Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 2.1e-272 941.8 494 100.0
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 1.0e-173 614.0 537 65.9
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 1.1e-151 540.8 503 62.4
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 1.8e-117 427.2 587 47.9
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.1e-114 417.9 559 48.3
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 3.2e-111 406.4 553 48.1
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 6.0e-110 402.1 548 47.3
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 1.8e-109 400.6 521 48.2
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 1.3e-107 394.4 544 46.5
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 4.0e-106 389.4 544 47.4
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 5.8e-105 385.6 546 47.6
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.9e-104 383.3 537 46.2
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 2.9e-104 383.3 535 46.4
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 6.5e-104 382.1 550 45.8
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.4e-103 380.9 535 46.2
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 1.9e-103 380.6 528 46.2
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 1.6e-102 377.5 536 45.9
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 1.0e-101 374.8 507 45.6
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 1.3e-101 374.4 548 44.9
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 1.3e-101 374.4 537 46.7
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 3.9e-101 372.9 595 43.2
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 6.7e-101 372.1 538 46.1
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 1.1e-100 371.3 532 45.9
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 1.1e-100 371.3 649 42.5
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 4.3e-100 369.4 532 45.5
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 5.7e-100 369.0 558 47.0
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 9.7e-100 368.2 511 47.0
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 2.8e-99 366.7 533 45.8
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 3.7e-99 366.3 590 44.2
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 4.8e-99 365.9 529 44.8
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 4.8e-99 365.9 524 46.0
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 3.1e-98 363.2 546 45.2
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 5.3e-98 362.5 537 45.3
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 1.5e-97 360.9 545 44.4
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 2.6e-97 360.1 555 43.2
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 4.5e-97 359.4 577 43.0
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 4.5e-97 359.4 593 42.7
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 7.7e-97 358.6 530 42.1
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.8e-96 356.3 535 45.8
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 8.5e-96 355.1 534 43.6
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.9e-95 354.0 534 43.6
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 2.5e-95 353.6 532 44.2
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 2.5e-95 353.6 540 43.7
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 4.2e-95 352.8 535 45.0
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 1.2e-94 351.3 538 44.2
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 3.6e-94 349.7 535 43.2
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 3.6e-94 349.7 518 44.0
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 4.6e-94 349.4 531 43.3
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 6.1e-94 349.0 531 44.4
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 1.8e-93 347.4 532 43.4
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 3.9e-93 346.3 526 42.8
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.9e-93 346.3 531 44.3
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.0e-92 344.0 593 42.3
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 3.3e-92 343.2 600 41.5
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 4.3e-92 342.8 540 43.5
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 1.3e-91 341.3 540 42.0
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 3.1e-90 336.7 514 43.2
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 2.6e-89 333.6 565 40.9
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 1.7e-88 330.9 460 46.5
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 7.2e-87 325.5 510 43.3
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 2.3e-85 320.5 499 43.9
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 8.8e-85 318.5 535 40.7
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.3e-83 314.7 608 40.1
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 2.4e-82 310.5 520 38.3
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 5.9e-81 305.8 548 39.1
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 1.4e-79 301.2 372 51.3
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 3.2e-79 300.1 543 39.2
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 2.1e-78 297.4 592 39.7
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 2.8e-75 287.0 505 38.4
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 2.0e-73 280.8 537 36.3
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 4.5e-73 279.6 609 36.1
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 5.9e-73 279.3 550 35.6
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 7.7e-73 278.9 474 39.0
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.9e-71 274.2 446 43.7
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 3.6e-70 270.0 449 43.2
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 4.8e-67 259.6 555 34.6
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 1.6e-62 244.6 508 38.0
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 3.6e-62 243.4 422 40.0
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 1.4e-61 241.5 456 38.4
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 3.7e-59 233.4 440 38.9
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 4.8e-59 233.0 471 36.5
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 1.4e-53 214.9 301 47.8
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 2.3e-40 171.0 538 28.8
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.4e-37 161.8 408 31.9
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 4.0e-37 160.2 412 37.6
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 1.4e-34 151.8 473 29.0
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 6.0e-33 146.4 347 36.6
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 1.5e-31 141.7 411 30.4
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 8.9e-29 132.5 128 50.0
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 2.6e-28 131.0 532 26.1
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 8.3e-27 125.9 221 39.4
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 1.2e-20 105.5 163 42.3
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 1.2e-20 105.5 78 67.9
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 4.2e-18 97.1 181 39.8
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 4.2e-18 97.1 181 39.8
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 4.2e-18 97.1 176 39.2
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.8e-13 81.6 172 35.5
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 5.6e-07 60.1 57 56.1
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 7.3e-07 59.7 452 21.5
VMungo1215G1054 Vigna mungo HOM05D002884 ORTHO05D003178 1.3e-06 58.9 101 30.7
Sc22g0000260 Simmondsia chinensis HOM05D002884 ORTHO05D003178 2.8e-06 57.8 95 32.6
Gohir.A09G193001 Gossypium hirsutum HOM05D002884 ORTHO05D003178 3.6e-06 57.4 90 34.4
SalBow6G0746 Salvia bowleyana HOM05D002884 ORTHO05D003178 6.2e-06 56.6 70 37.1
Glyma.17G131100 Glycine max HOM05D002884 ORTHO05D003178 8.1e-06 56.2 95 32.6


User provided reference genes

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