Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2741 Erigeron canadensis HOM05D003962 ORTHO05D004714 0.0e+00 1482.2 855 100.0
ECA246G1296 Erigeron canadensis HOM05D003962 ORTHO05D004714 2.4e-74 284.6 760 33.0
HanXRQChr07g0190851 Helianthus annuus HOM05D003962 ORTHO05D004714 1.2e-60 239.2 849 35.3
HanXRQChr17g0534811 Helianthus annuus HOM05D003962 ORTHO05D004714 2.6e-60 238.0 1003 32.6
Dinv38828 Davidia involucrata HOM05D003962 ORTHO05D004714 7.9e-57 226.5 719 29.8
Hma1.2p1_0359F.1_g135210 Hydrangea macrophylla HOM05D003962 ORTHO05D004714 1.0e-56 226.1 699 30.5
Lj2A167T45 Lonicera japonica HOM05D003962 ORTHO05D004714 2.4e-53 214.9 668 31.7
CSS0043367 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 3.1e-53 214.5 645 29.6
HanXRQChr06g0166431 Helianthus annuus HOM05D003962 ORTHO05D004714 6.9e-53 213.4 688 31.1
Dinv37529 Davidia involucrata HOM05D003962 ORTHO05D004714 3.5e-49 201.1 565 31.2
DCAR_029893 Daucus carota HOM05D003962 ORTHO05D004714 1.4e-45 189.1 822 27.4
GSVIVG01019537001 Vitis vinifera HOM05D003962 ORTHO05D005685 4.9e-43 180.6 764 30.9
Actinidia04199 Actinidia chinensis HOM05D003962 ORTHO05D004714 1.9e-42 178.7 607 29.0
CSS0016674 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 5.5e-42 177.2 474 29.5
CAN.G1804.9 Capsicum annuum HOM05D003962 ORTHO05D004714 2.1e-41 175.3 613 29.0
Rhsim02G0244100 Rhododendron simsii HOM05D003962 ORTHO05D004714 3.0e-40 171.4 619 28.8
vmacro11467 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.5e-39 169.1 692 28.3
Actinidia22731 Actinidia chinensis HOM05D003962 ORTHO05D004714 3.3e-39 167.9 772 26.9
Cc08_g16110 Coffea canephora HOM05D003962 ORTHO05D004714 1.6e-38 165.6 373 35.1
TAR629G3347 Trochodendron aralioides HOM05D003962 ORTHO05D004714 2.1e-38 165.2 579 27.8
Lsat_1_v5_gn_3_10880 Lactuca sativa HOM05D003962 ORTHO05D004714 3.7e-38 164.5 828 32.2
PGSC0003DMG400012278 Solanum tuberosum HOM05D003962 ORTHO05D004714 6.3e-38 163.7 591 28.8
CSS0006905 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 1.8e-37 162.2 367 34.3
Migut.A00639 Erythranthe guttata HOM05D003962 ORTHO05D004714 5.3e-37 160.6 648 29.0
Actinidia27315 Actinidia chinensis HOM05D003962 ORTHO05D004714 1.5e-36 159.1 543 29.1
Solyc08g082410.4 Solanum lycopersicum HOM05D003962 ORTHO05D004714 2.6e-36 158.3 588 28.1
Peaxi162Scf00074g00821 Petunia axillaris HOM05D003962 ORTHO05D004714 3.4e-36 157.9 605 28.9
Rhsim02G0244200 Rhododendron simsii HOM05D003962 ORTHO05D004714 1.2e-33 149.4 628 26.8
TAR636G0021 Trochodendron aralioides HOM05D003962 ORTHO05D004714 2.3e-32 145.2 338 34.0
Nitab4.5_0007367g0070 Nicotiana tabacum HOM05D003962 ORTHO05D004714 3.0e-32 144.8 683 27.1
Nn1g01866 Nelumbo nucifera HOM05D003962 ORTHO05D004714 1.5e-31 142.5 771 30.0
Nitab4.5_0001210g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 1.5e-31 142.5 551 29.2
Nitab4.5_0006775g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 2.5e-31 141.7 633 27.6
ClCG01G000470 Citrullus lanatus HOM05D003962 ORTHO05D004714 5.7e-31 140.6 381 30.7
Nitab4.5_0002944g0030 Nicotiana tabacum HOM05D003962 ORTHO05D004714 2.8e-30 138.3 698 25.8
TAR374G0911 Trochodendron aralioides HOM05D003962 ORTHO05D004714 3.7e-30 137.9 850 28.9
TAR375G1139 Trochodendron aralioides HOM05D003962 ORTHO05D004714 8.2e-30 136.7 312 34.3
CsaV3_5G000540 Cucumis sativus L. HOM05D003962 ORTHO05D004714 1.8e-29 135.6 385 30.1
MSTRG.25678 Avicennia marina HOM05D003962 ORTHO05D004714 3.1e-29 134.8 682 26.2
Oeu054025.1 Olea europaea HOM05D003962 ORTHO05D004714 9.0e-29 133.3 917 25.0
SGA_v2.0_scaffold305G47981 Striga asiatica HOM05D003962 ORTHO05D004714 1.2e-28 132.9 692 26.3
Nn3g19007 Nelumbo nucifera HOM05D003962 ORTHO05D004714 3.4e-28 131.3 694 25.9
MSTRG.13886 Avicennia marina HOM05D003962 ORTHO05D004714 7.7e-28 130.2 357 30.0
Eucgr.A01465 Eucalyptus grandis HOM05D003962 ORTHO05D004714 1.3e-27 129.4 402 28.6
SalBow1G2835 Salvia bowleyana HOM05D003962 ORTHO05D004714 1.3e-27 129.4 393 29.3
SalBow1G4038 Salvia bowleyana HOM05D003962 ORTHO05D004714 1.3e-27 129.4 393 29.3
CiPaw.05G251700 Carya illinoinensis HOM05D003962 ORTHO05D004714 5.5e-26 124.0 330 32.1
Oeu063516.1 Olea europaea HOM05D003962 ORTHO05D004714 7.2e-26 123.6 483 27.5
Potri.015G014800 Populus trichocarpa HOM05D003962 ORTHO05D004714 2.1e-25 122.1 555 26.7
MELO3C005882.2 Cucumis melo HOM05D003962 ORTHO05D004714 2.7e-25 121.7 569 25.8
Ciclev10004179m.g Citrus clementina HOM05D003962 ORTHO05D004714 3.6e-25 121.3 329 31.6
Sed0017272 Sechium edule HOM05D003962 ORTHO05D004714 4.6e-25 120.9 359 30.4
Potri.012G013800 Populus trichocarpa HOM05D003962 ORTHO05D004714 7.9e-25 120.2 369 30.1
Sabra15G0011900 Salix brachista HOM05D003962 ORTHO05D004714 7.9e-25 120.2 383 29.0
Sed0023111 Sechium edule HOM05D003962 ORTHO05D004714 7.9e-25 120.2 361 29.6
QL09p009481 Quercus lobata HOM05D003962 ORTHO05D004714 1.0e-24 119.8 388 30.2
TWI14G0330 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 1.4e-24 119.4 311 31.8
Haze_00190 Corylus avellana HOM05D003962 ORTHO05D004714 3.0e-24 118.2 332 30.1
TWI23G0430 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 3.9e-24 117.9 318 32.7
MBI06_g08468_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 5.1e-24 117.5 302 33.1
TWI39G0414 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 5.1e-24 117.5 351 30.2
Manes.14G006600 Manihot esculenta HOM05D003962 ORTHO05D004714 6.7e-24 117.1 386 30.6
MD07G1290200 Malus domestica HOM05D003962 ORTHO05D004714 1.5e-23 115.9 370 30.3
Aqoxy7G00097 Aquilegia oxysepala HOM05D003962 ORTHO05D004714 9.7e-23 113.2 305 31.5
vmacro11361 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.7e-22 112.5 526 26.2
Cpa.g.sc3.71 Carica papaya HOM05D003962 ORTHO05D004714 2.2e-22 112.1 467 27.8
Oeu009961.1 Olea europaea HOM05D003962 ORTHO05D004714 2.8e-22 111.7 884 24.9
MD01G1219900 Malus domestica HOM05D003962 ORTHO05D004714 6.3e-22 110.5 392 28.6
Cfa016250 Carpinus fangiana HOM05D003962 ORTHO05D004714 8.2e-22 110.2 391 27.9
Sabra12G0018000 Salix brachista HOM05D003962 ORTHO05D004714 1.8e-21 109.0 507 26.4
arahy.Tifrunner.gnm1.ann1.JYM9I0 Arachis hypogaea HOM05D003962 ORTHO05D004714 3.1e-21 108.2 404 30.0
COL.COLO4_11264 Corchorus olitorius HOM05D003962 ORTHO05D004714 3.1e-21 108.2 382 29.8
Ca_16697_v3 Cicer arietinum L. HOM05D003962 ORTHO05D004714 4.1e-21 107.8 633 25.1
Prupe.2G311300 Prunus persica HOM05D003962 ORTHO05D004714 4.1e-21 107.8 390 27.7
Aa31sc139G70 Aethionema arabicum HOM05D003962 ORTHO05D004714 5.3e-21 107.5 343 31.2
Manes.06G159800 Manihot esculenta HOM05D003962 ORTHO05D004714 5.3e-21 107.5 382 28.8
Atru.chr1.164 Acer truncatum HOM05D003962 ORTHO05D004714 6.9e-21 107.1 402 27.1
arahy.Tifrunner.gnm1.ann1.897SEY Arachis hypogaea HOM05D003962 ORTHO05D004714 9.1e-21 106.7 404 30.2
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 1.2e-20 106.3 269 30.5
CiPaw.06G010000 Carya illinoinensis HOM05D003962 ORTHO05D004714 2.6e-20 105.1 334 28.4
PSO135G0074 Papaver somniferum HOM05D003962 ORTHO05D004714 3.4e-20 104.8 445 27.9
Glyma.04G236700 Glycine max HOM05D003962 ORTHO05D004714 7.7e-20 103.6 403 29.5
PGR042G1008 Punica granatum HOM05D003962 ORTHO05D004714 7.7e-20 103.6 306 30.1
Thecc.03G196300 Theobroma cacao HOM05D003962 ORTHO05D004714 7.7e-20 103.6 611 25.2
PSO384G0521 Papaver somniferum HOM05D003962 ORTHO05D004714 1.7e-19 102.4 445 27.4
Duzib084G0525 Durio zibethinus HOM05D003962 ORTHO05D004714 2.2e-19 102.1 331 28.4
Sc19g0000840 Simmondsia chinensis HOM05D003962 ORTHO05D004714 2.2e-19 102.1 299 29.8
GSVIVG01038709001 Vitis vinifera HOM05D003962 ORTHO05D004714 2.9e-19 101.7 568 25.2
Prupe.5G120600 Prunus persica HOM05D003962 ORTHO05D004714 5.0e-19 100.9 417 25.4
MBI07_g07101_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 6.5e-19 100.5 397 29.2
AL8G28140 Arabidopsis lyrata HOM05D003962 ORTHO05D004714 1.1e-18 99.8 437 28.4
RcHm_v2.0_Chr1g0380961 Rosa chinensis HOM05D003962 ORTHO05D004714 2.5e-18 98.6 374 27.0
Lalb_Chr08g0240331 Lupinus albus HOM05D003962 ORTHO05D004714 3.2e-18 98.2 460 28.7
Ah.13g070110 Amaranthus hybridus HOM05D003962 ORTHO05D004714 4.2e-18 97.8 373 28.7
CANSAT21G2091 Cannabis sativa HOM05D003962 ORTHO05D004714 5.5e-18 97.4 394 29.2
Duzib205G1946 Durio zibethinus HOM05D003962 ORTHO05D004714 5.5e-18 97.4 330 29.4
Phvul.009G053600 Phaseolus vulgaris HOM05D003962 ORTHO05D004714 9.4e-18 96.7 390 30.8
AUR62006109 Chenopodium quinoa HOM05D003962 ORTHO05D004714 1.2e-17 96.3 355 27.3
EL10Ac3g05299 Beta vulgaris HOM05D003962 ORTHO05D004714 1.6e-17 95.9 299 28.1
Medtr3g091280 Medicago truncatula HOM05D003962 ORTHO05D004714 1.6e-17 95.9 542 26.4
THA.LOC104825141 Tarenaya hassleriana HOM05D003962 ORTHO05D004714 1.6e-17 95.9 327 29.7
VMungo1309G1284 Vigna mungo HOM05D003962 ORTHO05D004714 1.6e-17 95.9 469 27.9
FvH4_7g31740 Fragaria vesca HOM05D003962 ORTHO05D004714 2.7e-17 95.1 361 26.6
CARHR266560 Cardamine hirsuta HOM05D003962 ORTHO05D004714 3.6e-17 94.7 350 29.4
FAN06G4429 Fragaria x ananassa HOM05D003962 ORTHO05D004714 4.7e-17 94.4 304 28.6
Psat5g078120 Pisum sativum HOM05D003962 ORTHO05D004714 4.7e-17 94.4 380 27.4
AUR62019379 Chenopodium quinoa HOM05D003962 ORTHO05D004714 6.1e-17 94.0 295 28.8
FAN06G4230 Fragaria x ananassa HOM05D003962 ORTHO05D004714 6.1e-17 94.0 304 28.6
PSO170G0250 Papaver somniferum HOM05D003962 ORTHO05D004714 6.1e-17 94.0 848 24.9
Sc25g0000880 Simmondsia chinensis HOM05D003962 ORTHO05D004714 2.3e-16 92.0 290 28.6
FAN10G2253 Fragaria x ananassa HOM05D003962 ORTHO05D004714 3.9e-16 91.3 362 27.6
Sp6g15570 Schrenkiella parvula HOM05D003962 ORTHO05D004714 3.9e-16 91.3 434 28.8
Carub.0008s1360 Capsella rubella HOM05D003962 ORTHO05D004714 5.1e-16 90.9 452 25.7
TPR.G17287 Trifolium pratense HOM05D003962 ORTHO05D004714 1.1e-15 89.7 579 24.5
DCAR_006489 Daucus carota HOM05D003962 ORTHO05D004714 1.5e-15 89.4 504 25.6
FAN10G3613 Fragaria x ananassa HOM05D003962 ORTHO05D004714 2.6e-15 88.6 304 28.3
BcaC01g06252 Brassica carinata HOM05D003962 ORTHO05D004714 3.3e-15 88.2 370 26.5
Gohir.D11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 3.3e-15 88.2 302 30.1
AT5G53440 Arabidopsis thaliana HOM05D003962 ORTHO05D004714 4.4e-15 87.8 446 26.7
Gorai.007G015000 Gossypium raimondii HOM05D003962 ORTHO05D004714 9.7e-15 86.7 374 28.9
PSO063G5170 Papaver somniferum HOM05D003962 ORTHO05D004714 1.7e-14 85.9 850 23.9
THA.LOC104800296 Tarenaya hassleriana HOM05D003962 ORTHO05D004714 1.7e-14 85.9 540 24.1
Lalb_Chr23g0271551 Lupinus albus HOM05D003962 ORTHO05D004714 2.2e-14 85.5 435 26.0
Glyma.06G127600 Glycine max HOM05D003962 ORTHO05D004714 3.7e-14 84.7 577 26.5
Lalb_Chr11g0066791 Lupinus albus HOM05D003962 ORTHO05D004714 3.7e-14 84.7 403 28.3
SHI02385 Sapria himalayana HOM05D003962 ORTHO05D004714 3.7e-14 84.7 240 32.5
Ah.07g205820 Amaranthus hybridus HOM05D003962 ORTHO05D004714 4.8e-14 84.3 563 27.4
Thhalv10012484m.g Eutrema salsugineum HOM05D003962 ORTHO05D004714 4.8e-14 84.3 377 28.4
unitig_88.g27642 Utricularia gibba HOM05D003962 ORTHO05D004714 8.2e-14 83.6 465 24.7
Gohir.A11G014500 Gossypium hirsutum HOM05D003962 ORTHO05D004714 1.4e-13 82.8 301 28.9
HPP92_024026 Vanilla planifolia HOM05D003962 ORTHO05D004714 1.4e-13 82.8 536 26.3
FAN01G0781 Fragaria x ananassa HOM05D003962 ORTHO05D004714 2.4e-13 82.0 351 25.9
Oeu058004.1 Olea europaea HOM05D003962 ORTHO05D004714 2.4e-13 82.0 123 41.5
A03p15150 Brassica napus HOM05D003962 ORTHO05D004714 5.3e-13 80.9 518 24.9
Gohir.D11G014700 Gossypium hirsutum HOM05D003962 ORTHO05D004714 9.1e-13 80.1 402 25.1
Zm00001eb359440 Zea mays HOM05D003962 ORTHO05D004714 9.1e-13 80.1 299 25.8
Duzib068G0757 Durio zibethinus HOM05D003962 ORTHO05D004714 1.6e-12 79.3 407 25.1
BraA03t10810Z Brassica rapa HOM05D003962 ORTHO05D004714 2.0e-12 79.0 572 23.8
Lj1g0008504 Lotus japonicus HOM05D003962 ORTHO05D004714 2.0e-12 79.0 556 27.7
C03p17680 Brassica napus HOM05D003962 ORTHO05D004714 2.6e-12 78.6 518 24.7
BolC3t14179H Brassica oleracea HOM05D003962 ORTHO05D004714 2.6e-12 78.6 518 24.7
Gohir.A11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 3.5e-12 78.2 402 25.4
CDE10G1062 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 5.9e-12 77.4 357 25.2
ATR0602G039 Amborella trichopoda HOM05D003962 ORTHO05D004714 1.3e-11 76.3 313 30.7
BcaNung06205 Brassica carinata HOM05D003962 ORTHO05D004714 2.2e-11 75.5 567 24.0
vmacro11359 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 2.9e-11 75.1 97 43.3
vmacro11465 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 2.9e-11 75.1 97 43.3
CDE10G0926 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 5.0e-11 74.3 493 24.7
Duzib205G1416 Durio zibethinus HOM05D003962 ORTHO05D004714 8.5e-11 73.6 533 24.0
Gorai.007G015100 Gossypium raimondii HOM05D003962 ORTHO05D004714 1.1e-10 73.2 272 25.4
SEGI_14221 Sequoiadendron giganteum HOM05D003962 ORTHO05D004714 7.2e-10 70.5 498 23.9
Thhalv10026934m.g Eutrema salsugineum HOM05D003962 ORTHO05D004714 1.6e-09 69.3 353 25.2
FAN03G1461 Fragaria x ananassa HOM05D003962 ORTHO05D004714 1.5e-07 62.8 526 24.3
Os01g0655400 Oryza sativa ssp. japonica HOM05D003962 ORTHO05D004714 1.3e-06 59.7 617 21.9


User provided reference genes

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