Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G3646 Erigeron canadensis HOM05D000410 ORTHO05D003193 1.3e-114 416.4 215 100.0
Lsat_1_v5_gn_8_29780 Lactuca sativa HOM05D000410 ORTHO05D003193 1.3e-61 240.4 214 68.2
HanXRQChr12g0366811 Helianthus annuus HOM05D000410 ORTHO05D003193 3.5e-54 215.7 213 63.4
HanXRQChr13g0387141 Helianthus annuus HOM05D000410 ORTHO05D003193 1.2e-46 190.7 217 56.7
Dinv31871 Davidia involucrata HOM05D000410 ORTHO05D003193 4.3e-20 102.4 225 36.0
Nitab4.5_0000079g0280 Nicotiana tabacum HOM05D000410 ORTHO05D003193 6.2e-19 98.6 217 34.1
MSTRG.25266 Avicennia marina HOM05D000410 ORTHO05D003193 1.4e-18 97.4 123 45.5
Nitab4.5_0000283g0380 Nicotiana tabacum HOM05D000410 ORTHO05D003193 2.4e-18 96.7 221 33.0
PGSC0003DMG400006187 Solanum tuberosum HOM05D000410 ORTHO05D003193 6.9e-18 95.1 217 32.7
Ciclev10003489m.g Citrus clementina HOM05D000410 ORTHO05D003193 1.2e-17 94.4 233 36.5
Peaxi162Scf00042g02412 Petunia axillaris HOM05D000410 ORTHO05D003193 1.2e-17 94.4 230 31.7
Rhsim05G0056800 Rhododendron simsii HOM05D000410 ORTHO05D003193 3.4e-17 92.8 218 33.5
Cc10_g01400 Coffea canephora HOM05D000410 ORTHO05D003193 7.6e-17 91.7 149 38.3
Hma1.2p1_0163F.1_g072480 Hydrangea macrophylla HOM05D000410 ORTHO05D003193 7.6e-17 91.7 205 34.1
Actinidia23579 Actinidia chinensis HOM05D000410 ORTHO05D003193 1.7e-16 90.5 204 31.4
Nitab4.5_0003914g0080 Nicotiana tabacum HOM05D000410 ORTHO05D003193 1.7e-16 90.5 221 31.7
Migut.N01320 Erythranthe guttata HOM05D000410 ORTHO05D003193 6.4e-16 88.6 212 32.5
SalBow3G0122 Salvia bowleyana HOM05D000410 ORTHO05D003193 1.1e-15 87.8 213 32.4
SalBow7G4039 Salvia bowleyana HOM05D000410 ORTHO05D003193 1.4e-15 87.4 125 43.2
vmacro17346 Vaccinium macrocarpon HOM05D000410 ORTHO05D003193 1.4e-15 87.4 209 34.4
Actinidia17003 Actinidia chinensis HOM05D000410 ORTHO05D003193 1.9e-15 87.0 209 34.0
Gohir.A01G168800 Gossypium hirsutum HOM05D000410 ORTHO05D003193 1.9e-15 87.0 219 33.3
PGSC0003DMG400026724 Solanum tuberosum HOM05D000410 ORTHO05D003193 1.9e-15 87.0 219 31.1
Migut.C00864 Erythranthe guttata HOM05D000410 ORTHO05D003193 3.2e-15 86.3 116 43.1
TAR625G1321 Trochodendron aralioides HOM05D000410 ORTHO05D003193 3.2e-15 86.3 214 35.0
Gohir.D01G159700 Gossypium hirsutum HOM05D000410 ORTHO05D003193 4.2e-15 85.9 221 33.5
Gorai.002G198200 Gossypium raimondii HOM05D000410 ORTHO05D003193 4.2e-15 85.9 221 33.5
Solyc01g111610.3 Solanum lycopersicum HOM05D000410 ORTHO05D003193 4.2e-15 85.9 208 33.7
Nitab4.5_0005236g0030 Nicotiana tabacum HOM05D000410 ORTHO05D003193 5.4e-15 85.5 211 30.8
Rhsim06G0018500 Rhododendron simsii HOM05D000410 ORTHO05D003193 5.4e-15 85.5 116 43.1
CSS0000474 Camellia sinensis var. sinensis HOM05D000410 ORTHO05D003193 7.1e-15 85.1 215 33.0
Solyc10g055560.2 Solanum lycopersicum HOM05D000410 ORTHO05D003193 7.1e-15 85.1 220 30.9
Sopen01g053650 Solanum pennellii HOM05D000410 ORTHO05D003193 7.1e-15 85.1 215 33.5
Oeu026640.1 Olea europaea HOM05D000410 ORTHO05D003193 9.3e-15 84.7 210 34.3
MSTRG.16907 Avicennia marina HOM05D000410 ORTHO05D003193 2.1e-14 83.6 119 39.5
MSTRG.27637 Avicennia marina HOM05D000410 ORTHO05D003193 2.1e-14 83.6 212 32.5
Atru.chr13.251 Acer truncatum HOM05D000410 ORTHO05D003193 2.7e-14 83.2 120 42.5
Actinidia15441 Actinidia chinensis HOM05D000410 ORTHO05D003193 3.5e-14 82.8 116 41.4
Nitab4.5_0000369g0100 Nicotiana tabacum HOM05D000410 ORTHO05D003193 3.5e-14 82.8 131 37.4
QL11p050700 Quercus lobata HOM05D000410 ORTHO05D003193 3.5e-14 82.8 125 38.4
Peaxi162Scf00362g00634 Petunia axillaris HOM05D000410 ORTHO05D003193 4.6e-14 82.4 215 30.7
Oeu006690.1 Olea europaea HOM05D000410 ORTHO05D003193 6.0e-14 82.0 220 30.5
Cfa005246 Carpinus fangiana HOM05D000410 ORTHO05D003193 1.0e-13 81.3 237 30.0
Sabra04G0117300 Salix brachista HOM05D000410 ORTHO05D003193 1.0e-13 81.3 173 34.7
Nitab4.5_0002763g0020 Nicotiana tabacum HOM05D000410 ORTHO05D003193 1.3e-13 80.9 206 32.0
Sopen10g025300 Solanum pennellii HOM05D000410 ORTHO05D003193 1.3e-13 80.9 124 37.1
CiPaw.06G121800 Carya illinoinensis HOM05D000410 ORTHO05D003193 1.8e-13 80.5 233 30.0
MSTRG.5452 Avicennia marina HOM05D000410 ORTHO05D003193 2.3e-13 80.1 219 30.1
CSS0036741 Camellia sinensis var. sinensis HOM05D000410 ORTHO05D003193 2.3e-13 80.1 216 31.0
QL02p012235 Quercus lobata HOM05D000410 ORTHO05D003193 3.0e-13 79.7 215 32.6
TWI12G0045 Tripterygium wilfordii HOM05D000410 ORTHO05D003193 3.9e-13 79.3 214 32.2
DCAR_003171 Daucus carota HOM05D000410 ORTHO05D003193 5.1e-13 79.0 234 31.2
MD10G1124700 Malus domestica HOM05D000410 ORTHO05D003193 5.1e-13 79.0 241 29.9
FvH4_2g01150 Fragaria vesca HOM05D000410 ORTHO05D003193 8.7e-13 78.2 207 32.4
MD08G1010000 Malus domestica HOM05D000410 ORTHO05D003193 8.7e-13 78.2 122 37.7
Duzib052G0401 Durio zibethinus HOM05D000410 ORTHO05D003193 1.5e-12 77.4 224 30.8
Sabra09G0105100 Salix brachista HOM05D000410 ORTHO05D003193 1.5e-12 77.4 128 38.3
TWI31G0485 Tripterygium wilfordii HOM05D000410 ORTHO05D003193 1.5e-12 77.4 134 33.6
GSVIVG01024021001 Vitis vinifera HOM05D000410 ORTHO05D003193 1.5e-12 77.4 129 38.0
Duzib132G0350 Durio zibethinus HOM05D000410 ORTHO05D003193 2.5e-12 76.6 226 31.0
Migut.B00078 Erythranthe guttata HOM05D000410 ORTHO05D003193 2.5e-12 76.6 120 37.5
Potri.009G135400 Populus trichocarpa HOM05D000410 ORTHO05D003193 2.5e-12 76.6 151 35.8
SGA_v2.0_scaffold32G13284 Striga asiatica HOM05D000410 ORTHO05D003193 3.3e-12 76.3 211 30.8
Duzib248G1595 Durio zibethinus HOM05D000410 ORTHO05D003193 4.3e-12 75.9 220 32.7
Potri.004G175500 Populus trichocarpa HOM05D000410 ORTHO05D003193 5.6e-12 75.5 154 34.4
Dinv41938 Davidia involucrata HOM05D003994 ORTHO05D004957 7.4e-12 75.1 208 28.4
Thecc.02G059900 Theobroma cacao HOM05D000410 ORTHO05D003193 7.4e-12 75.1 122 36.9
PGR042G1439 Punica granatum HOM05D000410 ORTHO05D003193 9.6e-12 74.7 141 34.8
Cpa.g.sc26.296 Carica papaya HOM05D000410 ORTHO05D003193 1.3e-11 74.3 216 32.9
Haze_22669 Corylus avellana HOM05D000410 ORTHO05D003193 1.6e-11 73.9 130 36.9
AUR62043668 Chenopodium quinoa HOM05D000410 ORTHO05D003193 2.1e-11 73.6 107 37.4
Thhalv10027575m.g Eutrema salsugineum HOM05D000410 ORTHO05D003193 2.1e-11 73.6 213 30.0
Hma1.2p1_0023F.1_g015670 Hydrangea macrophylla HOM05D000410 ORTHO05D003193 2.1e-11 73.6 88 47.7
AL7G16150 Arabidopsis lyrata HOM05D000410 ORTHO05D003193 2.8e-11 73.2 216 28.2
BcaNung02370 Brassica carinata HOM05D000410 ORTHO05D003193 2.8e-11 73.2 147 32.7
BolC7t46517H Brassica oleracea HOM05D000410 ORTHO05D003193 2.8e-11 73.2 147 32.7
Lj5P178T68 Lonicera japonica HOM05D000410 ORTHO05D003193 2.8e-11 73.2 117 35.0
MD05G1122000 Malus domestica HOM05D000410 ORTHO05D003193 2.8e-11 73.2 239 28.0
Nn5g30786 Nelumbo nucifera HOM05D000410 ORTHO05D003193 2.8e-11 73.2 181 30.9
TWI75G0032 Tripterygium wilfordii HOM05D000410 ORTHO05D003193 2.8e-11 73.2 204 30.4
MSTRG.19988 Avicennia marina HOM05D000410 ORTHO05D003193 3.6e-11 72.8 134 35.8
C07p60910 Brassica napus HOM05D000410 ORTHO05D003193 3.6e-11 72.8 147 32.0
AUR62013030 Chenopodium quinoa HOM05D000410 ORTHO05D003193 3.6e-11 72.8 107 38.3
MD15G1009900 Malus domestica HOM05D000410 ORTHO05D003193 3.6e-11 72.8 122 34.4
Potri.002G019000 Populus trichocarpa HOM05D000410 ORTHO05D003193 3.6e-11 72.8 223 30.0
RcHm_v2.0_Chr6g0251771 Rosa chinensis HOM05D000410 ORTHO05D003193 3.6e-11 72.8 210 31.0
A08p16390 Brassica napus HOM05D000410 ORTHO05D003193 4.8e-11 72.4 220 30.0
FAN15G1862 Fragaria x ananassa HOM05D000410 ORTHO05D003193 4.8e-11 72.4 207 30.9
FAN24G3571 Fragaria x ananassa HOM05D000410 ORTHO05D003193 4.8e-11 72.4 207 31.9
Sc14g0002270 Simmondsia chinensis HOM05D000410 ORTHO05D003193 4.8e-11 72.4 122 35.2
AT4G35070 Arabidopsis thaliana HOM05D000410 ORTHO05D003193 6.2e-11 72.0 226 28.3
Haze_02137 Corylus avellana HOM05D000410 ORTHO05D003193 6.2e-11 72.0 123 35.0
TWI36G0542 Tripterygium wilfordii HOM05D000410 ORTHO05D003193 6.2e-11 72.0 217 30.0
TWI79G1704 Tripterygium wilfordii HOM05D000410 ORTHO05D003193 6.2e-11 72.0 130 32.3
Manes.04G076100 Manihot esculenta HOM05D000410 ORTHO05D003193 8.1e-11 71.6 124 34.7
Sabra02G0015300 Salix brachista HOM05D000410 ORTHO05D003193 8.1e-11 71.6 124 37.9
COL.COLO4_17340 Corchorus olitorius HOM05D000410 ORTHO05D003193 1.1e-10 71.2 214 30.4
PSO541G1763 Papaver somniferum HOM05D000410 ORTHO05D003193 1.1e-10 71.2 130 35.4
Lj1g0017404 Lotus japonicus HOM05D000410 ORTHO05D003193 1.4e-10 70.9 180 30.6
Hund00021 Selenicereus undatus HOM05D000410 ORTHO05D003193 1.4e-10 70.9 202 29.7
Cfa013984 Carpinus fangiana HOM05D000410 ORTHO05D003193 1.8e-10 70.5 123 38.2
THA.LOC104819655 Tarenaya hassleriana HOM05D000410 ORTHO05D003193 1.8e-10 70.5 218 29.4
BraA08t33607Z Brassica rapa HOM05D000410 ORTHO05D003193 2.4e-10 70.1 220 29.5
CANSAT25G2705 Cannabis sativa HOM05D000410 ORTHO05D003193 2.4e-10 70.1 237 26.6
Oeu055668.1 Olea europaea HOM05D000410 ORTHO05D003193 2.4e-10 70.1 207 29.5
Oeu055669.1 Olea europaea HOM05D000410 ORTHO05D003193 2.4e-10 70.1 207 29.5
BcaB03g11793 Brassica carinata HOM05D000410 ORTHO05D003193 3.1e-10 69.7 215 28.8
BcaB03g11794 Brassica carinata HOM05D000410 ORTHO05D003193 3.1e-10 69.7 215 28.8
HanXRQChr17g0570671 Helianthus annuus HOM05D000410 ORTHO05D003193 3.1e-10 69.7 218 28.4
PSO675G4644 Papaver somniferum HOM05D000410 ORTHO05D003193 3.1e-10 69.7 161 31.7
CARHR243350 Cardamine hirsuta HOM05D000410 ORTHO05D003193 4.0e-10 69.3 221 30.3
Eucgr.I01419 Eucalyptus grandis HOM05D000410 ORTHO05D003193 4.0e-10 69.3 132 34.8
Lsat_1_v5_gn_8_124401 Lactuca sativa HOM05D000410 ORTHO05D003193 4.0e-10 69.3 214 28.0
FAN27G1294 Fragaria x ananassa HOM05D000410 ORTHO05D003193 5.3e-10 68.9 213 30.0
EL10Ac9g21378 Beta vulgaris HOM05D000410 ORTHO05D003193 9.0e-10 68.2 105 35.2
Prupe.8G165800 Prunus persica HOM05D000410 ORTHO05D003193 9.0e-10 68.2 133 30.8
Sed0022078 Sechium edule HOM05D000410 ORTHO05D003193 9.0e-10 68.2 142 33.8
A03p63260 Brassica napus HOM05D000410 ORTHO05D003193 1.5e-09 67.4 146 31.5
SGA_v2.0_scaffold58G20365 Striga asiatica HOM05D000410 ORTHO05D003193 1.5e-09 67.4 185 27.6
BraA03t15404Z Brassica rapa HOM05D000410 ORTHO05D003193 2.0e-09 67.0 146 31.5
MELO3C013352.2 Cucumis melo HOM05D000410 ORTHO05D003193 2.0e-09 67.0 120 34.2
Sed0012285 Sechium edule HOM05D000410 ORTHO05D003193 2.0e-09 67.0 178 30.9
CiPaw.05G082300 Carya illinoinensis HOM05D000410 ORTHO05D003193 2.6e-09 66.6 226 29.2
Potri.005G242600 Populus trichocarpa HOM05D000410 ORTHO05D003193 2.6e-09 66.6 207 32.4
VMungo1309G3017 Vigna mungo HOM05D000410 ORTHO05D003193 2.6e-09 66.6 224 31.2
Sp7g32840 Schrenkiella parvula HOM05D000410 ORTHO05D003193 3.4e-09 66.2 199 26.6
CiPaw.07G146500 Carya illinoinensis HOM05D000410 ORTHO05D003193 4.5e-09 65.9 130 31.5
CsaV3_7G001040 Cucumis sativus L. HOM05D000410 ORTHO05D003193 4.5e-09 65.9 128 32.8
Gohir.A01G002466 Gossypium hirsutum HOM05D000410 ORTHO05D003193 4.5e-09 65.9 119 34.5
Sc18g0006430 Simmondsia chinensis HOM05D000410 ORTHO05D003193 4.5e-09 65.9 218 27.5
unitig_749.g13902 Utricularia gibba HOM05D000410 ORTHO05D003193 5.8e-09 65.5 101 36.6
Cc09_g09780 Coffea canephora HOM05D000410 ORTHO05D003193 7.6e-09 65.1 147 29.3
Medtr4g036485 Medicago truncatula HOM05D000410 ORTHO05D003193 7.6e-09 65.1 136 33.1
Manes.11G096100 Manihot esculenta HOM05D000410 ORTHO05D003193 9.9e-09 64.7 215 27.9
unitig_82.g27110 Utricularia gibba HOM05D000410 ORTHO05D003193 9.9e-09 64.7 104 41.3
Cpa.g.sc37.131 Carica papaya HOM05D000410 ORTHO05D003193 1.3e-08 64.3 158 27.8
Nn6g31988 Nelumbo nucifera HOM05D000410 ORTHO05D003193 1.3e-08 64.3 132 36.4
C03p85210 Brassica napus HOM05D000410 ORTHO05D003193 2.2e-08 63.5 212 28.3
Aqoxy6G02157 Aquilegia oxysepala HOM05D000410 ORTHO05D003193 2.9e-08 63.2 155 31.0
AUR62013930 Chenopodium quinoa HOM05D000410 ORTHO05D003193 2.9e-08 63.2 98 34.7
ClCG02G004080 Citrullus lanatus HOM05D000410 ORTHO05D003193 2.9e-08 63.2 137 32.8
Dinv17656 Davidia involucrata HOM05D001610 ORTHO05D001585 3.8e-08 62.8 117 35.9
Manes.05G145000 Manihot esculenta HOM05D000410 ORTHO05D003193 3.8e-08 62.8 221 31.7
Manes.18G011107 Manihot esculenta HOM05D000410 ORTHO05D003193 3.8e-08 62.8 214 29.9
Sc08g0002920 Simmondsia chinensis HOM05D000410 ORTHO05D003193 3.8e-08 62.8 200 26.0
ECA233G2636 Erigeron canadensis HOM05D000410 ORTHO05D003193 4.9e-08 62.4 224 25.9
Gohir.D01G002150 Gossypium hirsutum HOM05D000410 ORTHO05D003193 4.9e-08 62.4 119 32.8
Gohir.A05G256300 Gossypium hirsutum HOM05D000410 ORTHO05D003193 6.4e-08 62.0 207 29.5
Glyma.04G003600 Glycine max HOM05D000410 ORTHO05D003193 8.4e-08 61.6 122 34.4
Hund01674 Selenicereus undatus HOM05D000410 ORTHO05D003193 1.1e-07 61.2 209 27.3
arahy.Tifrunner.gnm1.ann1.E4AETI Arachis hypogaea HOM05D000410 ORTHO05D003193 1.4e-07 60.8 221 26.7
Actinidia20512 Actinidia chinensis HOM05D000410 ORTHO05D003193 1.9e-07 60.5 151 32.5
BcaC01g00851 Brassica carinata HOM05D000410 ORTHO05D003193 1.9e-07 60.5 212 27.8
BolC3t20810H Brassica oleracea HOM05D000410 ORTHO05D003193 1.9e-07 60.5 212 27.8
AUR62040568 Chenopodium quinoa HOM05D000410 ORTHO05D003193 1.9e-07 60.5 125 30.4
Gorai.002G002800 Gossypium raimondii HOM05D000410 ORTHO05D003193 1.9e-07 60.5 117 32.5
Sc14g0002260 Simmondsia chinensis HOM05D000410 ORTHO05D003193 1.9e-07 60.5 222 25.7
Glyma.06G003500 Glycine max HOM05D000410 ORTHO05D003193 2.4e-07 60.1 213 29.6
Lalb_Chr19g0139061 Lupinus albus HOM05D000410 ORTHO05D003193 3.2e-07 59.7 111 31.5
TAR628G0975 Trochodendron aralioides HOM05D000410 ORTHO05D003193 3.2e-07 59.7 113 32.7
EL10Ac1g02156 Beta vulgaris HOM05D000410 ORTHO05D003193 4.2e-07 59.3 135 27.4
arahy.Tifrunner.gnm1.ann1.2PCK9I Arachis hypogaea HOM05D000410 ORTHO05D003193 9.3e-07 58.2 223 25.1
Ca_19073_v3 Cicer arietinum L. HOM05D000410 ORTHO05D003193 9.3e-07 58.2 127 28.3
Nn4g22058 Nelumbo nucifera HOM05D000410 ORTHO05D003410 1.2e-06 57.8 170 28.8
Carub.0007s2370 Capsella rubella HOM05D000410 ORTHO05D002963 1.6e-06 57.4 122 32.0
Sabra05G0187800 Salix brachista HOM05D000410 ORTHO05D003193 2.1e-06 57.0 216 31.0
Sc02g0008700 Simmondsia chinensis HOM05D000410 ORTHO05D003193 2.1e-06 57.0 226 30.1
Gohir.A03G205100 Gossypium hirsutum HOM05D000410 ORTHO05D003193 2.7e-06 56.6 210 27.6
AL7G36910 Arabidopsis lyrata HOM05D000410 ORTHO05D002963 3.5e-06 56.2 134 28.4
Medtr3g117970 Medicago truncatula HOM05D000410 ORTHO05D003193 3.5e-06 56.2 151 31.8
PGR142G2306 Punica granatum HOM05D000410 ORTHO05D003193 3.5e-06 56.2 104 28.8
Ciclev10028906m.g Citrus clementina HOM05D000410 ORTHO05D003193 6.0e-06 55.5 137 29.9


User provided reference genes

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