Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 2.0e-124 449.1 224 100.0
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 6.8e-101 370.9 226 82.3
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 6.5e-96 354.4 212 82.5
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 1.2e-81 307.0 219 66.7
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 2.0e-81 306.2 224 68.3
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 4.6e-81 305.1 213 68.5
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 5.9e-81 304.7 228 67.5
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 5.9e-81 304.7 224 67.9
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 1.5e-79 300.1 226 66.4
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 5.6e-79 298.1 219 66.7
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 1.6e-78 296.6 214 68.7
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 3.6e-78 295.4 230 65.2
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 1.0e-77 293.9 215 66.0
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 5.2e-77 291.6 211 68.2
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 1.2e-76 290.4 215 65.6
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 2.0e-76 289.7 214 65.0
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 5.8e-76 288.1 220 62.7
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.7e-75 286.6 222 65.3
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 1.7e-75 286.6 233 61.8
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 2.2e-75 286.2 226 63.7
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 3.7e-75 285.4 222 63.1
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 4.1e-74 282.0 213 66.7
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 4.1e-74 282.0 213 63.4
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 5.4e-74 281.6 224 60.7
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 9.2e-74 280.8 219 61.6
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.2e-73 280.4 223 63.7
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 2.0e-73 279.6 209 64.1
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 3.5e-73 278.9 217 64.1
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 7.8e-73 277.7 220 64.1
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 1.0e-72 277.3 215 64.2
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 1.3e-72 276.9 229 59.4
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 1.3e-72 276.9 209 64.1
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 1.7e-72 276.6 222 62.6
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 2.3e-72 276.2 211 63.5
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 3.0e-72 275.8 226 59.3
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 5.0e-72 275.0 224 60.3
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 6.6e-72 274.6 222 62.2
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 6.6e-72 274.6 215 62.3
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 8.6e-72 274.2 209 62.7
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.5e-71 273.5 225 60.0
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 1.9e-71 273.1 225 60.0
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 1.9e-71 273.1 215 62.8
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 2.5e-71 272.7 233 59.2
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 2.5e-71 272.7 215 62.8
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 5.6e-71 271.6 214 62.6
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 7.3e-71 271.2 215 63.3
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 7.3e-71 271.2 216 62.0
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 9.5e-71 270.8 210 62.4
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 1.6e-70 270.0 214 62.1
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 1.6e-70 270.0 213 62.0
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.6e-70 270.0 222 61.7
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.1e-70 269.6 224 59.8
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 2.8e-70 269.2 187 67.9
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 2.8e-70 269.2 214 61.2
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 6.2e-70 268.1 213 61.0
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 6.2e-70 268.1 224 58.9
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 8.1e-70 267.7 215 61.4
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 8.1e-70 267.7 217 59.0
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 1.4e-69 266.9 223 57.4
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 2.3e-69 266.2 210 61.4
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 3.1e-69 265.8 214 61.2
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 4.0e-69 265.4 225 61.3
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 4.0e-69 265.4 228 59.2
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 5.2e-69 265.0 215 59.5
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 6.8e-69 264.6 212 62.3
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 6.8e-69 264.6 213 59.6
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 8.9e-69 264.2 214 60.3
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 1.2e-68 263.8 217 61.8
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 2.6e-68 262.7 214 60.3
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 5.8e-68 261.5 207 65.2
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 9.8e-68 260.8 224 56.7
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 2.9e-67 259.2 225 56.9
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 2.9e-67 259.2 226 55.8
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 4.9e-67 258.5 236 55.9
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 1.1e-66 257.3 218 58.3
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 3.2e-66 255.8 226 55.3
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 4.1e-66 255.4 214 57.9
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 5.4e-66 255.0 223 55.2
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 5.4e-66 255.0 219 57.5
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 1.2e-65 253.8 217 57.1
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 7.8e-65 251.1 217 57.6
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 1.0e-64 250.8 218 56.4
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 2.3e-64 249.6 214 56.5
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 5.1e-64 248.4 224 54.9
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 1.1e-63 247.3 216 56.5
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 3.3e-63 245.7 224 54.5
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 7.3e-63 244.6 228 53.5
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 9.5e-63 244.2 218 55.5
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 9.5e-63 244.2 219 56.6
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 1.2e-62 243.8 210 57.1
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 1.2e-62 243.8 210 57.1
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 1.2e-62 243.8 210 57.1
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 1.6e-62 243.4 219 56.6
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 8.1e-62 241.1 228 53.9
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 1.1e-61 240.7 278 47.1
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 1.8e-61 240.0 190 62.1
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 2.6e-60 236.1 213 54.5
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 4.4e-60 235.3 220 55.5
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 1.3e-59 233.8 225 53.3
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 4.6e-57 225.3 144 74.3
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 1.5e-55 220.3 225 52.4
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 3.4e-52 209.1 155 61.9
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.3e-51 207.2 139 71.9
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 4.9e-51 205.3 143 69.9
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 4.9e-51 205.3 213 52.1
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 6.0e-49 198.4 143 63.6
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.3e-48 196.4 143 65.7
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 6.6e-48 194.9 120 79.2
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 1.1e-47 194.1 214 47.2
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 5.1e-40 168.7 213 45.1
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 6.9e-37 158.3 114 65.8
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 1.1e-31 141.0 192 40.6
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 2.8e-14 83.2 181 32.0
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 1.1e-13 81.3 132 39.4
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 1.0e-08 64.7 208 29.3
HanXRQChr10g0291701 Helianthus annuus HOM05D006861 ORTHO05D008620 6.7e-08 62.0 113 33.6
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.7e-06 57.4 54 53.7


User provided reference genes

Program Settings