Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G3350 Erigeron canadensis HOM05D005245 ORTHO05D006388 7.3e-147 523.9 262 100.0
HanXRQChr17g0560461 Helianthus annuus HOM05D005245 ORTHO05D006388 8.1e-29 131.7 184 40.2
ECA233G0823 Erigeron canadensis HOM05D005245 ORTHO05D006388 4.0e-28 129.4 236 35.2
Lsat_1_v5_gn_8_137601 Lactuca sativa HOM05D005245 ORTHO05D006388 2.6e-27 126.7 191 39.3
Rhsim04G0072600 Rhododendron simsii HOM05D005245 ORTHO05D006388 2.6e-27 126.7 217 35.5
Oeu031086.1 Olea europaea HOM05D005245 ORTHO05D006388 4.9e-26 122.5 223 35.4
Lj8C105T4 Lonicera japonica HOM05D005245 ORTHO05D006388 6.4e-26 122.1 223 35.4
HanXRQChr17g0554751 Helianthus annuus HOM05D005245 ORTHO05D006388 2.4e-25 120.2 215 34.4
Nitab4.5_0002629g0110 Nicotiana tabacum HOM05D005245 ORTHO05D006388 7.1e-25 118.6 220 33.6
Oeu000569.1 Olea europaea HOM05D005245 ORTHO05D006388 1.2e-24 117.9 212 35.8
TAR626G0262 Trochodendron aralioides HOM05D005245 ORTHO05D006388 1.6e-24 117.5 223 35.0
CSS0021355 Camellia sinensis var. sinensis HOM05D005245 ORTHO05D006388 2.1e-24 117.1 199 35.2
Dinv03891 Davidia involucrata HOM05D005245 ORTHO05D006388 2.7e-24 116.7 218 33.9
CiPaw.04G130500 Carya illinoinensis HOM05D005245 ORTHO05D006388 3.5e-24 116.3 197 36.0
Nitab4.5_0006823g0030 Nicotiana tabacum HOM05D005245 ORTHO05D006388 4.6e-24 115.9 222 34.2
CAN.G1543.11 Capsicum annuum HOM05D005245 ORTHO05D006388 7.8e-24 115.2 209 35.9
Hma1.2p1_0002F.1_g002540 Hydrangea macrophylla HOM05D005245 ORTHO05D006388 1.3e-23 114.4 207 34.8
TAR316G0002 Trochodendron aralioides HOM05D005245 ORTHO05D006388 1.7e-23 114.0 217 35.0
FAN09G0613 Fragaria x ananassa HOM05D005245 ORTHO05D006388 2.3e-23 113.6 228 32.5
Migut.M00189 Erythranthe guttata HOM05D005245 ORTHO05D006388 3.9e-23 112.8 208 35.6
Nn1g09000 Nelumbo nucifera HOM05D005245 ORTHO05D006388 3.9e-23 112.8 226 33.6
RcHm_v2.0_Chr2g0128861 Rosa chinensis HOM05D005245 ORTHO05D006388 3.9e-23 112.8 228 33.3
Cfa014695 Carpinus fangiana HOM05D005245 ORTHO05D006388 1.1e-22 111.3 228 34.2
Haze_13315 Corylus avellana HOM05D005245 ORTHO05D006388 1.5e-22 110.9 228 33.3
CANSAT64G0642 Cannabis sativa HOM05D005245 ORTHO05D006388 4.3e-22 109.4 196 35.7
ClCG02G018020 Citrullus lanatus HOM05D005245 ORTHO05D006388 4.3e-22 109.4 198 34.3
FvH4_6g27000 Fragaria vesca HOM05D005245 ORTHO05D006388 5.6e-22 109.0 228 31.1
Peaxi162Scf00189g00017 Petunia axillaris HOM05D005245 ORTHO05D006388 7.3e-22 108.6 200 37.0
Sopen07g027400 Solanum pennellii HOM05D005245 ORTHO05D006388 1.2e-21 107.8 200 35.5
Actinidia39337 Actinidia chinensis HOM05D005245 ORTHO05D006388 2.1e-21 107.1 223 32.7
Prupe.8G044600 Prunus persica HOM05D005245 ORTHO05D006388 3.6e-21 106.3 210 34.8
Actinidia30446 Actinidia chinensis HOM05D005245 ORTHO05D006388 6.2e-21 105.5 197 34.0
Cpa.g.sc209.10 Carica papaya HOM05D005245 ORTHO05D006388 6.2e-21 105.5 207 35.7
PGSC0003DMG400009404 Solanum tuberosum HOM05D005245 ORTHO05D006388 6.2e-21 105.5 199 34.7
Manes.13G138100 Manihot esculenta HOM05D005245 ORTHO05D006388 1.4e-20 104.4 192 33.3
GSVIVG01020660001 Vitis vinifera HOM05D005245 ORTHO05D006388 3.1e-20 103.2 215 33.5
CsaV3_6G015240 Cucumis sativus L. HOM05D005245 ORTHO05D006388 5.2e-20 102.4 215 33.5
Oeu036088.3 Olea europaea HOM05D005245 ORTHO05D006388 5.2e-20 102.4 187 35.3
Sc12g0003330 Simmondsia chinensis HOM05D005245 ORTHO05D006388 6.8e-20 102.1 196 34.7
PGR042G2390 Punica granatum HOM05D005245 ORTHO05D006388 1.2e-19 101.3 191 35.1
Sed0004663 Sechium edule HOM05D005245 ORTHO05D006388 2.0e-19 100.5 198 34.8
MD17G1128800 Malus domestica HOM05D005245 ORTHO05D006388 2.6e-19 100.1 197 34.5
PSO339G1987 Papaver somniferum HOM05D005245 ORTHO05D006388 2.6e-19 100.1 221 30.8
PSO384G4553 Papaver somniferum HOM05D005245 ORTHO05D006388 2.6e-19 100.1 219 30.1
QL08p043062 Quercus lobata HOM05D005245 ORTHO05D006388 2.6e-19 100.1 199 35.7
Lalb_Chr19g0134981 Lupinus albus HOM05D005245 ORTHO05D006388 3.4e-19 99.8 186 34.4
MD09G1139300 Malus domestica HOM05D005245 ORTHO05D006388 3.4e-19 99.8 185 35.7
SalBow7G1067 Salvia bowleyana HOM05D005245 ORTHO05D006388 3.4e-19 99.8 212 31.1
Thecc.01G241800 Theobroma cacao HOM05D005245 ORTHO05D006388 3.4e-19 99.8 223 33.6
SGA_v2.0_scaffold106G30663 Striga asiatica HOM05D005245 ORTHO05D006388 4.4e-19 99.4 199 32.7
Ciclev10014152m.g Citrus clementina HOM05D005245 ORTHO05D006388 7.6e-19 98.6 225 32.9
Eucgr.A01888 Eucalyptus grandis HOM05D005245 ORTHO05D006388 9.9e-19 98.2 217 33.2
Hund00957 Selenicereus undatus HOM05D005245 ORTHO05D006388 1.3e-18 97.8 196 34.7
Ah.01g003870 Amaranthus hybridus HOM05D005245 ORTHO05D006388 1.7e-18 97.4 192 34.4
arahy.Tifrunner.gnm1.ann1.BT5S0A Arachis hypogaea HOM05D005245 ORTHO05D006388 2.2e-18 97.1 218 32.1
AT2G42370 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 2.9e-18 96.7 203 32.0
DCAR_006629 Daucus carota HOM05D005245 ORTHO05D006388 2.9e-18 96.7 185 35.1
arahy.Tifrunner.gnm1.ann1.MS8YUN Arachis hypogaea HOM05D005245 ORTHO05D006388 3.8e-18 96.3 218 31.7
TPR.G14943 Trifolium pratense HOM05D005245 ORTHO05D006388 4.9e-18 95.9 204 31.4
Lalb_Chr03g0029811 Lupinus albus HOM05D005245 ORTHO05D006388 6.4e-18 95.5 194 31.4
PSO782G4194 Papaver somniferum HOM05D005245 ORTHO05D006388 8.4e-18 95.1 187 33.7
Lalb_Chr01g0005921 Lupinus albus HOM05D005245 ORTHO05D006388 1.1e-17 94.7 214 31.8
PSO063G4059 Papaver somniferum HOM05D005245 ORTHO05D006388 1.4e-17 94.4 187 32.6
Potri.013G119700 Populus trichocarpa HOM05D005245 ORTHO05D006388 1.4e-17 94.4 216 32.4
TWI23G1119 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 1.4e-17 94.4 202 31.2
BcaC08g44897 Brassica carinata HOM05D005245 ORTHO05D006388 1.9e-17 94.0 203 33.0
A07p23880 Brassica napus HOM05D005245 ORTHO05D006388 1.9e-17 94.0 203 33.0
BraA07t30041Z Brassica rapa HOM05D005245 ORTHO05D006388 1.9e-17 94.0 203 33.0
SHI10497 Sapria himalayana HOM05D005245 ORTHO05D006388 1.9e-17 94.0 218 30.3
TWI59G0121 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 1.9e-17 94.0 204 30.4
C06p25110 Brassica napus HOM05D005245 ORTHO05D006388 2.4e-17 93.6 203 33.0
BolC6t37670H Brassica oleracea HOM05D005245 ORTHO05D006388 2.4e-17 93.6 203 33.0
AUR62038992 Chenopodium quinoa HOM05D005245 ORTHO05D006388 3.2e-17 93.2 191 33.5
Sabra13G0101100 Salix brachista HOM05D005245 ORTHO05D006388 5.4e-17 92.4 221 31.7
Sabra19G0105000 Salix brachista HOM05D005245 ORTHO05D006388 5.4e-17 92.4 228 32.0
Ca_18900_v3 Cicer arietinum L. HOM05D005245 ORTHO05D006388 9.3e-17 91.7 200 33.5
Phvul.011G116900 Phaseolus vulgaris HOM05D005245 ORTHO05D006388 9.3e-17 91.7 199 32.2
RcHm_v2.0_Chr5g0053351 Rosa chinensis HOM05D005245 ORTHO05D006388 9.3e-17 91.7 212 30.2
unitig_899.g15324 Utricularia gibba HOM05D005245 ORTHO05D006388 9.3e-17 91.7 194 29.9
AUR62024070 Chenopodium quinoa HOM05D005245 ORTHO05D006388 1.2e-16 91.3 205 32.2
CARHR137420 Cardamine hirsuta HOM05D005245 ORTHO05D006388 2.1e-16 90.5 201 32.8
DCAR_025312 Daucus carota HOM05D005245 ORTHO05D006388 2.1e-16 90.5 189 32.8
MBI06_g25721_MAGBIO Magnolia biondii HOM05D005245 ORTHO05D006388 2.1e-16 90.5 217 30.4
Duzib264G0025 Durio zibethinus HOM05D005245 ORTHO05D006388 2.7e-16 90.1 200 30.5
Glyma.06G284801 Glycine max HOM05D005245 ORTHO05D006388 2.7e-16 90.1 200 31.5
EL10Ac9g20856 Beta vulgaris HOM05D005245 ORTHO05D006388 3.5e-16 89.7 167 34.1
BcaB02g07550 Brassica carinata HOM05D005245 ORTHO05D006388 4.6e-16 89.4 203 31.5
BcaB02g07551 Brassica carinata HOM05D005245 ORTHO05D006388 4.6e-16 89.4 203 31.5
Potri.019G091700 Populus trichocarpa HOM05D005245 ORTHO05D006388 4.6e-16 89.4 213 33.3
FvH4_3g11260 Fragaria vesca HOM05D005245 ORTHO05D006388 1.3e-15 87.8 198 31.3
Lj3g0023683 Lotus japonicus HOM05D005245 ORTHO05D006388 1.3e-15 87.8 207 30.4
Aqoxy1G02205 Aquilegia oxysepala HOM05D005245 ORTHO05D006388 1.7e-15 87.4 205 31.7
VMungo1127G0185 Vigna mungo HOM05D005245 ORTHO05D006388 1.7e-15 87.4 196 30.1
Atru.chr6.2836 Acer truncatum HOM05D005245 ORTHO05D006388 2.3e-15 87.0 228 30.3
CARHR168460 Cardamine hirsuta HOM05D005245 ORTHO05D006388 3.0e-15 86.7 215 31.2
Thhalv10005785m.g Eutrema salsugineum HOM05D005245 ORTHO05D006388 3.0e-15 86.7 205 31.7
Psat7g166560 Pisum sativum HOM05D005245 ORTHO05D006388 3.0e-15 86.7 188 31.9
Sp5g04610 Schrenkiella parvula HOM05D005245 ORTHO05D006388 3.9e-15 86.3 203 31.5
AT3G58110 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 5.1e-15 85.9 200 31.5
AL5G39800 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 8.7e-15 85.1 203 30.0
Gohir.A10G153600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 1.1e-14 84.7 175 34.3
Gorai.011G124400 Gossypium raimondii HOM05D005245 ORTHO05D006388 1.1e-14 84.7 175 34.3
Carub.0005s2496 Capsella rubella HOM05D005245 ORTHO05D006388 1.9e-14 84.0 203 29.6
THA.LOC104822691 Tarenaya hassleriana HOM05D005245 ORTHO05D006388 1.9e-14 84.0 218 30.3
ATR0602G272 Amborella trichopoda HOM05D005245 ORTHO05D006388 3.3e-14 83.2 211 30.8
Gohir.D10G112600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 5.6e-14 82.4 175 33.7
AL4G40790 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 9.6e-14 81.6 200 31.0
Lalb_Chr22g0356801 Lupinus albus HOM05D005245 ORTHO05D006388 9.6e-14 81.6 214 27.6
CDE10G0023 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 4.8e-13 79.3 213 29.1
TAR627G0756 Trochodendron aralioides HOM05D005245 ORTHO05D006388 8.1e-13 78.6 125 38.4
Solyc07g053440.4 Solanum lycopersicum HOM05D005245 ORTHO05D006388 1.5e-11 74.3 179 31.8
BcaC08g44896 Brassica carinata HOM05D005245 ORTHO05D006388 1.3e-10 71.2 180 31.7
FAN21G3056 Fragaria x ananassa HOM05D005245 ORTHO05D006388 2.9e-10 70.1 185 28.6
HPP92_005198 Vanilla planifolia HOM05D005245 ORTHO05D006388 6.4e-10 68.9 209 26.3
Dinv19977 Davidia involucrata HOM05D005245 ORTHO05D006388 3.2e-09 66.6 168 29.2
Cc05_g08020 Coffea canephora HOM05D005245 ORTHO05D006388 4.2e-09 66.2 75 44.0
Cc02_g14370 Coffea canephora HOM05D005245 ORTHO05D006388 6.0e-08 62.4 196 26.0
SEGI_35055 Sequoiadendron giganteum HOM05D005245 ORTHO05D006388 7.8e-08 62.0 161 29.8
Glyma.12G121100 Glycine max HOM05D005245 ORTHO05D006388 1.0e-07 61.6 104 36.5


User provided reference genes

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