Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2815 Erigeron canadensis HOM05D003173 ORTHO05D003546 6.4e-154 547.4 273 100.0
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 1.1e-76 290.8 292 60.3
HanXRQChr12g0366681 Helianthus annuus HOM05D003173 ORTHO05D003546 9.8e-62 241.1 252 57.5
Lsat_1_v5_gn_2_6961 Lactuca sativa HOM05D003173 ORTHO05D003546 1.3e-61 240.7 294 50.7
ECA238G0569 Erigeron canadensis HOM05D000315 ORTHO05D000527 3.4e-54 216.1 276 47.1
HanXRQChr14g0428491 Helianthus annuus HOM05D003173 ORTHO05D003546 6.0e-51 205.3 270 48.9
HanXRQChr12g0366691 Helianthus annuus HOM05D003173 ORTHO05D003546 4.9e-45 185.7 269 45.4
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 8.4e-37 158.3 279 38.7
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 2.1e-35 153.7 291 39.2
Hma1.2p1_0023F.1_g015790 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 4.6e-35 152.5 270 35.9
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 7.8e-35 151.8 282 39.7
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 3.0e-34 149.8 281 38.1
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 3.9e-34 149.4 272 40.1
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 1.5e-33 147.5 284 38.4
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 1.9e-33 147.1 284 36.6
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 2.5e-33 146.7 281 40.6
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 3.3e-33 146.4 282 36.9
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 3.3e-33 146.4 287 38.3
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.3e-32 144.4 287 38.0
Ciclev10002153m.g Citrus clementina HOM05D003173 ORTHO05D003546 6.2e-32 142.1 290 36.6
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.1e-31 141.4 277 38.3
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.8e-31 140.6 288 38.9
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 2.4e-31 140.2 273 38.5
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 3.1e-31 139.8 299 35.8
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 3.1e-31 139.8 288 38.5
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 4.0e-31 139.4 283 36.0
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 4.0e-31 139.4 277 40.1
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 6.9e-31 138.7 289 38.1
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 6.9e-31 138.7 284 37.7
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 6.9e-31 138.7 272 36.4
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 1.5e-30 137.5 276 38.4
CANSAT25G2829 Cannabis sativa HOM05D003173 ORTHO05D003546 2.0e-30 137.1 290 34.8
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.6e-30 136.7 287 37.3
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 4.5e-30 136.0 298 37.6
Dinv31893 Davidia involucrata HOM05D003173 ORTHO05D003546 5.8e-30 135.6 278 35.3
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 1.7e-29 134.0 282 37.2
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 2.2e-29 133.7 278 36.3
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 2.2e-29 133.7 279 38.4
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 2.9e-29 133.3 277 34.3
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 4.9e-29 132.5 283 35.3
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 8.4e-29 131.7 279 37.3
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.4e-28 131.0 278 35.6
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 1.4e-28 131.0 289 35.3
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.4e-28 130.2 288 36.1
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 3.2e-28 129.8 278 37.1
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 7.1e-28 128.6 277 39.0
Nitab4.5_0000498g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 1.6e-27 127.5 283 32.9
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 2.1e-27 127.1 288 36.8
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 2.7e-27 126.7 270 36.7
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 3.5e-27 126.3 281 35.9
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 3.5e-27 126.3 282 35.8
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 4.6e-27 125.9 294 34.4
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 4.6e-27 125.9 286 36.0
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 1.0e-26 124.8 271 37.3
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 1.3e-26 124.4 282 36.2
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.3e-26 124.4 279 37.3
arahy.Tifrunner.gnm1.ann1.WLLD0D Arachis hypogaea HOM05D003173 ORTHO05D003546 1.8e-26 124.0 294 33.0
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 1.8e-26 124.0 281 36.3
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 3.9e-26 122.9 270 34.8
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 5.1e-26 122.5 276 36.6
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 6.7e-26 122.1 281 35.6
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 6.7e-26 122.1 285 35.1
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 6.7e-26 122.1 289 36.0
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 8.7e-26 121.7 285 34.4
Lalb_Chr03g0033561 Lupinus albus HOM05D003173 ORTHO05D003546 1.1e-25 121.3 270 34.1
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 1.5e-25 120.9 284 33.5
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.5e-25 120.9 284 35.6
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 1.9e-25 120.6 271 35.1
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 7.4e-25 118.6 282 34.4
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 9.6e-25 118.2 237 35.9
Nitab4.5_0002353g0090 Nicotiana tabacum HOM05D003173 ORTHO05D003546 9.6e-25 118.2 284 33.1
Sopen12g031280 Solanum pennellii HOM05D003173 ORTHO05D003546 9.6e-25 118.2 287 32.8
Atru.chr13.216 Acer truncatum HOM05D003173 ORTHO05D003546 1.6e-24 117.5 303 32.0
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 2.8e-24 116.7 289 35.6
Solyc12g094390.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 3.7e-24 116.3 283 33.6
CAN.G401.21 Capsicum annuum HOM05D003173 ORTHO05D003546 4.8e-24 115.9 287 31.7
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 8.1e-24 115.2 288 34.7
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 1.1e-23 114.8 284 34.2
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 1.4e-23 114.4 288 34.4
TPR.G26427 Trifolium pratense HOM05D003173 ORTHO05D003546 1.4e-23 114.4 281 35.2
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 1.8e-23 114.0 284 34.2
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 2.4e-23 113.6 281 34.2
PGSC0003DMG400029419 Solanum tuberosum HOM05D003173 ORTHO05D003546 2.4e-23 113.6 285 32.3
Migut.C00894 Erythranthe guttata HOM05D003173 ORTHO05D003546 4.0e-23 112.8 281 33.8
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 4.0e-23 112.8 271 33.6
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 5.3e-23 112.5 279 35.1
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 6.9e-23 112.1 295 35.6
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 6.9e-23 112.1 295 34.6
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 6.9e-23 112.1 295 35.9
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 9.0e-23 111.7 273 31.1
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 1.2e-22 111.3 270 33.0
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 1.2e-22 111.3 283 35.0
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 3.4e-22 109.8 271 34.7
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 5.8e-22 109.0 283 32.9
Ca_13485_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 5.8e-22 109.0 281 32.4
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 5.8e-22 109.0 292 34.9
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.3e-21 107.8 263 36.5
SGA_v2.0_scaffold19G08585 Striga asiatica HOM05D003173 ORTHO05D003546 1.7e-21 107.5 280 33.2
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 2.2e-21 107.1 282 33.0
Peaxi162Scf00064g00081 Petunia axillaris HOM05D003173 ORTHO05D003546 2.9e-21 106.7 283 33.2
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 8.4e-21 105.1 284 34.9
Oeu039861.1 Olea europaea HOM05D003173 ORTHO05D003546 1.1e-20 104.8 204 36.8
Oeu057579.1 Olea europaea HOM05D003173 ORTHO05D003546 1.1e-20 104.8 204 36.8
Lalb_Chr08g0246301 Lupinus albus HOM05D003173 ORTHO05D003546 1.4e-20 104.4 226 33.2
PSO675G7160 Papaver somniferum HOM05D003173 ORTHO05D003546 1.9e-20 104.0 269 31.2
TPR.G38194 Trifolium pratense HOM05D003173 ORTHO05D003546 4.2e-20 102.8 282 32.3
Sp1g18040 Schrenkiella parvula HOM05D003173 ORTHO05D003546 7.1e-20 102.1 259 30.5
Carub.0002s2296 Capsella rubella HOM05D003173 ORTHO05D003546 1.3e-18 97.8 296 29.4
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 2.3e-18 97.1 284 34.9
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 5.1e-18 95.9 302 33.8
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 8.7e-18 95.1 206 33.5
Lj5g0013533 Lotus japonicus HOM05D003173 ORTHO05D003546 8.7e-18 95.1 273 32.6
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 1.1e-17 94.7 276 31.9
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 1.5e-17 94.4 305 32.5
Lalb_Chr01g0008491 Lupinus albus HOM05D003173 ORTHO05D003546 1.9e-17 94.0 272 34.6
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 2.5e-17 93.6 222 36.9
ATR0661G366 Amborella trichopoda HOM05D003173 ORTHO05D003546 3.3e-17 93.2 266 33.1
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 4.3e-17 92.8 288 32.3
DCAR_009512 Daucus carota HOM05D003173 ORTHO05D003546 9.6e-17 91.7 250 34.0
DCAR_025088 Daucus carota HOM05D003173 ORTHO05D003546 9.6e-17 91.7 269 33.1
BolC7t42850H Brassica oleracea HOM05D003173 ORTHO05D003546 1.6e-16 90.9 245 30.6
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 2.1e-16 90.5 244 33.2
A07p15740 Brassica napus HOM05D003173 ORTHO05D003546 8.2e-16 88.6 246 31.3
A07p15840 Brassica napus HOM05D003173 ORTHO05D003546 8.2e-16 88.6 246 31.3
BraA07t29310Z Brassica rapa HOM05D003173 ORTHO05D003546 8.2e-16 88.6 246 31.3
AL2G36110 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 1.1e-15 88.2 287 29.3
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 1.1e-15 88.2 293 29.0
Thhalv10009337m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 1.4e-15 87.8 258 27.9
Sp5g31190 Schrenkiella parvula HOM05D003173 ORTHO05D003546 4.1e-15 86.3 298 28.9
Ca_15466_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 5.3e-15 85.9 132 42.4
Sc15g0004670 Simmondsia chinensis HOM05D003173 ORTHO05D003546 5.3e-15 85.9 270 29.3
BcaNung03372 Brassica carinata HOM05D003173 ORTHO05D003546 1.2e-14 84.7 245 30.2
C07p23130 Brassica napus HOM05D003173 ORTHO05D003546 1.2e-14 84.7 245 30.2
BraA06t24743Z Brassica rapa HOM05D003173 ORTHO05D003546 2.6e-14 83.6 259 27.4
AT1G76070 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 3.4e-14 83.2 297 29.0
BraA07t31692Z Brassica rapa HOM05D003173 ORTHO05D003546 3.4e-14 83.2 286 30.4
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 4.5e-14 82.8 298 28.2
Aa31LG4G6190 Aethionema arabicum HOM05D003173 ORTHO05D003546 5.8e-14 82.4 294 28.9
A06p16390 Brassica napus HOM05D003173 ORTHO05D003546 5.8e-14 82.4 259 27.4
Carub.0001s1981 Capsella rubella HOM05D003173 ORTHO05D003546 7.6e-14 82.0 276 30.1
BcaB03g14324 Brassica carinata HOM05D003173 ORTHO05D003546 1.0e-13 81.6 241 32.0
BcaC05g25935 Brassica carinata HOM05D003173 ORTHO05D003546 1.0e-13 81.6 268 26.1
C05p18890 Brassica napus HOM05D003173 ORTHO05D003546 1.0e-13 81.6 268 26.1
BolC5t30588H Brassica oleracea HOM05D003173 ORTHO05D003546 1.0e-13 81.6 268 26.5
THA.LOC104811444 Tarenaya hassleriana HOM05D003173 ORTHO05D003546 1.0e-13 81.6 235 31.1
AL1G33140 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 1.3e-13 81.3 250 31.2
BcaC08g47100 Brassica carinata HOM05D003173 ORTHO05D003546 1.7e-13 80.9 245 29.4
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 1.7e-13 80.9 280 27.1
BcaB07g32036 Brassica carinata HOM05D003173 ORTHO05D003546 2.2e-13 80.5 281 28.5
Ah.00g000650 Amaranthus hybridus HOM05D003173 ORTHO05D003546 5.0e-13 79.3 122 37.7
Thhalv10018992m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 6.5e-13 79.0 303 28.4
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 6.5e-13 79.0 273 31.1
BolC6t40040H Brassica oleracea HOM05D003173 ORTHO05D003546 1.1e-12 78.2 286 29.0
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 1.1e-12 78.2 240 29.2
AT1G20310 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 1.4e-12 77.8 271 28.8
BcaC03g15643 Brassica carinata HOM05D003173 ORTHO05D003546 1.4e-12 77.8 273 27.5
BolC2t09356H Brassica oleracea HOM05D003173 ORTHO05D003546 1.4e-12 77.8 273 27.5
Zm00001eb103980 Zea mays HOM05D003173 ORTHO05D003546 1.9e-12 77.4 241 29.0
C02p33480 Brassica napus HOM05D003173 ORTHO05D003546 2.5e-12 77.0 273 27.8
unitig_32.g11393 Utricularia gibba HOM05D002221 ORTHO05D002626 2.5e-12 77.0 96 44.8
A07p41630 Brassica napus HOM05D003173 ORTHO05D003546 5.5e-12 75.9 287 27.9
HPP92_002481 Vanilla planifolia HOM05D003173 ORTHO05D003546 9.3e-12 75.1 238 28.6
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 2.7e-11 73.6 267 29.6
GSVIVG01008738001 Vitis vinifera HOM05D003173 ORTHO05D003546 2.7e-11 73.6 207 31.4
CARHR020790 Cardamine hirsuta HOM05D003173 ORTHO05D003546 1.0e-10 71.6 255 26.7
Sed0006911 Sechium edule HOM05D003173 ORTHO05D003546 2.3e-10 70.5 274 28.1
BcaC08g47302 Brassica carinata HOM05D003173 ORTHO05D003546 3.0e-10 70.1 241 27.4
SHI08021 Sapria himalayana HOM05D003173 ORTHO05D003546 3.9e-10 69.7 261 26.8
BcaB05g24968 Brassica carinata HOM05D003173 ORTHO05D003546 8.7e-10 68.6 280 27.9
SHI05037 Sapria himalayana HOM05D003173 ORTHO05D003546 1.5e-09 67.8 261 26.8
SHI13075 Sapria himalayana HOM05D003173 ORTHO05D003546 2.5e-09 67.0 261 26.8
Os09g0542900 Oryza sativa ssp. japonica HOM05D003173 ORTHO05D003546 3.3e-09 66.6 246 29.7
TWI73G0798 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 9.7e-09 65.1 222 31.1
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 4.8e-08 62.8 268 28.0
Aa31LG7G4670 Aethionema arabicum HOM05D003173 ORTHO05D003546 1.4e-07 61.2 202 29.7
CDE05G2702 Ceratophyllum demersum HOM05D003173 ORTHO05D003546 1.4e-07 61.2 255 28.6
MBI17_g07971_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 6.9e-07 58.9 239 28.5
COL.COLO4_22498 Corchorus olitorius HOM05D003173 ORTHO05D003546 1.2e-06 58.2 197 27.4
Lj4g0015450 Lotus japonicus HOM05D003173 ORTHO05D003546 4.5e-06 56.2 100 39.0


User provided reference genes

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