Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G3839 Erigeron canadensis HOM05D004355 ORTHO05D005228 6.0e-175 617.5 326 100.0
ECA233G2161 Erigeron canadensis HOM05D004355 ORTHO05D005228 2.4e-46 190.3 377 38.2
ECA233G2716 Erigeron canadensis HOM05D004355 ORTHO05D005228 2.0e-37 160.6 250 39.6
HanXRQChr13g0399881 Helianthus annuus HOM05D004355 ORTHO05D005228 4.5e-37 159.5 227 44.9
ECA248G2910 Erigeron canadensis HOM05D004355 ORTHO05D005228 5.5e-35 152.5 248 39.1
HanXRQChr11g0350251 Helianthus annuus HOM05D004355 ORTHO05D005228 6.1e-34 149.1 248 37.5
Rhsim05G0179400 Rhododendron simsii HOM05D004355 ORTHO05D005228 1.1e-30 138.3 237 35.0
DCAR_009301 Daucus carota HOM05D004355 ORTHO05D005228 1.8e-30 137.5 237 38.0
Lsat_1_v5_gn_6_31260 Lactuca sativa HOM05D004355 ORTHO05D005228 2.4e-30 137.1 248 37.5
ECA233G2931 Erigeron canadensis HOM05D004355 ORTHO05D005228 3.4e-29 133.3 219 39.7
Manes.09G063900 Manihot esculenta HOM05D004355 ORTHO05D005228 3.4e-29 133.3 226 35.4
Manes.08G008600 Manihot esculenta HOM05D004355 ORTHO05D005228 5.9e-29 132.5 236 34.3
TWI74G0762 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 7.7e-29 132.1 237 34.2
Nitab4.5_0002963g0100 Nicotiana tabacum HOM05D004355 ORTHO05D005228 1.0e-28 131.7 248 35.9
vmacro20020 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 1.0e-28 131.7 246 33.3
Atru.chr8.1850 Acer truncatum HOM05D004355 ORTHO05D005228 1.3e-28 131.3 236 35.6
CANSAT80G0576 Cannabis sativa HOM05D004355 ORTHO05D005228 1.3e-28 131.3 236 33.9
CsaV3_3G035850 Cucumis sativus L. HOM05D004355 ORTHO05D005228 1.3e-28 131.3 239 34.7
Dinv35767 Davidia involucrata HOM05D004355 ORTHO05D003235 2.9e-28 130.2 247 33.6
MELO3C009345.2 Cucumis melo HOM05D004355 ORTHO05D005228 3.8e-28 129.8 237 34.6
TWI77G0715 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 5.0e-28 129.4 237 34.2
Glyma.19G182500 Glycine max HOM05D004355 ORTHO05D005228 8.5e-28 128.6 237 34.6
Glyma.03G182000 Glycine max HOM05D004355 ORTHO05D005228 1.1e-27 128.3 226 35.8
Sabra16G0096600 Salix brachista HOM05D004355 ORTHO05D005228 1.4e-27 127.9 236 33.9
Actinidia19660 Actinidia chinensis HOM05D004355 ORTHO05D005228 1.9e-27 127.5 237 34.6
CSS0012498 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 1.9e-27 127.5 246 34.1
VMungo1383G3555 Vigna mungo HOM05D004355 ORTHO05D005228 1.9e-27 127.5 226 36.7
CSS0033330 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 2.5e-27 127.1 233 34.3
CSS0041806 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 2.5e-27 127.1 233 34.3
Lsat_1_v5_gn_6_70860 Lactuca sativa HOM05D004355 ORTHO05D005228 2.5e-27 127.1 243 37.0
Sed0019590 Sechium edule HOM05D004355 ORTHO05D005228 2.5e-27 127.1 239 33.5
Cc06_g04030 Coffea canephora HOM05D004355 ORTHO05D005228 4.2e-27 126.3 240 34.2
Phvul.001G178100 Phaseolus vulgaris HOM05D004355 ORTHO05D005228 4.2e-27 126.3 226 36.3
Sopen09g002770 Solanum pennellii HOM05D004355 ORTHO05D005228 4.2e-27 126.3 248 35.1
TAR633G2000 Trochodendron aralioides HOM05D004355 ORTHO05D005228 4.2e-27 126.3 236 34.7
PGSC0003DMG400035240 Solanum tuberosum HOM05D004355 ORTHO05D005228 7.2e-27 125.6 248 34.7
Dinv37299 Davidia involucrata HOM05D004355 ORTHO05D005228 9.4e-27 125.2 247 33.2
Rhsim04G0145100 Rhododendron simsii HOM05D004355 ORTHO05D005228 9.4e-27 125.2 237 33.8
Solyc09g007950.3 Solanum lycopersicum HOM05D004355 ORTHO05D005228 9.4e-27 125.2 248 35.1
Lsat_1_v5_gn_6_31200 Lactuca sativa HOM05D004355 ORTHO05D005228 1.6e-26 124.4 243 36.6
Lalb_Chr01g0018741 Lupinus albus HOM05D004355 ORTHO05D005228 2.1e-26 124.0 227 33.5
Cfa017577 Carpinus fangiana HOM05D004355 ORTHO05D005228 2.7e-26 123.6 246 33.7
Haze_20575 Corylus avellana HOM05D004355 ORTHO05D005228 2.7e-26 123.6 246 33.7
TAR369G0267 Trochodendron aralioides HOM05D004355 ORTHO05D005228 2.7e-26 123.6 236 32.6
Lj1g0007988 Lotus japonicus HOM05D004355 ORTHO05D005228 3.6e-26 123.2 225 34.2
SGA_v2.0_scaffold75G24855 Striga asiatica HOM05D004355 ORTHO05D005228 4.7e-26 122.9 239 31.8
MELO3C014220.2 Cucumis melo HOM05D004355 ORTHO05D005228 6.1e-26 122.5 235 34.0
CsaV3_6G039740 Cucumis sativus L. HOM05D004355 ORTHO05D005228 6.1e-26 122.5 235 34.0
Potri.016G091400 Populus trichocarpa HOM05D004355 ORTHO05D005228 6.1e-26 122.5 236 33.5
Peaxi162Scf00123g01123 Petunia axillaris HOM05D004355 ORTHO05D005228 8.0e-26 122.1 223 36.3
TAR636G0816 Trochodendron aralioides HOM05D004355 ORTHO05D005228 8.0e-26 122.1 236 35.6
vmacro08776 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 8.0e-26 122.1 237 32.5
Lsat_1_v5_gn_6_31300 Lactuca sativa HOM05D004355 ORTHO05D005228 1.0e-25 121.7 396 28.8
Hma1.2p1_1099F.1_g256870 Hydrangea macrophylla HOM05D004355 ORTHO05D005228 1.4e-25 121.3 238 32.8
Sc02g0001740 Simmondsia chinensis HOM05D004355 ORTHO05D005228 1.4e-25 121.3 236 35.2
Aqoxy1G01202 Aquilegia oxysepala HOM05D004355 ORTHO05D005228 1.8e-25 120.9 254 32.3
CiPaw.10G132700 Carya illinoinensis HOM05D004355 ORTHO05D005228 1.8e-25 120.9 248 32.3
Ciclev10011674m.g Citrus clementina HOM05D004355 ORTHO05D005228 1.8e-25 120.9 237 32.1
PGR004G0459 Punica granatum HOM05D004355 ORTHO05D005228 2.3e-25 120.6 294 30.6
ClCG04G009160 Citrullus lanatus HOM05D004355 ORTHO05D005228 3.0e-25 120.2 235 33.6
Cpa.g.sc92.114 Carica papaya HOM05D004355 ORTHO05D005228 8.8e-25 118.6 236 33.5
Gohir.D04G112100 Gossypium hirsutum HOM05D004355 ORTHO05D005228 8.8e-25 118.6 236 31.8
Nn2g13729 Nelumbo nucifera HOM05D004355 ORTHO05D005228 8.8e-25 118.6 236 34.7
QL07p044062 Quercus lobata HOM05D004355 ORTHO05D005228 8.8e-25 118.6 237 33.8
Duzib093G1016 Durio zibethinus HOM05D004355 ORTHO05D005228 1.5e-24 117.9 236 31.8
Migut.J00528 Erythranthe guttata HOM05D004355 ORTHO05D005228 1.5e-24 117.9 247 32.8
Eucgr.A01137 Eucalyptus grandis HOM05D004355 ORTHO05D005228 1.5e-24 117.9 237 33.3
Gohir.D09G144400 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.5e-24 117.9 236 31.8
Gorai.009G416200 Gossypium raimondii HOM05D004355 ORTHO05D005228 2.0e-24 117.5 236 31.8
Nitab4.5_0000101g0300 Nicotiana tabacum HOM05D004355 ORTHO05D005228 2.0e-24 117.5 237 35.0
AUR62039881 Chenopodium quinoa HOM05D004355 ORTHO05D005228 2.6e-24 117.1 238 32.8
Gohir.A04G073200 Gossypium hirsutum HOM05D004355 ORTHO05D005228 2.6e-24 117.1 236 31.8
Lj2P114T36 Lonicera japonica HOM05D004355 ORTHO05D005228 2.6e-24 117.1 239 33.5
Potri.006G126600 Populus trichocarpa HOM05D004355 ORTHO05D005228 2.6e-24 117.1 236 31.8
COL.COLO4_26990 Corchorus olitorius HOM05D004355 ORTHO05D005228 3.3e-24 116.7 236 31.8
Sabra06G0099700 Salix brachista HOM05D004355 ORTHO05D005228 3.3e-24 116.7 236 30.9
Ah.08g211740 Amaranthus hybridus HOM05D004355 ORTHO05D005228 4.4e-24 116.3 247 31.6
ClCG10G020240 Citrullus lanatus HOM05D004355 ORTHO05D005228 4.4e-24 116.3 228 34.2
Lalb_Chr25g0289061 Lupinus albus HOM05D004355 ORTHO05D005228 4.4e-24 116.3 227 34.4
Thecc.05G062900 Theobroma cacao HOM05D004355 ORTHO05D005228 4.4e-24 116.3 236 31.8
MSTRG.26701 Avicennia marina HOM05D004355 ORTHO05D005228 7.4e-24 115.5 244 31.6
Gorai.006G165700 Gossypium raimondii HOM05D004355 ORTHO05D005228 7.4e-24 115.5 236 31.4
unitig_899.g15220 Utricularia gibba HOM05D002910 ORTHO05D003235 7.4e-24 115.5 237 30.0
Duzib106G0643 Durio zibethinus HOM05D004355 ORTHO05D005228 1.3e-23 114.8 236 30.9
Gohir.A09G148600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.3e-23 114.8 236 31.4
GSVIVG01025706001 Vitis vinifera HOM05D004355 ORTHO05D005228 1.3e-23 114.8 251 32.7
AUR62040465 Chenopodium quinoa HOM05D004355 ORTHO05D005228 2.2e-23 114.0 238 31.9
PSO339G4715 Papaver somniferum HOM05D004355 ORTHO05D005228 2.2e-23 114.0 229 34.5
EL10Ac7g16576 Beta vulgaris HOM05D004355 ORTHO05D005228 2.8e-23 113.6 238 32.4
THA.LOC104823460 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 3.7e-23 113.2 236 31.8
AL4G33360 Arabidopsis lyrata HOM05D004355 ORTHO05D005228 4.8e-23 112.8 236 31.8
Duzib128G1889 Durio zibethinus HOM05D004355 ORTHO05D005228 4.8e-23 112.8 225 32.0
FAN05G2251 Fragaria x ananassa HOM05D004355 ORTHO05D005228 4.8e-23 112.8 230 33.5
SalBow5G3919 Salvia bowleyana HOM05D004355 ORTHO05D005228 4.8e-23 112.8 237 30.0
FvH4_6g16100 Fragaria vesca HOM05D004355 ORTHO05D005228 6.3e-23 112.5 230 33.5
FAN14G0897 Fragaria x ananassa HOM05D004355 ORTHO05D005228 6.3e-23 112.5 230 33.5
FAN14G5907 Fragaria x ananassa HOM05D004355 ORTHO05D005228 6.3e-23 112.5 230 33.5
Aa31LG5G22300 Aethionema arabicum HOM05D004355 ORTHO05D005228 8.2e-23 112.1 236 30.5
SalBow5G3882 Salvia bowleyana HOM05D004355 ORTHO05D005228 8.2e-23 112.1 237 30.0
TPR.G9373 Trifolium pratense HOM05D004355 ORTHO05D005228 1.1e-22 111.7 225 32.4
FAN02G3539 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.4e-22 111.3 230 33.0
RcHm_v2.0_Chr3g0469941 Rosa chinensis HOM05D004355 ORTHO05D005228 2.4e-22 110.5 230 33.0
Psat3g043400 Pisum sativum HOM05D004355 ORTHO05D005228 3.1e-22 110.2 225 32.9
Medtr7g101730 Medicago truncatula HOM05D004355 ORTHO05D005228 5.3e-22 109.4 225 32.4
Ca_08851_v3 Cicer arietinum L. HOM05D004355 ORTHO05D005228 2.0e-21 107.5 225 30.7
Prupe.6G235000 Prunus persica HOM05D004355 ORTHO05D005228 2.0e-21 107.5 230 33.0
Gohir.D01G128600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 4.5e-21 106.3 227 32.2
MD04G1095900 Malus domestica HOM05D004355 ORTHO05D005228 7.7e-21 105.5 230 32.6
BcaC02g11829 Brassica carinata HOM05D004355 ORTHO05D005228 1.0e-20 105.1 239 29.7
A05p08800 Brassica napus HOM05D004355 ORTHO05D005228 1.3e-20 104.8 239 29.7
BolC4t22685H Brassica oleracea HOM05D004355 ORTHO05D005228 1.3e-20 104.8 239 29.7
Migut.L01688 Erythranthe guttata HOM05D004355 ORTHO05D005228 1.3e-20 104.8 242 29.8
Gohir.A01G139600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.7e-20 104.4 226 31.4
THA.LOC104806491 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 1.7e-20 104.4 236 29.2
unitig_746.g26764 Utricularia gibba HOM05D004355 ORTHO05D005228 1.7e-20 104.4 237 28.7
C04p10920 Brassica napus HOM05D004355 ORTHO05D005228 5.0e-20 102.8 239 29.3
BraA05t19847Z Brassica rapa HOM05D004355 ORTHO05D005228 8.5e-20 102.1 239 29.3
CiPaw.09G174200 Carya illinoinensis HOM05D004355 ORTHO05D005228 9.4e-19 98.6 232 31.0
Lsat_1_v5_gn_1_53141 Lactuca sativa HOM05D004355 ORTHO05D005228 3.6e-18 96.7 238 31.5
Sp4g19340 Schrenkiella parvula HOM05D004355 ORTHO05D005228 1.0e-17 95.1 178 31.5
Sed0012541 Sechium edule HOM05D004355 ORTHO05D005228 1.0e-17 95.1 201 34.3
Carub.0004s1891 Capsella rubella HOM05D004355 ORTHO05D005228 1.4e-17 94.7 236 28.4
AT2G37035 Arabidopsis thaliana HOM05D004355 ORTHO05D005228 4.0e-17 93.2 236 28.4
PGR004G2422 Punica granatum HOM05D004355 ORTHO05D005228 1.5e-16 91.3 282 27.3
CARHR131530 Cardamine hirsuta HOM05D004355 ORTHO05D005228 1.3e-15 88.2 236 27.1
Zm00001eb221710 Zea mays HOM05D004355 ORTHO05D005228 5.3e-14 82.8 250 26.4
Zm00001eb045770 Zea mays HOM05D004355 ORTHO05D005228 9.1e-14 82.0 270 25.9
Actinidia31337 Actinidia chinensis HOM05D004355 ORTHO05D005228 1.2e-13 81.6 136 33.1
MD12G1115900 Malus domestica HOM05D004355 ORTHO05D005228 1.7e-12 77.8 180 33.9
Os10g0478400 Oryza sativa ssp. japonica HOM05D004355 ORTHO05D005228 1.7e-12 77.8 249 26.5
ATR0048G009 Amborella trichopoda HOM05D004355 ORTHO05D005228 5.0e-12 76.3 293 23.9
Gorai.002G162400 Gossypium raimondii HOM05D004355 ORTHO05D005228 1.1e-11 75.1 165 32.1
Oeu045215.1 Olea europaea HOM05D004355 ORTHO05D005228 1.5e-08 64.7 223 25.6
FAN09G2758 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.7e-07 61.2 103 35.9
FAN09G2012 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.1e-06 58.5 125 32.0


User provided reference genes

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