Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G3457 Erigeron canadensis HOM05D003171 ORTHO05D000921 1.2e-146 523.1 258 100.0
ECA246G1509 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.4e-110 402.5 216 93.1
Lsat_1_v5_gn_1_68500 Lactuca sativa HOM05D003171 ORTHO05D000921 5.3e-49 198.7 212 47.6
Lsat_1_v5_gn_5_73681 Lactuca sativa HOM05D003171 ORTHO05D000921 6.9e-49 198.4 216 48.6
Lsat_1_v5_gn_9_41001 Lactuca sativa HOM05D003171 ORTHO05D000921 1.4e-36 157.5 194 44.8
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 2.4e-33 146.7 215 39.1
Lsat_1_v5_gn_8_44140 Lactuca sativa HOM05D003171 ORTHO05D000921 9.1e-33 144.8 161 47.2
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 3.3e-27 126.3 215 35.8
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 6.3e-26 122.1 216 35.2
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 1.8e-25 120.6 216 34.7
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 5.3e-25 119.0 218 31.7
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 1.9e-22 110.5 219 34.2
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 4.2e-22 109.4 223 30.9
Glyma.02G173400 Glycine max HOM05D003171 ORTHO05D000921 2.1e-21 107.1 217 28.6
Lsat_1_v5_gn_8_117200 Lactuca sativa HOM05D003171 ORTHO05D000921 1.4e-20 104.4 127 48.0
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 2.0e-19 100.5 217 29.5
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 9.7e-19 98.2 223 26.9
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 1.3e-18 97.8 219 30.1
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 2.8e-18 96.7 218 29.8
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 2.8e-18 96.7 226 31.4
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 2.8e-18 96.7 226 31.4
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 2.8e-18 96.7 226 31.9
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 6.3e-18 95.5 228 30.7
PGR031G3489 Punica granatum HOM05D003171 ORTHO05D000921 8.2e-18 95.1 216 29.6
MD03G1270400 Malus domestica HOM05D003171 ORTHO05D000921 7.7e-16 88.6 222 27.9
Dinv03278 Davidia involucrata HOM05D008473 ORTHO05D000921 2.9e-15 86.7 216 28.7
Medtr3g053640 Medicago truncatula HOM05D003171 ORTHO05D000921 2.9e-15 86.7 223 26.5
Prupe.8G054800 Prunus persica HOM05D003171 ORTHO05D000921 1.9e-14 84.0 242 27.7
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 3.2e-14 83.2 235 28.1
CANSAT54G2744 Cannabis sativa HOM05D003171 ORTHO05D000921 4.2e-14 82.8 229 29.3
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 4.2e-14 82.8 226 23.9
Hma1.2p1_0471F.1_g159430 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 9.4e-14 81.6 160 31.9
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.2e-13 81.3 223 29.1
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.2e-13 81.3 223 29.1
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.6e-13 80.9 125 39.2
PGR142G2608 Punica granatum HOM05D003171 ORTHO05D000921 1.6e-13 80.9 221 28.1
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 2.1e-13 80.5 218 27.1
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 2.1e-13 80.5 222 23.4
PGR102G1281 Punica granatum HOM05D003171 ORTHO05D000921 2.7e-13 80.1 221 27.6
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 3.6e-13 79.7 195 27.7
Ca_02097_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 3.6e-13 79.7 206 27.2
Oeu010697.1 Olea europaea HOM05D003171 ORTHO05D000921 4.7e-13 79.3 226 31.0
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 4.7e-13 79.3 223 29.6
PSO384G1197 Papaver somniferum HOM05D003171 ORTHO05D000921 4.7e-13 79.3 202 29.7
PGR102G0976 Punica granatum HOM05D003171 ORTHO05D000921 4.7e-13 79.3 221 27.6
TPR.G16880 Trifolium pratense HOM05D000665 ORTHO05D000921 1.4e-12 77.8 217 27.2
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.8e-12 77.4 213 29.1
COL.COLO4_13994 Corchorus olitorius HOM05D008473 ORTHO05D016003 1.8e-12 77.4 158 30.4
Dinv20245 Davidia involucrata HOM05D008473 ORTHO05D000921 4.0e-12 76.3 225 29.3
PGR031G0788 Punica granatum HOM05D003171 ORTHO05D000921 4.0e-12 76.3 232 28.0
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.2e-12 75.9 219 25.1
CSS0031995 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 6.8e-12 75.5 209 27.3
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 6.8e-12 75.5 189 29.1
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 8.8e-12 75.1 219 26.5
Dinv10275 Davidia involucrata HOM05D008473 ORTHO05D000921 1.2e-11 74.7 205 28.8
Ca_18689_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 1.5e-11 74.3 192 26.6
Ca_19984_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 4.4e-11 72.8 189 27.0
arahy.Tifrunner.gnm1.ann1.QX6E0G Arachis hypogaea HOM05D008473 ORTHO05D000921 7.5e-11 72.0 172 28.5
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 7.5e-11 72.0 224 25.4
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 7.5e-11 72.0 224 25.4
PGR102G0211 Punica granatum HOM05D003171 ORTHO05D000921 7.5e-11 72.0 212 27.4
PGR044G1317 Punica granatum HOM05D003171 ORTHO05D000921 9.8e-11 71.6 222 26.6
CANSAT01G1895 Cannabis sativa HOM05D003171 ORTHO05D000921 1.3e-10 71.2 151 30.5
FAN26G2385 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.7e-10 70.9 218 21.1
Dinv29345 Davidia involucrata HOM05D000665 ORTHO05D000921 2.8e-10 70.1 230 27.0
FvH4_1g11471 Fragaria vesca HOM05D000665 ORTHO05D003147 2.8e-10 70.1 222 25.2
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 2.8e-10 70.1 211 29.4
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 3.7e-10 69.7 220 26.8
CSS0039140 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 4.8e-10 69.3 227 27.3
CSS0041063 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 8.3e-10 68.6 217 27.6
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 8.3e-10 68.6 224 24.6
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.1e-09 68.2 229 26.2
MELO3C034280.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.4e-09 67.8 224 26.8
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 1.8e-09 67.4 233 23.6
TPR.G13935 Trifolium pratense HOM05D000665 ORTHO05D000921 1.8e-09 67.4 216 24.1
Cc01_g10760 Coffea canephora HOM05D000665 ORTHO05D000921 3.1e-09 66.6 230 25.7
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 3.1e-09 66.6 223 26.0
Ciclev10024555m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.4e-09 65.9 220 23.2
TWI75G0168 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 5.4e-09 65.9 233 26.6
TPR.G32241 Trifolium pratense HOM05D000984 ORTHO05D000921 7.0e-09 65.5 208 25.0
CANSAT01G1528 Cannabis sativa HOM05D000665 ORTHO05D000921 1.2e-08 64.7 151 29.1
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 1.6e-08 64.3 214 23.4
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 1.6e-08 64.3 219 26.0
HanXRQChr13g0396681 Helianthus annuus HOM05D000665 ORTHO05D000921 2.0e-08 63.9 229 24.0
TWI74G1594 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 2.0e-08 63.9 201 27.9
CSS0028686 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.5e-08 63.2 229 27.5
Glyma.17G029100 Glycine max HOM05D003171 ORTHO05D000921 3.5e-08 63.2 101 34.7
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.5e-08 62.8 219 23.3
TWI09G0766 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 5.9e-08 62.4 215 25.1
CSS0008427 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 7.7e-08 62.0 229 27.1
COL.COLO4_34139 Corchorus olitorius HOM05D003171 ORTHO05D000921 7.7e-08 62.0 147 29.3
Oeu059139.1 Olea europaea HOM05D003171 ORTHO05D000921 7.7e-08 62.0 79 40.5
CANSAT25G1420 Cannabis sativa HOM05D000665 ORTHO05D003147 1.0e-07 61.6 217 24.4
COL.COLO4_33426 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.0e-07 61.6 251 23.9
MELO3C028998.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.0e-07 61.6 211 24.2
Lj1g0016199 Lotus japonicus HOM05D007209 ORTHO05D000921 1.3e-07 61.2 218 24.3
PSO541G6499 Papaver somniferum HOM05D000665 ORTHO05D003147 1.3e-07 61.2 221 25.3
Nn3g16139 Nelumbo nucifera HOM05D000665 ORTHO05D000285 2.2e-07 60.5 219 25.6
Nn3g20404 Nelumbo nucifera HOM05D000665 ORTHO05D000285 2.2e-07 60.5 219 25.6
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 2.2e-07 60.5 219 25.1
Atru.chr10.354 Acer truncatum HOM05D028950 ORTHO05D000921 3.8e-07 59.7 181 26.0
Ciclev10010186m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.8e-07 59.7 233 23.6
CSS0047450 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 6.5e-07 58.9 230 25.2
FAN23G0960 Fragaria x ananassa HOM05D003171 ORTHO05D000921 6.5e-07 58.9 191 21.5
PSO170G5921 Papaver somniferum HOM05D000665 ORTHO05D003147 6.5e-07 58.9 216 25.0
Rhsim04G0014700 Rhododendron simsii HOM05D000665 ORTHO05D003147 6.5e-07 58.9 210 25.7
CSS0029683 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 8.5e-07 58.5 222 24.3
Hma1.2p1_2380F.1_g320966 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 8.5e-07 58.5 228 24.6
LjContig00141g0014815 Lotus japonicus HOM05D007209 ORTHO05D000921 8.5e-07 58.5 217 25.3
PSO170G0901 Papaver somniferum HOM05D000665 ORTHO05D003147 8.5e-07 58.5 221 24.4
Hma1.2p1_1786F.1_g302300 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 1.1e-06 58.2 221 24.0
GSVIVG01038689001 Vitis vinifera HOM05D000665 ORTHO05D000921 1.1e-06 58.2 218 26.6
AUR62037953 Chenopodium quinoa HOM05D007209 ORTHO05D000921 1.5e-06 57.8 220 25.0
COL.COLO4_05628 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.5e-06 57.8 224 23.7
CSS0004715 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.9e-06 57.4 230 24.8
CiPaw.10G092200 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.9e-06 57.4 139 30.9
Phvul.002G106800 Phaseolus vulgaris HOM05D000665 ORTHO05D003147 1.9e-06 57.4 222 23.9
Dinv34380 Davidia involucrata HOM05D008473 ORTHO05D000921 2.5e-06 57.0 136 32.4
Dinv10828 Davidia involucrata HOM05D008473 ORTHO05D000921 3.2e-06 56.6 161 29.8
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 3.2e-06 56.6 216 23.6
Lj2g0027355 Lotus japonicus HOM05D000665 ORTHO05D003147 3.2e-06 56.6 207 23.2
PSO170G2007 Papaver somniferum HOM05D000665 ORTHO05D003147 3.2e-06 56.6 218 24.3
Hund13763 Selenicereus undatus HOM05D000665 ORTHO05D000921 3.2e-06 56.6 209 25.4
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 3.2e-06 56.6 218 22.5
Haze_03773 Corylus avellana HOM05D000665 ORTHO05D003147 4.2e-06 56.2 210 25.2
Dinv14632 Davidia involucrata HOM05D008473 ORTHO05D000921 4.2e-06 56.2 123 33.3
Dinv26654 Davidia involucrata HOM05D008473 ORTHO05D000921 4.2e-06 56.2 101 33.7
Medtr1g094760 Medicago truncatula HOM05D001243 ORTHO05D000843 4.2e-06 56.2 222 23.4
Dinv30729 Davidia involucrata HOM05D008473 ORTHO05D000921 5.5e-06 55.8 127 29.9
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 5.5e-06 55.8 130 30.8
Glyma.11G078600 Glycine max HOM05D000665 ORTHO05D003147 5.5e-06 55.8 222 25.7
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 7.2e-06 55.5 229 22.7
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 7.2e-06 55.5 225 23.6
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 7.2e-06 55.5 225 23.6
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 7.2e-06 55.5 225 23.6
FAN22G1922 Fragaria x ananassa HOM05D003171 ORTHO05D000921 7.2e-06 55.5 183 21.3
CANSAT35G1351 Cannabis sativa HOM05D000665 ORTHO05D000921 9.4e-06 55.1 64 37.5
Ciclev10006620m.g Citrus clementina HOM05D003171 ORTHO05D000921 9.4e-06 55.1 185 25.4
Dinv32769 Davidia involucrata HOM05D008473 ORTHO05D000921 9.4e-06 55.1 123 33.3


User provided reference genes

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