 341.7 715 36.2
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 4.1e-91 340.1 631 36.9
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 7.0e-91 339.3 639 37.1
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 9.1e-91 339.0 625 39.2
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 2.6e-90 337.4 613 38.7
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 3.5e-90 337.0 618 36.7
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 1.0e-89 335.5 724 35.6
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 1.3e-89 335.1 728 35.7
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 1.3e-89 335.1 728 35.7
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 1.3e-89 335.1 728 35.7
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 1.7e-89 334.7 611 37.5
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 5.0e-89 333.2 618 36.7
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 5.0e-89 333.2 611 38.1
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 1.5e-88 331.6 626 36.3
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 2.5e-88 330.9 740 36.2
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 3.2e-88 330.5 655 36.6
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 1.2e-87 328.6 726 34.6
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.1e-87 327.8 620 37.1
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 2.1e-87 327.8 746 34.3
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 3.6e-87 327.0 741 34.1
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 3.6e-87 327.0 667 37.2
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 1.4e-86 325.1 629 36.6
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 1.8e-86 324.7 627 37.3
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 4.0e-86 323.6 628 35.8
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 5.7e-85 319.7 725 33.8
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 7.5e-85 319.3 751 35.3
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 2.8e-84 317.4 693 35.2
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 6.3e-84 316.2 529 38.6
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 6.3e-84 316.2 738 34.0
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 4.1e-83 313.5 640 35.9
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 4.1e-83 313.5 640 35.9
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 1.6e-82 311.6 490 41.2
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 3.5e-82 310.5 637 37.0
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 5.0e-81 306.6 619 36.0
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 3.2e-80 303.9 678 33.6
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 7.2e-80 302.8 487 39.2
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 7.2e-80 302.8 679 33.6
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 2.1e-79 301.2 737 32.8
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 4.7e-79 300.1 733 36.3
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 2.6e-77 294.3 630 36.7
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 3.4e-77 293.9 750 33.1
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 1.3e-76 292.0 659 34.7
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 1.7e-76 291.6 554 37.5
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 2.2e-76 291.2 653 33.4
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 7.0e-75 286.2 718 33.6
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 1.6e-74 285.0 645 35.7
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 2.7e-74 284.3 637 33.9
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 5.9e-74 283.1 656 34.0
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 7.7e-74 282.7 744 32.8
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 5.0e-73 280.0 741 31.4
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 6.1e-71 273.1 314 50.3
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 1.0e-70 272.3 629 33.9
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 1.3e-68 265.4 726 31.8
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 8.6e-65 252.7 346 44.5
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.2e-63 248.8 392 40.3
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 8.0e-63 246.1 609 34.3
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 4.4e-61 240.4 752 30.1
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 1.1e-56 225.7 648 30.1
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 4.3e-56 223.8 491 33.6
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 3.6e-55 220.7 281 45.2
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 4.0e-54 217.2 276 45.7
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 7.8e-50 203.0 517 30.6
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 2.7e-42 177.9 431 32.3
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 8.1e-39 166.4 232 44.4
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 7.1e-35 153.3 149 57.7
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 3.0e-33 147.9 721 24.5
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 9.6e-32 142.9 196 47.4
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 2.3e-25 121.7 149 49.7
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 5.6e-24 117.1 286 33.6
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.1e-23 115.2 133 48.9
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 3.6e-23 114.4 152 44.7
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 1.4e-22 112.5 209 36.4
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 3.4e-21 107.8 281 33.1
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 2.2e-20 105.1 344 31.1
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.9e-20 104.8 448 28.8
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 5.4e-19 100.5 162 43.8
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 1.5e-16 92.4 261 30.3
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 9.6e-16 89.7 333 27.6
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 1.1e-11 76.3 95 50.5
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 2.4e-11 75.1 214 29.0
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 1.2e-10 72.8 424 24.1
Hma1.2p1_1460F.1_g284990 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 1.0e-09 69.7 155 38.1
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 7.4e-08 63.5 316 25.3
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 6.2e-07 60.5 113 36.3
Mapoly0016s0037 Marchantia polymorpha HOM05D006140 ORTHO05D007834 4.0e-06 57.8 209 23.9


User provided reference genes

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