Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 4.9e-83 311.2 173 100.0
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 1.1e-63 246.9 173 79.8
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 1.6e-57 226.5 173 68.2
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 1.1e-55 220.3 173 68.8
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 4.3e-39 165.2 176 55.1
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 4.3e-39 165.2 176 55.7
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 9.7e-39 164.1 175 53.1
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 1.7e-38 163.3 173 54.3
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 2.8e-38 162.5 173 52.6
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 8.2e-38 161.0 173 52.0
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 1.4e-37 160.2 173 53.8
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 4.1e-37 158.7 175 55.4
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 4.1e-37 158.7 164 54.9
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 3.4e-36 155.6 174 52.9
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 3.4e-36 155.6 175 50.9
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 2.2e-35 152.9 174 54.6
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 2.2e-35 152.9 173 51.4
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 5.0e-35 151.8 173 50.9
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 5.0e-35 151.8 173 50.3
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 8.5e-35 151.0 172 49.4
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 8.5e-35 151.0 173 52.0
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 1.4e-34 150.2 173 48.6
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 1.9e-34 149.8 173 49.7
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 1.9e-34 149.8 172 51.7
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 2.5e-34 149.4 173 50.9
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 3.2e-34 149.1 173 51.4
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 3.2e-34 149.1 173 51.4
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 5.5e-34 148.3 173 50.3
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 2.1e-33 146.4 173 50.3
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 2.7e-33 146.0 172 47.7
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 5.1e-32 141.7 173 48.6
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 8.8e-32 141.0 175 47.4
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 8.8e-32 141.0 173 48.0
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 2.0e-31 139.8 173 45.7
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 2.6e-31 139.4 173 48.6
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 2.6e-31 139.4 171 48.0
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 3.3e-31 139.0 170 47.6
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 9.7e-31 137.5 176 51.1
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 8.2e-30 134.4 175 44.0
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 1.4e-29 133.7 175 45.7
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 4.1e-29 132.1 173 44.5
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 4.1e-29 132.1 175 46.9
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 5.3e-29 131.7 173 44.5
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 7.0e-29 131.3 173 42.8
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 7.0e-29 131.3 178 45.5
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 7.0e-29 131.3 173 45.7
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 9.1e-29 131.0 175 44.0
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 5.9e-28 128.3 173 43.9
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 1.7e-27 126.7 173 43.4
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 1.7e-27 126.7 165 43.6
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 5.0e-27 125.2 173 41.6
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 6.5e-27 124.8 173 42.8
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 6.5e-27 124.8 171 42.1
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 8.5e-27 124.4 181 41.4
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 8.5e-27 124.4 176 42.0
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 1.1e-26 124.0 165 43.0
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 2.5e-26 122.9 176 47.2
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 7.2e-26 121.3 173 41.0
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 1.6e-25 120.2 173 42.2
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 2.1e-25 119.8 173 42.8
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 2.1e-25 119.8 183 43.2
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 3.6e-25 119.0 173 42.8
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 3.6e-25 119.0 178 43.3
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 3.6e-25 119.0 175 43.4
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 4.7e-25 118.6 173 41.0
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 6.1e-25 118.2 173 41.0
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 6.1e-25 118.2 141 48.2
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 3.0e-24 115.9 147 45.6
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 6.7e-24 114.8 174 42.0
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 8.8e-24 114.4 178 42.7
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 8.8e-24 114.4 178 42.7
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 1.1e-23 114.0 182 40.7
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 2.6e-23 112.8 176 39.2
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 2.6e-23 112.8 176 39.2
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 5.7e-23 111.7 146 47.9
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 1.3e-22 110.5 172 37.2
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 1.7e-22 110.2 172 37.2
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 1.7e-22 110.2 172 37.2
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 1.7e-22 110.2 172 37.2
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 1.7e-22 110.2 173 42.2
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 8.2e-22 107.8 133 45.1
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 2.4e-21 106.3 203 35.5
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 3.1e-21 105.9 123 49.6
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 4.1e-21 105.5 183 39.3
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 5.3e-21 105.1 149 41.6
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 1.2e-20 104.0 168 41.7
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 2.0e-20 103.2 181 37.6
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.3e-19 100.5 180 36.1
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 2.9e-19 99.4 186 39.8
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 5.0e-19 98.6 181 37.6
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 6.5e-19 98.2 179 36.9
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 1.2e-17 94.0 114 49.1
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 1.6e-17 93.6 130 44.6
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 2.1e-17 93.2 138 44.9
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 1.0e-16 90.9 181 34.8
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 1.0e-16 90.9 186 34.9
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 2.3e-16 89.7 116 47.4
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 3.0e-16 89.4 186 38.7
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 5.2e-16 88.6 125 40.8
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 7.5e-15 84.7 145 38.6
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 1.7e-14 83.6 116 41.4
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 2.8e-14 82.8 139 36.7
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 4.8e-14 82.0 174 33.3
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 5.4e-13 78.6 177 35.6
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 2.2e-11 73.2 109 38.5
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 3.8e-11 72.4 70 54.3
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 1.5e-10 70.5 173 31.2
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 2.1e-09 66.6 161 32.3
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 2.7e-09 66.2 88 44.3
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 1.2e-07 60.8 84 42.9
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 2.6e-07 59.7 86 43.0
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 3.4e-07 59.3 102 36.3
CiPaw.05G217800 Carya illinoinensis HOM05D006478 ORTHO05D008071 4.4e-07 58.9 73 45.2
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 7.5e-07 58.2 167 27.5
Lj1g0017005 Lotus japonicus HOM05D006478 ORTHO05D008071 1.7e-06 57.0 143 31.5
VMungo1127G0460 Vigna mungo HOM05D006478 ORTHO05D008071 3.7e-06 55.8 133 28.6


User provided reference genes

Program Settings