Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G3571 Erigeron canadensis HOM05D006755 ORTHO05D008472 5.3e-154 548.1 383 100.0
HanXRQChr07g0186241 Helianthus annuus HOM05D006755 ORTHO05D008472 9.6e-63 245.0 419 64.4
Lsat_1_v5_gn_6_28960 Lactuca sativa HOM05D006755 ORTHO05D008472 2.6e-52 210.3 409 56.0
Cc08_g09000 Coffea canephora HOM05D006755 ORTHO05D008472 2.9e-35 153.7 295 53.2
Medtr8g098445 Medicago truncatula HOM05D006755 ORTHO05D008472 1.1e-34 151.8 234 67.1
Peaxi162Scf00876g00046 Petunia axillaris HOM05D006755 ORTHO05D008472 3.2e-34 150.2 281 60.5
Oeu033356.1 Olea europaea HOM05D006755 ORTHO05D008472 5.5e-34 149.4 286 58.7
Thecc.02G149300 Theobroma cacao HOM05D006755 ORTHO05D008472 5.5e-34 149.4 322 54.7
Migut.E01827 Erythranthe guttata HOM05D006755 ORTHO05D008472 9.3e-34 148.7 281 59.8
Glyma.11G065700 Glycine max HOM05D006755 ORTHO05D008472 1.6e-33 147.9 293 56.7
TPR.G18806 Trifolium pratense HOM05D006755 ORTHO05D008472 2.7e-33 147.1 271 61.3
Aa31LG6G16930 Aethionema arabicum HOM05D006755 ORTHO05D008472 4.6e-33 146.4 298 56.4
Eucgr.I01549 Eucalyptus grandis HOM05D006755 ORTHO05D008472 4.6e-33 146.4 232 68.1
CSS0044736 Camellia sinensis var. sinensis HOM05D006755 ORTHO05D008472 7.9e-33 145.6 231 66.7
CANSAT25G1067 Cannabis sativa HOM05D006755 ORTHO05D008472 7.9e-33 145.6 268 61.9
CANSAT25G1651 Cannabis sativa HOM05D006755 ORTHO05D008472 7.9e-33 145.6 268 61.9
Phvul.002G027800 Phaseolus vulgaris HOM05D006755 ORTHO05D008472 7.9e-33 145.6 286 58.4
Duzib052G1107 Durio zibethinus HOM05D006755 ORTHO05D008472 1.0e-32 145.2 274 58.8
Psat2g160920 Pisum sativum HOM05D006755 ORTHO05D008472 1.0e-32 145.2 325 54.5
Solyc12g096140.3 Solanum lycopersicum HOM05D006755 ORTHO05D008472 1.3e-32 144.8 281 58.7
arahy.Tifrunner.gnm1.ann1.0IBU2N Arachis hypogaea HOM05D006755 ORTHO05D008472 2.3e-32 144.1 268 59.7
Glyma.01G176900 Glycine max HOM05D006755 ORTHO05D008472 2.3e-32 144.1 328 53.0
PGSC0003DMG400029290 Solanum tuberosum HOM05D006755 ORTHO05D008472 2.3e-32 144.1 261 60.9
VMungo1215G0649 Vigna mungo HOM05D006755 ORTHO05D008472 2.3e-32 144.1 287 57.8
Lj2g0006557 Lotus japonicus HOM05D006755 ORTHO05D008472 3.0e-32 143.7 291 59.8
Actinidia26119 Actinidia chinensis HOM05D006755 ORTHO05D008472 3.9e-32 143.3 185 76.2
Nitab4.5_0000943g0100 Nicotiana tabacum HOM05D006755 ORTHO05D008472 3.9e-32 143.3 281 59.1
Zm00001eb342190 Zea mays HOM05D006755 ORTHO05D008472 5.1e-32 142.9 198 71.2
Gohir.D13G058100 Gossypium hirsutum HOM05D006755 ORTHO05D008472 6.7e-32 142.5 278 59.0
Gorai.013G065500 Gossypium raimondii HOM05D006755 ORTHO05D008472 6.7e-32 142.5 278 59.0
SGA_v2.0_scaffold21G09644 Striga asiatica HOM05D006755 ORTHO05D008472 6.7e-32 142.5 262 61.8
Hma1.2p1_0052F.1_g030470 Hydrangea macrophylla HOM05D006755 ORTHO05D008472 8.7e-32 142.1 319 56.7
arahy.Tifrunner.gnm1.ann1.HWJ5MG Arachis hypogaea HOM05D006755 ORTHO05D008472 1.1e-31 141.7 258 60.5
Gohir.A13G063800 Gossypium hirsutum HOM05D006755 ORTHO05D008472 4.3e-31 139.8 279 49.5
COL.COLO4_04807 Corchorus olitorius HOM05D006755 ORTHO05D008472 5.7e-31 139.4 291 56.7
BcaC06g31423 Brassica carinata HOM05D006755 ORTHO05D008472 9.6e-31 138.7 257 60.7
Carub.0007s0004 Capsella rubella HOM05D006755 ORTHO05D008472 9.6e-31 138.7 231 63.6
Os01g0546500 Oryza sativa ssp. japonica HOM05D006755 ORTHO05D008472 9.6e-31 138.7 207 69.1
EL10Ac9g21570 Beta vulgaris HOM05D006755 ORTHO05D008472 1.3e-30 138.3 238 64.3
Nitab4.5_0009982g0010 Nicotiana tabacum HOM05D006755 ORTHO05D008472 1.3e-30 138.3 306 55.2
Sopen12g032020 Solanum pennellii HOM05D006755 ORTHO05D008472 1.3e-30 138.3 321 53.9
QL11p057006 Quercus lobata HOM05D006755 ORTHO05D008472 1.6e-30 137.9 236 63.6
MSTRG.1737 Avicennia marina HOM05D006755 ORTHO05D008472 2.1e-30 137.5 289 58.5
Duzib132G0679 Durio zibethinus HOM05D006755 ORTHO05D008472 2.1e-30 137.5 315 54.0
Medtr5g019860 Medicago truncatula HOM05D006755 ORTHO05D008472 2.8e-30 137.1 234 63.7
HPP92_007220 Vanilla planifolia HOM05D006755 ORTHO05D008472 2.8e-30 137.1 196 73.5
CAN.G947.37 Capsicum annuum HOM05D006755 ORTHO05D008472 3.7e-30 136.7 312 55.1
Lj9P409T68 Lonicera japonica HOM05D006755 ORTHO05D008472 4.8e-30 136.3 264 61.7
BolC7t43606H Brassica oleracea HOM05D006755 ORTHO05D008472 6.3e-30 136.0 231 64.5
SHI05798 Sapria himalayana HOM05D006755 ORTHO05D008472 6.3e-30 136.0 192 74.0
Sp7g37600 Schrenkiella parvula HOM05D006755 ORTHO05D008472 8.2e-30 135.6 280 57.9
BcaC06g34295 Brassica carinata HOM05D006755 ORTHO05D008472 1.1e-29 135.2 231 64.1
PSO541G3341 Papaver somniferum HOM05D006755 ORTHO05D008472 1.1e-29 135.2 280 43.9
Dinv41852 Davidia involucrata HOM05D006755 ORTHO05D008472 1.4e-29 134.8 259 61.4
Nitab4.5_0002859g0100 Nicotiana tabacum HOM05D006755 ORTHO05D008472 1.4e-29 134.8 321 52.3
Nitab4.5_0001968g0030 Nicotiana tabacum HOM05D006755 ORTHO05D008472 2.4e-29 134.0 226 66.4
Rhsim12G0052500 Rhododendron simsii HOM05D006755 ORTHO05D008472 2.4e-29 134.0 327 53.2
Ca_00389_v3 Cicer arietinum L. HOM05D006755 ORTHO05D008472 4.1e-29 133.3 317 54.6
CiPaw.06G113100 Carya illinoinensis HOM05D006755 ORTHO05D008472 6.9e-29 132.5 244 64.8
HPP92_025325 Vanilla planifolia HOM05D006755 ORTHO05D008472 6.9e-29 132.5 252 61.9
DCAR_025005 Daucus carota HOM05D006755 ORTHO05D008472 9.0e-29 132.1 288 57.3
PGR142G2394 Punica granatum HOM05D006755 ORTHO05D008472 9.0e-29 132.1 305 53.4
Lj2g0026453 Lotus japonicus HOM05D006755 ORTHO05D008472 1.2e-28 131.7 311 54.0
CARHR293910 Cardamine hirsuta HOM05D006755 ORTHO05D008472 1.5e-28 131.3 245 62.0
CDE02G4616 Ceratophyllum demersum HOM05D006755 ORTHO05D008472 1.5e-28 131.3 310 55.8
C07p30650 Brassica napus HOM05D006755 ORTHO05D008472 2.0e-28 131.0 231 63.2
AL7G10050 Arabidopsis lyrata HOM05D006755 ORTHO05D008472 2.6e-28 130.6 271 58.3
Thhalv10005467m.g Eutrema salsugineum HOM05D006755 ORTHO05D008472 2.6e-28 130.6 246 62.6
A06p45360 Brassica napus HOM05D006755 ORTHO05D008472 3.4e-28 130.2 231 63.6
BraA06t27405Z Brassica rapa HOM05D006755 ORTHO05D008472 4.5e-28 129.8 252 60.3
THA.LOC104823440 Tarenaya hassleriana HOM05D006755 ORTHO05D008472 5.9e-28 129.4 183 74.3
TAR376G0479 Trochodendron aralioides HOM05D006755 ORTHO05D008472 5.9e-28 129.4 313 56.5
PSO675G0405 Papaver somniferum HOM05D006755 ORTHO05D008472 1.3e-27 128.3 341 39.6
Lalb_Chr09g0322551 Lupinus albus HOM05D006755 ORTHO05D008472 5.0e-27 126.3 286 53.1
vmacro08131 Vaccinium macrocarpon HOM05D006755 ORTHO05D008472 5.0e-27 126.3 180 75.0
Prupe.8G183200 Prunus persica HOM05D006755 ORTHO05D008472 6.5e-27 125.9 271 57.2
Aqoxy4G02640 Aquilegia oxysepala HOM05D006755 ORTHO05D008472 8.5e-27 125.6 287 54.7
SalBow1G4250 Salvia bowleyana HOM05D006755 ORTHO05D008472 1.9e-26 124.4 268 47.0
Cfa005407 Carpinus fangiana HOM05D006755 ORTHO05D008472 5.5e-26 122.9 249 59.8
TWI75G0077 Tripterygium wilfordii HOM05D006755 ORTHO05D008472 5.5e-26 122.9 179 76.5
Ah.01g010520 Amaranthus hybridus HOM05D006755 ORTHO05D008472 1.2e-25 121.7 239 60.7
CDE04G3036 Ceratophyllum demersum HOM05D006755 ORTHO05D008472 2.1e-25 120.9 299 53.5
Sabra04G0141300 Salix brachista HOM05D006755 ORTHO05D008472 2.7e-25 120.6 287 55.4
Aqoxy6G03058 Aquilegia oxysepala HOM05D006755 ORTHO05D008472 4.6e-25 119.8 305 52.8
Nn6g31560 Nelumbo nucifera HOM05D006755 ORTHO05D008472 7.9e-25 119.0 331 49.8
Peaxi162Scf00193g00005 Petunia axillaris HOM05D006755 ORTHO05D008472 1.0e-24 118.6 327 50.8
Manes.15G113000 Manihot esculenta HOM05D006755 ORTHO05D008472 1.8e-24 117.9 323 51.1
AUR62010217 Chenopodium quinoa HOM05D006755 ORTHO05D008472 2.3e-24 117.5 312 51.6
Ciclev10028759m.g Citrus clementina HOM05D006755 ORTHO05D008472 8.7e-24 115.5 301 54.2
AUR62013213 Chenopodium quinoa HOM05D006755 ORTHO05D008472 1.9e-23 114.4 276 55.4
CsaV3_7G002250 Cucumis sativus L. HOM05D006755 ORTHO05D008472 2.8e-22 110.5 288 53.8
AT4G38150 Arabidopsis thaliana HOM05D006755 ORTHO05D008472 4.8e-22 109.8 130 46.9
MELO3C024165.2 Cucumis melo HOM05D006755 ORTHO05D008472 1.1e-21 108.6 288 54.5
MBI01_g31986_MAGBIO Magnolia biondii HOM05D006755 ORTHO05D008472 3.1e-21 107.1 233 59.7
Potri.004G209500 Populus trichocarpa HOM05D006755 ORTHO05D008472 5.3e-21 106.3 274 53.6
Sed0010179 Sechium edule HOM05D006755 ORTHO05D008472 1.2e-20 105.1 294 51.4
Nn3g19301 Nelumbo nucifera HOM05D006755 ORTHO05D008472 1.5e-20 104.8 60 81.7
MD05G1145100 Malus domestica HOM05D006755 ORTHO05D008472 2.6e-20 104.0 273 55.7
Sc18g0006850 Simmondsia chinensis HOM05D006755 ORTHO05D008472 1.0e-19 102.1 313 50.8
Actinidia20592 Actinidia chinensis HOM05D006755 ORTHO05D008472 1.3e-19 101.7 58 81.0
Nn1g06229 Nelumbo nucifera HOM05D006755 ORTHO05D008472 1.7e-19 101.3 60 81.7
SEGI_20822 Sequoiadendron giganteum HOM05D006755 ORTHO05D008472 2.2e-19 100.9 209 62.7
Sed0025141 Sechium edule HOM05D006755 ORTHO05D008472 1.4e-18 98.2 223 30.0
ATR0605G371 Amborella trichopoda HOM05D006755 ORTHO05D008472 4.2e-18 96.7 114 50.9
Haze_01948 Corylus avellana HOM05D006755 ORTHO05D008472 7.2e-18 95.9 126 47.6
Hund00104 Selenicereus undatus HOM05D006755 ORTHO05D001720 1.4e-16 91.7 178 40.4
ClCG02G003160 Citrullus lanatus HOM05D006755 ORTHO05D008472 5.1e-16 89.7 250 53.2
GSVIVG01023844001 Vitis vinifera HOM05D006755 ORTHO05D008472 5.1e-16 89.7 234 30.3
Nn6g31556 Nelumbo nucifera HOM05D006755 ORTHO05D008472 3.3e-15 87.0 172 50.6
FvH4_2g17180 Fragaria vesca HOM05D006755 ORTHO05D008472 9.7e-15 85.5 227 56.4
Ah.01g017780 Amaranthus hybridus HOM05D006755 ORTHO05D008472 9.1e-13 79.0 292 49.0
FAN27G0618 Fragaria x ananassa HOM05D006755 ORTHO05D008472 9.1e-13 79.0 227 55.5
RcHm_v2.0_Chr6g0281671 Rosa chinensis HOM05D006755 ORTHO05D008472 1.5e-12 78.2 143 39.9
FAN15G2937 Fragaria x ananassa HOM05D006755 ORTHO05D008472 2.6e-12 77.4 227 55.1
ATR0693G165 Amborella trichopoda HOM05D002804 ORTHO05D003755 2.9e-11 73.9 75 48.0
Nn5g27913 Nelumbo nucifera HOM05D002804 ORTHO05D003755 6.5e-11 72.8 60 51.7
TAR636G2693 Trochodendron aralioides HOM05D002804 ORTHO05D003755 1.1e-10 72.0 65 49.2
Lj6P318T4 Lonicera japonica HOM05D006755 ORTHO05D008472 3.2e-10 70.5 38 86.8
PSO170G1624 Papaver somniferum HOM05D002804 ORTHO05D003755 3.6e-09 67.0 66 48.5
PSO357G0404 Papaver somniferum HOM05D002804 ORTHO05D003755 3.6e-09 67.0 66 48.5
Cpa.g.sc14.234 Carica papaya HOM05D002804 ORTHO05D003755 1.0e-08 65.5 65 46.2
FAN05G1021 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.8e-08 64.7 60 48.3
PGSC0003DMG400018230 Solanum tuberosum HOM05D002804 ORTHO05D003755 3.9e-08 63.5 75 41.3
Manes.04G038100 Manihot esculenta HOM05D002804 ORTHO05D003755 5.2e-08 63.2 75 44.0
Lsat_1_v5_gn_9_84161 Lactuca sativa HOM05D002804 ORTHO05D003755 8.8e-08 62.4 65 43.1
Os06g0308200 Oryza sativa ssp. japonica HOM05D002804 ORTHO05D003755 1.1e-07 62.0 64 40.6
MD05G1145400 Malus domestica HOM05D006755 ORTHO05D008472 1.5e-07 61.6 37 81.1
Rhsim11G0111400 Rhododendron simsii HOM05D002962 ORTHO05D003280 2.0e-07 61.2 65 41.5
Nn5g27110 Nelumbo nucifera HOM05D006755 ORTHO05D008472 2.6e-07 60.8 146 63.0
Peaxi162Scf00194g00625 Petunia axillaris HOM05D002804 ORTHO05D003755 2.6e-07 60.8 75 41.3
Peaxi162Scf00194g00635 Petunia axillaris HOM05D002804 ORTHO05D003755 2.6e-07 60.8 75 41.3
Eucgr.B01359 Eucalyptus grandis HOM05D002804 ORTHO05D003755 3.3e-07 60.5 65 41.5
RcHm_v2.0_Chr3g0459231 Rosa chinensis HOM05D002804 ORTHO05D003755 5.7e-07 59.7 75 40.0
Sabra13G0000100 Salix brachista HOM05D002804 ORTHO05D003755 5.7e-07 59.7 61 45.9
PGR119G1767 Punica granatum HOM05D002804 ORTHO05D003755 9.7e-07 58.9 75 40.0
TPR.G3051 Trifolium pratense HOM05D002804 ORTHO05D003755 1.3e-06 58.5 66 40.9
Aqoxy1G02792 Aquilegia oxysepala HOM05D002804 ORTHO05D003755 2.2e-06 57.8 158 23.4
Lj5g0005878 Lotus japonicus HOM05D002804 ORTHO05D003755 2.8e-06 57.4 61 44.3
Oeu053880.1 Olea europaea HOM05D043847 ORTHO05D008472 3.7e-06 57.0 46 58.7


User provided reference genes

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