Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G3941 Erigeron canadensis HOM05D003683 ORTHO05D004143 7.9e-40 166.8 91 100.0
Lsat_1_v5_gn_6_10220 Lactuca sativa HOM05D003683 ORTHO05D004143 4.0e-28 127.9 92 76.1
HanXRQChr09g0246651 Helianthus annuus HOM05D003683 ORTHO05D004143 1.1e-20 103.2 91 68.1
CSS0019244 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 9.7e-14 80.1 86 55.8
Lj2A204T52 Lonicera japonica HOM05D003683 ORTHO05D004143 9.7e-14 80.1 89 52.8
Dinv39058 Davidia involucrata HOM05D003683 ORTHO05D004143 2.8e-13 78.6 85 56.5
Peaxi162Scf00102g01336 Petunia axillaris HOM05D003683 ORTHO05D004143 9.1e-12 73.6 82 56.1
SalBow6G6235 Salvia bowleyana HOM05D003683 ORTHO05D004143 1.2e-11 73.2 75 58.7
CSS0021060 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 1.5e-11 72.8 85 51.8
Haze_09035 Corylus avellana HOM05D003683 ORTHO05D004143 2.0e-11 72.4 71 59.2
Hma1.2p1_0138F.1_g062970 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 2.6e-11 72.0 81 53.1
Oeu064712.1 Olea europaea HOM05D003683 ORTHO05D004143 2.6e-11 72.0 76 59.2
Cfa012041 Carpinus fangiana HOM05D003683 ORTHO05D004143 4.5e-11 71.2 71 59.2
Dinv37740 Davidia involucrata HOM05D003683 ORTHO05D004143 4.5e-11 71.2 85 49.4
Oeu056803.1 Olea europaea HOM05D003683 ORTHO05D004143 4.5e-11 71.2 76 56.6
CAN.G630.45 Capsicum annuum HOM05D003683 ORTHO05D004143 5.9e-11 70.9 81 53.1
Dinv43725 Davidia involucrata HOM05D003683 ORTHO05D004143 5.9e-11 70.9 89 48.3
ClCG05G002130 Citrullus lanatus HOM05D003683 ORTHO05D004143 1.7e-10 69.3 61 60.7
Dinv32390 Davidia involucrata HOM05D003683 ORTHO05D004143 1.7e-10 69.3 87 49.4
Sopen08g003530 Solanum pennellii HOM05D003683 ORTHO05D004143 1.7e-10 69.3 83 59.0
CiPaw.11G145300 Carya illinoinensis HOM05D003683 ORTHO05D004143 3.8e-10 68.2 76 51.3
Potri.014G071200 Populus trichocarpa HOM05D003683 ORTHO05D004143 3.8e-10 68.2 80 51.2
Actinidia14483 Actinidia chinensis HOM05D003683 ORTHO05D004143 5.0e-10 67.8 72 54.2
Hma1.2p1_3528F.1_g336600 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 5.0e-10 67.8 80 55.0
GSVIVG01019925001 Vitis vinifera HOM05D003683 ORTHO05D004143 5.0e-10 67.8 66 57.6
Rhsim11G0007500 Rhododendron simsii HOM05D003683 ORTHO05D004143 6.5e-10 67.4 77 59.7
PGSC0003DMG400003921 Solanum tuberosum HOM05D003683 ORTHO05D004143 6.5e-10 67.4 81 50.6
CiPaw.12G102800 Carya illinoinensis HOM05D003683 ORTHO05D004143 1.1e-09 66.6 81 48.1
Gohir.A12G222400 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.4e-09 66.2 64 59.4
PGSC0003DMG400012487 Solanum tuberosum HOM05D003683 ORTHO05D004143 1.4e-09 66.2 83 56.6
COL.COLO4_23839 Corchorus olitorius HOM05D003683 ORTHO05D004143 1.9e-09 65.9 76 52.6
DCAR_008443 Daucus carota HOM05D003683 ORTHO05D004143 1.9e-09 65.9 72 51.4
Solyc08g079690.4 Solanum lycopersicum HOM05D003683 ORTHO05D004143 1.9e-09 65.9 84 50.0
Gohir.A03G010200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 2.5e-09 65.5 83 50.6
Gohir.D03G159600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 2.5e-09 65.5 83 50.6
Gorai.003G167900 Gossypium raimondii HOM05D003683 ORTHO05D004143 2.5e-09 65.5 83 50.6
Potri.002G149600 Populus trichocarpa HOM05D003683 ORTHO05D004143 2.5e-09 65.5 81 51.9
Hund11555 Selenicereus undatus HOM05D003683 ORTHO05D004143 2.5e-09 65.5 87 47.1
Sopen08g028050 Solanum pennellii HOM05D003683 ORTHO05D004143 2.5e-09 65.5 84 48.8
Gohir.D11G086200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 3.2e-09 65.1 76 52.6
Lsat_1_v5_gn_3_5041 Lactuca sativa HOM05D003683 ORTHO05D004143 3.2e-09 65.1 83 50.6
Atru.chr9.1472 Acer truncatum HOM05D003683 ORTHO05D004143 5.5e-09 64.3 64 54.7
Manes.02G031900 Manihot esculenta HOM05D003683 ORTHO05D004143 5.5e-09 64.3 85 48.2
Gohir.A11G081600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 7.2e-09 63.9 76 52.6
Gorai.008G241000 Gossypium raimondii HOM05D003683 ORTHO05D004143 7.2e-09 63.9 64 57.8
Manes.01G071300 Manihot esculenta HOM05D003683 ORTHO05D004143 7.2e-09 63.9 85 49.4
TWI60G0451 Tripterygium wilfordii HOM05D003683 ORTHO05D004143 9.4e-09 63.5 83 49.4
vmacro00217 Vaccinium macrocarpon HOM05D003683 ORTHO05D004143 9.4e-09 63.5 74 55.4
Thhalv10001694m.g Eutrema salsugineum HOM05D003683 ORTHO05D004143 1.2e-08 63.2 70 51.4
Gohir.A12G102100 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.2e-08 63.2 66 57.6
Gorai.008G114600 Gossypium raimondii HOM05D003683 ORTHO05D004143 1.2e-08 63.2 82 50.0
MELO3C005596.2 Cucumis melo HOM05D003683 ORTHO05D004143 1.6e-08 62.8 76 48.7
Duzib133G0707 Durio zibethinus HOM05D003683 ORTHO05D004143 2.1e-08 62.4 80 51.2
QL12p015617 Quercus lobata HOM05D003683 ORTHO05D004143 2.1e-08 62.4 71 53.5
CARHR140640 Cardamine hirsuta HOM05D003683 ORTHO05D004143 2.7e-08 62.0 70 52.9
Cc08_g13490 Coffea canephora HOM05D003683 ORTHO05D004143 2.7e-08 62.0 82 45.1
FAN10G4272 Fragaria x ananassa HOM05D003683 ORTHO05D004143 2.7e-08 62.0 63 57.1
RcHm_v2.0_Chr1g0350821 Rosa chinensis HOM05D003683 ORTHO05D004143 2.7e-08 62.0 72 52.8
Hund14673 Selenicereus undatus HOM05D003683 ORTHO05D004143 2.7e-08 62.0 83 50.6
Thecc.03G264300 Theobroma cacao HOM05D003683 ORTHO05D004143 2.7e-08 62.0 76 51.3
Hma1.2p1_1793F.1_g302590 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 3.6e-08 61.6 77 53.2
Potri.003G117200 Populus trichocarpa HOM05D003683 ORTHO05D004143 3.6e-08 61.6 84 47.6
FvH4_7g12070 Fragaria vesca HOM05D003683 ORTHO05D004143 4.7e-08 61.2 63 57.1
FAN06G0493 Fragaria x ananassa HOM05D003683 ORTHO05D004143 4.7e-08 61.2 63 57.1
FAN06G2934 Fragaria x ananassa HOM05D003683 ORTHO05D004143 4.7e-08 61.2 63 57.1
Sed0003331 Sechium edule HOM05D003683 ORTHO05D004143 4.7e-08 61.2 67 55.2
AL4G44620 Arabidopsis lyrata HOM05D003683 ORTHO05D004143 6.1e-08 60.8 70 52.9
Ciclev10023705m.g Citrus clementina HOM05D003683 ORTHO05D004143 6.1e-08 60.8 86 43.0
CsaV3_3G009560 Cucumis sativus L. HOM05D003683 ORTHO05D004143 6.1e-08 60.8 66 57.6
FAN10G1839 Fragaria x ananassa HOM05D003683 ORTHO05D004143 6.1e-08 60.8 81 49.4
A04p33850 Brassica napus HOM05D003683 ORTHO05D004143 7.9e-08 60.5 72 48.6
BraA04t18845Z Brassica rapa HOM05D003683 ORTHO05D004143 7.9e-08 60.5 72 48.6
CiPaw.01G260700 Carya illinoinensis HOM05D003683 ORTHO05D004143 7.9e-08 60.5 74 50.0
Prupe.2G147300 Prunus persica HOM05D003683 ORTHO05D004143 7.9e-08 60.5 81 51.9
Sp4g27480 Schrenkiella parvula HOM05D003683 ORTHO05D004143 7.9e-08 60.5 70 48.6
MELO3C006178.2 Cucumis melo HOM05D003683 ORTHO05D004143 1.0e-07 60.1 66 57.6
Migut.E01009 Erythranthe guttata HOM05D003683 ORTHO05D004143 1.0e-07 60.1 64 59.4
Sabra01G0087900 Salix brachista HOM05D003683 ORTHO05D004143 1.0e-07 60.1 84 46.4
MD07G1124000 Malus domestica HOM05D003683 ORTHO05D004143 1.4e-07 59.7 81 50.6
Carub.0004s2806 Capsella rubella HOM05D003683 ORTHO05D004143 1.8e-07 59.3 69 52.2
Cfa001703 Carpinus fangiana HOM05D003683 ORTHO05D004143 1.8e-07 59.3 86 48.8
CsaV3_5G003580 Cucumis sativus L. HOM05D003683 ORTHO05D004143 1.8e-07 59.3 76 44.7
Eucgr.E00491 Eucalyptus grandis HOM05D003683 ORTHO05D004143 1.8e-07 59.3 66 53.0
Gohir.D12G224900 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.8e-07 59.3 64 54.7
Nitab4.5_0000439g0100 Nicotiana tabacum HOM05D003683 ORTHO05D004143 1.8e-07 59.3 81 49.4
Sed0005281 Sechium edule HOM05D003683 ORTHO05D004143 1.8e-07 59.3 80 41.2
Aa31LG1G26950 Aethionema arabicum HOM05D003683 ORTHO05D004143 2.3e-07 58.9 84 44.0
BcaC02g12206 Brassica carinata HOM05D003683 ORTHO05D004143 2.3e-07 58.9 70 48.6
C04p06420 Brassica napus HOM05D003683 ORTHO05D004143 2.3e-07 58.9 70 48.6
BolC4t22265H Brassica oleracea HOM05D003683 ORTHO05D004143 2.3e-07 58.9 70 48.6
BcaC01g05122 Brassica carinata HOM05D003683 ORTHO05D004143 3.0e-07 58.5 68 50.0
BcaC01g05135 Brassica carinata HOM05D003683 ORTHO05D004143 3.0e-07 58.5 68 50.0
A03p25230 Brassica napus HOM05D003683 ORTHO05D004143 3.0e-07 58.5 68 50.0
C03p30100 Brassica napus HOM05D003683 ORTHO05D004143 3.0e-07 58.5 68 50.0
ClCG01G003480 Citrullus lanatus HOM05D003683 ORTHO05D004143 3.0e-07 58.5 73 43.8
Aqoxy7G00590 Aquilegia oxysepala HOM05D003683 ORTHO05D004143 3.9e-07 58.2 70 54.3
AT2G45450 Arabidopsis thaliana HOM05D003683 ORTHO05D004143 3.9e-07 58.2 70 50.0
BcaC02g10196 Brassica carinata HOM05D003683 ORTHO05D004143 3.9e-07 58.2 70 45.7
A04p01350 Brassica napus HOM05D003683 ORTHO05D004143 3.9e-07 58.2 70 45.7
CARHR171270 Cardamine hirsuta HOM05D003683 ORTHO05D004143 3.9e-07 58.2 68 50.0
COL.COLO4_12571 Corchorus olitorius HOM05D003683 ORTHO05D004143 3.9e-07 58.2 83 45.8
Nitab4.5_0006122g0030 Nicotiana tabacum HOM05D003683 ORTHO05D004143 3.9e-07 58.2 81 49.4
PGR042G1830 Punica granatum HOM05D003683 ORTHO05D004143 3.9e-07 58.2 66 53.0
Sed0004645 Sechium edule HOM05D003683 ORTHO05D004143 3.9e-07 58.2 80 42.5
BcaB02g08986 Brassica carinata HOM05D003683 ORTHO05D004143 5.1e-07 57.8 69 47.8
TAR375G1063 Trochodendron aralioides HOM05D003683 ORTHO05D004143 5.1e-07 57.8 70 51.4
Thhalv10006309m.g Eutrema salsugineum HOM05D003683 ORTHO05D004143 6.7e-07 57.4 73 45.2
Gohir.D12G105300 Gossypium hirsutum HOM05D003683 ORTHO05D004143 6.7e-07 57.4 83 45.8
Thecc.01G374500 Theobroma cacao HOM05D003683 ORTHO05D004143 6.7e-07 57.4 79 46.8
EL10Ac5g12652 Beta vulgaris HOM05D003683 ORTHO05D004143 8.8e-07 57.0 83 47.0
BcaB01g03267 Brassica carinata HOM05D003683 ORTHO05D004143 8.8e-07 57.0 68 48.5
BcaB02g08997 Brassica carinata HOM05D003683 ORTHO05D004143 8.8e-07 57.0 70 48.6
A05p05480 Brassica napus HOM05D003683 ORTHO05D004143 8.8e-07 57.0 70 47.1
BraA05t19518Z Brassica rapa HOM05D003683 ORTHO05D004143 8.8e-07 57.0 70 47.1
FAN01G1734 Fragaria x ananassa HOM05D003683 ORTHO05D004143 8.8e-07 57.0 63 54.0
Peaxi162Scf00021g00139 Petunia axillaris HOM05D003683 ORTHO05D004143 8.8e-07 57.0 47 63.8
BcaB02g07396 Brassica carinata HOM05D003683 ORTHO05D004143 1.1e-06 56.6 73 45.2
BcaB06g29422 Brassica carinata HOM05D003683 ORTHO05D004143 1.1e-06 56.6 72 48.6
Carub.0005s2764 Capsella rubella HOM05D003683 ORTHO05D004143 1.1e-06 56.6 73 43.8
Cpa.g.sc29.63 Carica papaya HOM05D003683 ORTHO05D004143 1.1e-06 56.6 46 63.0
AUR62010534 Chenopodium quinoa HOM05D003683 ORTHO05D004143 1.1e-06 56.6 73 49.3
Lj3g0025203 Lotus japonicus HOM05D003683 ORTHO05D004143 1.1e-06 56.6 92 40.2
Manes.01G264900 Manihot esculenta HOM05D003683 ORTHO05D004143 1.1e-06 56.6 49 61.2
BcaC02g07091 Brassica carinata HOM05D003683 ORTHO05D004143 1.5e-06 56.2 72 44.4
C04p71580 Brassica napus HOM05D003683 ORTHO05D004143 1.5e-06 56.2 72 44.4
BolC4t28663H Brassica oleracea HOM05D003683 ORTHO05D004143 1.5e-06 56.2 72 44.4
GSVIVG01027629001 Vitis vinifera HOM05D003683 ORTHO05D004143 1.5e-06 56.2 77 51.9
MSTRG.13795 Avicennia marina HOM05D003683 ORTHO05D004143 2.0e-06 55.8 81 45.7
AUR62017361 Chenopodium quinoa HOM05D003683 ORTHO05D004143 2.0e-06 55.8 85 44.7
Nn4g26435 Nelumbo nucifera HOM05D003683 ORTHO05D004143 3.3e-06 55.1 59 54.2
Sabra03G0081600 Salix brachista HOM05D003683 ORTHO05D004143 3.3e-06 55.1 84 42.9
TAR629G0669 Trochodendron aralioides HOM05D003683 ORTHO05D004143 3.3e-06 55.1 66 53.0
TAR629G3017 Trochodendron aralioides HOM05D003683 ORTHO05D004143 3.3e-06 55.1 66 53.0
Actinidia02072 Actinidia chinensis HOM05D003683 ORTHO05D004143 4.4e-06 54.7 64 53.1
MD02G1201500 Malus domestica HOM05D003683 ORTHO05D004143 5.7e-06 54.3 83 51.8
DCAR_008565 Daucus carota HOM05D003683 ORTHO05D004143 7.4e-06 53.9 45 64.4
Sp5g02360 Schrenkiella parvula HOM05D003683 ORTHO05D004143 7.4e-06 53.9 73 42.5
CiPaw.02G166400 Carya illinoinensis HOM05D003683 ORTHO05D004143 9.7e-06 53.5 78 48.7
Cc02_g36550 Coffea canephora HOM05D003683 ORTHO05D004143 9.7e-06 53.5 90 44.4


User provided reference genes

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