Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 2.1e-52 208.8 104 100.0
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 1.4e-37 159.5 101 84.2
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 9.3e-37 156.8 101 80.2
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 2.7e-28 128.6 96 70.8
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 8.7e-27 123.6 96 63.5
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 7.4e-26 120.6 93 64.5
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 1.3e-25 119.8 96 61.5
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 2.1e-25 119.0 95 61.1
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 2.1e-25 119.0 96 62.5
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 3.7e-25 118.2 94 63.8
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 3.7e-25 118.2 98 63.3
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 8.2e-25 117.1 97 60.8
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 8.2e-25 117.1 94 62.8
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 8.2e-25 117.1 94 62.8
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 1.4e-24 116.3 95 62.1
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.4e-24 116.3 94 62.8
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.4e-24 116.3 94 62.8
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.1e-24 115.2 96 58.3
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 3.1e-24 115.2 93 58.1
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 4.1e-24 114.8 94 61.7
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 4.1e-24 114.8 96 58.3
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 4.1e-24 114.8 96 58.3
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 4.1e-24 114.8 93 61.3
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 4.1e-24 114.8 93 61.3
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 6.9e-24 114.0 93 62.4
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 9.0e-24 113.6 95 60.0
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 1.5e-23 112.8 94 59.6
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 1.5e-23 112.8 100 56.0
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.0e-23 112.5 93 59.1
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 3.4e-23 111.7 93 61.3
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 3.4e-23 111.7 100 55.0
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 3.4e-23 111.7 93 60.2
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 4.5e-23 111.3 95 62.1
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 4.5e-23 111.3 95 62.1
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 5.8e-23 110.9 94 62.8
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 1.0e-22 110.2 93 55.9
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 1.7e-22 109.4 96 57.3
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 1.7e-22 109.4 96 55.2
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.9e-22 108.6 94 59.6
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 3.8e-22 108.2 98 58.2
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 5.0e-22 107.8 98 56.1
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 6.5e-22 107.5 98 56.1
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 6.5e-22 107.5 102 60.8
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 8.4e-22 107.1 96 60.4
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 1.1e-21 106.7 100 56.0
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 1.4e-21 106.3 97 56.7
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 2.5e-21 105.5 94 58.5
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 2.5e-21 105.5 98 57.1
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 2.5e-21 105.5 99 54.5
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 3.2e-21 105.1 97 54.6
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 4.2e-21 104.8 98 56.1
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 4.2e-21 104.8 92 55.4
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 4.2e-21 104.8 93 57.0
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 4.2e-21 104.8 94 60.6
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 5.5e-21 104.4 92 56.5
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 5.5e-21 104.4 94 57.4
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 7.2e-21 104.0 94 57.4
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 7.2e-21 104.0 100 56.0
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 1.2e-20 103.2 97 54.6
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 1.2e-20 103.2 97 54.6
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 1.2e-20 103.2 88 60.2
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 1.2e-20 103.2 96 56.2
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 1.6e-20 102.8 102 52.9
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 1.6e-20 102.8 102 52.9
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 1.6e-20 102.8 94 55.3
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 1.6e-20 102.8 100 54.0
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 2.1e-20 102.4 94 57.4
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 2.1e-20 102.4 94 58.5
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 2.1e-20 102.4 94 55.3
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 3.5e-20 101.7 101 54.5
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 3.5e-20 101.7 98 52.0
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 3.5e-20 101.7 94 55.3
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 3.5e-20 101.7 101 52.5
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 4.6e-20 101.3 99 53.5
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 4.6e-20 101.3 97 53.6
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 6.1e-20 100.9 105 53.3
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 1.0e-19 100.1 98 55.1
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 1.0e-19 100.1 87 54.0
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.8e-19 99.4 95 56.8
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 1.8e-19 99.4 96 51.0
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 2.3e-19 99.0 102 52.0
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.3e-19 99.0 86 55.8
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 3.0e-19 98.6 94 52.1
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 3.0e-19 98.6 95 52.6
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.0e-19 98.6 95 54.7
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 3.9e-19 98.2 93 52.7
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 3.9e-19 98.2 94 54.3
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 5.1e-19 97.8 102 52.0
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 5.1e-19 97.8 100 52.0
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 6.7e-19 97.4 102 52.0
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 8.7e-19 97.1 107 51.4
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 8.7e-19 97.1 102 51.0
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 8.7e-19 97.1 102 51.0
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 8.7e-19 97.1 99 52.5
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 8.7e-19 97.1 97 52.6
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 8.7e-19 97.1 94 56.4
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 1.1e-18 96.7 104 50.0
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.5e-18 95.5 95 53.7
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 2.5e-18 95.5 96 50.0
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 3.3e-18 95.1 101 50.5
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 5.7e-18 94.4 100 51.0
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 5.7e-18 94.4 102 49.0
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 2.8e-17 92.0 101 50.5
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 2.8e-17 92.0 104 48.1
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 3.7e-17 91.7 96 51.0
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 4.8e-17 91.3 101 50.5
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 4.8e-17 91.3 102 49.0
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 4.8e-17 91.3 102 49.0
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 6.3e-17 90.9 99 51.5
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 8.2e-17 90.5 93 50.5
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 4.1e-16 88.2 102 48.0
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 4.1e-16 88.2 104 43.3
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 4.1e-16 88.2 93 49.5
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 9.0e-16 87.0 99 43.4
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 1.3e-14 83.2 92 47.8
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 1.7e-14 82.8 92 44.6
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 3.8e-14 81.6 94 42.6
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 5.0e-14 81.3 101 40.6
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 6.5e-14 80.9 104 43.3
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.9e-13 79.3 96 50.0
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 2.1e-12 75.9 101 40.6
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 4.6e-12 74.7 86 46.5
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 3.0e-11 72.0 104 39.4
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 4.3e-10 68.2 101 41.6
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 2.6e-07 58.9 50 58.0
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 7.7e-07 57.4 62 50.0


User provided reference genes

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