Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 6.1e-68 260.8 138 100.0
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 2.9e-30 135.6 120 64.2
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 4.7e-28 128.3 108 70.4
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 4.0e-27 125.2 133 54.9
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 1.2e-26 123.6 134 55.2
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 3.7e-25 118.6 134 52.2
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 6.3e-25 117.9 143 52.4
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 3.2e-24 115.5 133 51.1
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 2.3e-22 109.4 135 51.1
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 5.0e-22 108.2 140 49.3
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 5.0e-22 108.2 145 51.0
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 6.6e-22 107.8 139 50.4
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 6.6e-22 107.8 139 50.4
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 6.6e-22 107.8 139 49.6
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 6.6e-22 107.8 136 52.2
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 1.5e-21 106.7 137 48.9
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 2.5e-21 105.9 140 49.3
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 6.1e-20 101.3 132 50.0
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 8.0e-20 100.9 136 47.1
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 1.8e-19 99.8 140 47.9
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 1.8e-19 99.8 135 48.9
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 3.1e-19 99.0 140 52.1
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 4.0e-19 98.6 136 46.3
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 1.5e-18 96.7 114 51.8
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.5e-18 96.7 140 48.6
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 3.4e-18 95.5 134 51.5
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 3.4e-18 95.5 137 46.0
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 9.8e-18 94.0 140 47.9
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 9.8e-18 94.0 140 47.9
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 1.3e-17 93.6 125 43.2
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 1.7e-17 93.2 138 46.4
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.9e-17 92.4 134 44.8
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.9e-17 92.4 134 44.8
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.9e-17 92.4 131 45.8
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 2.9e-17 92.4 131 46.6
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 4.9e-17 91.7 141 48.9
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 6.4e-17 91.3 131 48.9
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 1.1e-16 90.5 122 47.5
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.1e-16 90.5 139 44.6
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 1.4e-16 90.1 141 46.1
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 1.4e-16 90.1 100 54.0
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 1.9e-16 89.7 135 45.9
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 1.9e-16 89.7 125 49.6
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 3.2e-16 89.0 135 44.4
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 4.1e-16 88.6 139 42.4
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 5.4e-16 88.2 125 43.2
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 9.2e-16 87.4 136 43.4
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 1.2e-15 87.0 122 45.1
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 1.2e-15 87.0 134 41.8
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 1.2e-15 87.0 132 42.4
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 1.6e-15 86.7 126 48.4
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 2.0e-15 86.3 136 47.1
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 2.0e-15 86.3 138 42.0
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 2.7e-15 85.9 136 46.3
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 2.7e-15 85.9 134 45.5
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 2.7e-15 85.9 138 46.4
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 4.6e-15 85.1 132 47.0
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 4.6e-15 85.1 144 45.1
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 1.0e-14 84.0 105 50.5
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.3e-14 83.6 118 48.3
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 1.7e-14 83.2 122 42.6
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 1.7e-14 83.2 137 43.8
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 3.0e-14 82.4 134 45.5
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 8.6e-14 80.9 122 44.3
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 2.5e-13 79.3 146 40.4
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 2.5e-13 79.3 125 40.8
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 3.3e-13 79.0 120 44.2
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 4.3e-13 78.6 121 43.0
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 5.6e-13 78.2 121 47.1
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 1.6e-12 76.6 137 39.4
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 2.1e-12 76.3 138 40.6
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 2.8e-12 75.9 134 42.5
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 6.2e-12 74.7 134 45.5
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 6.2e-12 74.7 136 41.9
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 8.1e-12 74.3 129 41.9
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 1.4e-11 73.6 130 39.2
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 1.8e-11 73.2 126 40.5
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 1.8e-11 73.2 132 40.9
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 2.3e-11 72.8 90 46.7
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 2.3e-11 72.8 90 46.7
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 4.0e-11 72.0 114 46.5
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 5.2e-11 71.6 127 40.9
Peaxi162Scf00020g00322 Petunia axillaris HOM05D000509 ORTHO05D006393 5.2e-11 71.6 78 55.1
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 2.0e-10 69.7 128 40.6
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 2.0e-10 69.7 135 37.0
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 3.4e-10 68.9 140 39.3
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 3.4e-10 68.9 145 37.2
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 3.4e-10 68.9 107 47.7
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 3.4e-10 68.9 91 44.0
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 3.4e-10 68.9 132 38.6
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 1.3e-09 67.0 148 37.2
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.3e-09 67.0 134 41.0
Os08g0559700 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D006393 3.7e-09 65.5 115 40.9
AUR62001076 Chenopodium quinoa HOM05D000509 ORTHO05D006393 4.9e-09 65.1 166 34.3
DCAR_015993 Daucus carota HOM05D000509 ORTHO05D006393 4.9e-09 65.1 87 51.7
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 4.9e-09 65.1 134 40.3
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 4.9e-09 65.1 134 40.3
Sed0001004 Sechium edule HOM05D000509 ORTHO05D006393 4.9e-09 65.1 145 39.3
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 6.4e-09 64.7 119 37.8
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 6.4e-09 64.7 119 37.8
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 6.4e-09 64.7 87 40.2
Medtr8g095650 Medicago truncatula HOM05D000509 ORTHO05D006393 6.4e-09 64.7 92 51.1
Migut.B01755 Erythranthe guttata HOM05D000509 ORTHO05D006393 8.3e-09 64.3 130 36.2
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 1.4e-08 63.5 87 40.2
CARHR171710 Cardamine hirsuta HOM05D000509 ORTHO05D006393 1.4e-08 63.5 88 43.2
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 2.4e-08 62.8 157 36.3
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 3.2e-08 62.4 101 43.6
MELO3C021209.2 Cucumis melo HOM05D000509 ORTHO05D006393 5.4e-08 61.6 135 36.3
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 5.4e-08 61.6 118 42.4
FAN01G0359 Fragaria x ananassa HOM05D000509 ORTHO05D006393 7.1e-08 61.2 138 38.4
Ah.12g064210 Amaranthus hybridus HOM05D000509 ORTHO05D006393 2.1e-07 59.7 107 41.1
BcaC02g10220 Brassica carinata HOM05D000509 ORTHO05D006393 2.1e-07 59.7 92 40.2
C04p31370 Brassica napus HOM05D000509 ORTHO05D006393 2.1e-07 59.7 95 38.9
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 2.1e-07 59.7 78 46.2
AT3G61370 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 3.5e-07 58.9 120 36.7
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 4.6e-07 58.5 139 36.0
A04p01140 Brassica napus HOM05D000509 ORTHO05D006393 1.0e-06 57.4 127 33.9
BraA04t15830Z Brassica rapa HOM05D000509 ORTHO05D006393 1.0e-06 57.4 124 34.7
GSVIVG01003391001 Vitis vinifera HOM05D000509 ORTHO05D006393 1.0e-06 57.4 108 43.5
Glyma.09G259300 Glycine max HOM05D000509 ORTHO05D006393 3.0e-06 55.8 73 45.2
PSO782G0796 Papaver somniferum HOM05D000509 ORTHO05D006393 5.1e-06 55.1 141 36.2


User provided reference genes

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