Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2699 Erigeron canadensis HOM05D001483 ORTHO05D029297 3.8e-242 841.3 488 100.0
ECA233G4747 Erigeron canadensis HOM05D001483 ORTHO05D029297 6.7e-69 265.8 376 51.3
HanXRQChr08g0207791 Helianthus annuus HOM05D001483 ORTHO05D029297 3.4e-49 200.3 498 36.3
Lsat_1_v5_gn_8_147700 Lactuca sativa HOM05D001483 ORTHO05D029297 6.7e-45 186.0 544 28.1
Aa31sc377G20 Aethionema arabicum HOM05D001483 ORTHO05D001463 6.1e-14 83.2 115 40.9
BcaB05g24278 Brassica carinata HOM05D001483 ORTHO05D001463 6.8e-13 79.7 406 23.2
PGSC0003DMG400029107 Solanum tuberosum HOM05D001483 ORTHO05D001463 1.2e-12 79.0 109 40.4
THA.LOC104825508 Tarenaya hassleriana HOM05D001483 ORTHO05D001463 1.2e-12 79.0 113 39.8
Nitab4.5_0001404g0050 Nicotiana tabacum HOM05D001483 ORTHO05D001463 1.5e-12 78.6 114 38.6
Sopen05g010680 Solanum pennellii HOM05D001483 ORTHO05D001463 2.0e-12 78.2 108 39.8
Peaxi162Scf00518g00425 Petunia axillaris HOM05D001483 ORTHO05D001463 2.6e-12 77.8 115 38.3
Solyc05g015390.3 Solanum lycopersicum HOM05D001483 ORTHO05D001463 3.4e-12 77.4 103 40.8
Nitab4.5_0000060g0050 Nicotiana tabacum HOM05D001483 ORTHO05D001463 4.4e-12 77.0 108 38.0
ClCG11G013690 Citrullus lanatus HOM05D001483 ORTHO05D001463 9.8e-12 75.9 106 39.6
Carub.0002s1365 Capsella rubella HOM05D001483 ORTHO05D001463 1.3e-11 75.5 112 39.3
Dinv17561 Davidia involucrata HOM05D001483 ORTHO05D001463 1.3e-11 75.5 120 37.5
AL2G25910 Arabidopsis lyrata HOM05D001483 ORTHO05D001463 1.7e-11 75.1 112 38.4
CAN.G43.15 Capsicum annuum HOM05D001483 ORTHO05D001463 2.2e-11 74.7 104 40.4
Oeu058922.1 Olea europaea HOM05D001483 ORTHO05D001463 2.8e-11 74.3 112 38.4
Peaxi162Scf00128g01227 Petunia axillaris HOM05D001483 ORTHO05D001463 3.7e-11 73.9 114 38.6
Rhsim12G0025900 Rhododendron simsii HOM05D001483 ORTHO05D001463 6.3e-11 73.2 111 36.0
A07p32580 Brassica napus HOM05D001483 ORTHO05D001463 1.4e-10 72.0 112 39.3
BraA07t30882Z Brassica rapa HOM05D001483 ORTHO05D001463 1.4e-10 72.0 112 39.3
CiPaw.06G102500 Carya illinoinensis HOM05D001483 ORTHO05D001463 1.8e-10 71.6 106 39.6
Migut.E00019 Erythranthe guttata HOM05D001483 ORTHO05D001463 2.4e-10 71.2 105 39.0
MELO3C011868.2 Cucumis melo HOM05D001483 ORTHO05D001463 4.1e-10 70.5 108 36.1
CsaV3_5G030300 Cucumis sativus L. HOM05D001483 ORTHO05D001463 4.1e-10 70.5 108 36.1
Oeu036872.1 Olea europaea HOM05D001483 ORTHO05D001463 4.1e-10 70.5 102 40.2
BcaB03g15350 Brassica carinata HOM05D001483 ORTHO05D001463 7.0e-10 69.7 118 37.3
Lsat_1_v5_gn_8_147461 Lactuca sativa HOM05D001483 ORTHO05D233611 7.0e-10 69.7 305 27.2
Manes.12G011500 Manihot esculenta HOM05D001483 ORTHO05D001463 7.0e-10 69.7 104 36.5
Sed0023952 Sechium edule HOM05D001483 ORTHO05D001463 7.0e-10 69.7 107 36.4
Potri.003G173100 Populus trichocarpa HOM05D001483 ORTHO05D001463 9.2e-10 69.3 104 37.5
Sabra03G0126600 Salix brachista HOM05D001483 ORTHO05D001463 9.2e-10 69.3 104 35.6
THA.LOC104807878 Tarenaya hassleriana HOM05D001483 ORTHO05D001463 9.2e-10 69.3 111 35.1
AT1G67360 Arabidopsis thaliana HOM05D001483 ORTHO05D001463 1.2e-09 68.9 112 35.7
MSTRG.2459 Avicennia marina HOM05D001483 ORTHO05D001463 1.2e-09 68.9 112 36.6
Dinv10958 Davidia involucrata HOM05D001483 ORTHO05D001463 2.7e-09 67.8 120 35.8
MD16G1119000 Malus domestica HOM05D001483 ORTHO05D001463 2.7e-09 67.8 112 35.7
SalBow2G0646 Salvia bowleyana HOM05D001483 ORTHO05D001463 2.7e-09 67.8 107 33.6
SGA_v2.0_scaffold87G27155 Striga asiatica HOM05D001483 ORTHO05D001463 2.7e-09 67.8 108 37.0
A02p14190 Brassica napus HOM05D001483 ORTHO05D001463 3.5e-09 67.4 118 36.4
C06p38730 Brassica napus HOM05D001483 ORTHO05D001463 3.5e-09 67.4 125 36.0
CSS0048035 Camellia sinensis var. sinensis HOM05D001483 ORTHO05D001463 3.5e-09 67.4 110 34.5
MD13G1118800 Malus domestica HOM05D001483 ORTHO05D001463 3.5e-09 67.4 98 38.8
Sc04g0010120 Simmondsia chinensis HOM05D001483 ORTHO05D001463 4.5e-09 67.0 107 36.4
QL03p052770 Quercus lobata HOM05D001483 ORTHO05D001463 5.9e-09 66.6 98 36.7
Aa31LG7G9830 Aethionema arabicum HOM05D001483 ORTHO05D001463 1.0e-08 65.9 108 36.1
Atru.chr11.2322 Acer truncatum HOM05D001483 ORTHO05D001463 1.3e-08 65.5 101 36.6
BcaC03g14838 Brassica carinata HOM05D001483 ORTHO05D001463 1.3e-08 65.5 112 35.7
C02p22990 Brassica napus HOM05D001483 ORTHO05D001463 1.3e-08 65.5 112 35.7
BolC2t08443H Brassica oleracea HOM05D001483 ORTHO05D001463 1.3e-08 65.5 112 35.7
COL.COLO4_20399 Corchorus olitorius HOM05D001483 ORTHO05D001463 1.3e-08 65.5 97 37.1
Duzib268G0839 Durio zibethinus HOM05D001483 ORTHO05D001463 1.3e-08 65.5 100 37.0
Glyma.08G104200 Glycine max HOM05D001483 ORTHO05D001463 1.3e-08 65.5 108 34.3
Potri.001G055300 Populus trichocarpa HOM05D001483 ORTHO05D001463 1.3e-08 65.5 104 37.5
Sabra01G0039900 Salix brachista HOM05D001483 ORTHO05D001463 1.3e-08 65.5 104 38.5
BcaB05g24272 Brassica carinata HOM05D001483 ORTHO05D001463 1.7e-08 65.1 112 35.7
CARHR059900 Cardamine hirsuta HOM05D001483 ORTHO05D001463 1.7e-08 65.1 109 36.7
AUR62005619 Chenopodium quinoa HOM05D001483 ORTHO05D001463 1.7e-08 65.1 109 33.0
Sp5g22310 Schrenkiella parvula HOM05D001483 ORTHO05D001463 1.7e-08 65.1 106 38.7
BolC6t38962H Brassica oleracea HOM05D001483 ORTHO05D001463 2.3e-08 64.7 126 34.9
Thhalv10019076m.g Eutrema salsugineum HOM05D001483 ORTHO05D001463 2.3e-08 64.7 106 36.8
Glyma.18G006700 Glycine max HOM05D001483 ORTHO05D001463 2.3e-08 64.7 102 34.3
Medtr3g085370 Medicago truncatula HOM05D001483 ORTHO05D001463 2.3e-08 64.7 111 36.9
vmacro16107 Vaccinium macrocarpon HOM05D001483 ORTHO05D001463 2.3e-08 64.7 78 39.7
CiPaw.05G110000 Carya illinoinensis HOM05D001483 ORTHO05D001463 2.9e-08 64.3 87 40.2
Eucgr.H04640 Eucalyptus grandis HOM05D001483 ORTHO05D001463 2.9e-08 64.3 98 41.8
Ah.03g136160 Amaranthus hybridus HOM05D001483 ORTHO05D001463 3.8e-08 63.9 121 31.4
Medtr3g085395 Medicago truncatula HOM05D001132 ORTHO05D002510 3.8e-08 63.9 103 36.9
unitig_26.g10396 Utricularia gibba HOM05D001483 ORTHO05D001463 3.8e-08 63.9 107 36.4
unitig_8.g3137 Utricularia gibba HOM05D001483 ORTHO05D001463 3.8e-08 63.9 108 33.3
Ca_16460_v3 Cicer arietinum L. HOM05D001483 ORTHO05D001463 5.0e-08 63.5 115 34.8
Ciclev10032648m.g Citrus clementina HOM05D001483 ORTHO05D001463 5.0e-08 63.5 116 31.0
Haze_12417 Corylus avellana HOM05D001483 ORTHO05D001463 5.0e-08 63.5 80 38.8
FAN22G1802 Fragaria x ananassa HOM05D001483 ORTHO05D001463 5.0e-08 63.5 85 40.0
GSVIVG01010480001 Vitis vinifera HOM05D001483 ORTHO05D001463 5.0e-08 63.5 116 34.5
Cfa009368 Carpinus fangiana HOM05D001483 ORTHO05D001463 6.6e-08 63.2 80 37.5
Lj6A826T53 Lonicera japonica HOM05D001483 ORTHO05D001463 6.6e-08 63.2 110 32.7
MD08G1165600 Malus domestica HOM05D001483 ORTHO05D001463 6.6e-08 63.2 98 36.7
Psat5g096240 Pisum sativum HOM05D001483 ORTHO05D001463 6.6e-08 63.2 106 34.0
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 6.6e-08 63.2 113 34.5
MD01G1161800 Malus domestica HOM05D001483 ORTHO05D001463 8.6e-08 62.8 82 40.2
Manes.13G012400 Manihot esculenta HOM05D001483 ORTHO05D001463 8.6e-08 62.8 102 35.3
Sed0008682 Sechium edule HOM05D001483 ORTHO05D001463 8.6e-08 62.8 115 33.0
CANSAT01G2055 Cannabis sativa HOM05D001483 ORTHO05D001463 1.1e-07 62.4 107 36.4
FAN07G0712 Fragaria x ananassa HOM05D001483 ORTHO05D001463 1.1e-07 62.4 85 38.8
vmacro01332 Vaccinium macrocarpon HOM05D001483 ORTHO05D001463 1.1e-07 62.4 107 34.6
Glyma.05G147200 Glycine max HOM05D001483 ORTHO05D001463 1.5e-07 62.0 99 36.4
Prupe.1G226000 Prunus persica HOM05D001483 ORTHO05D001463 1.5e-07 62.0 107 35.5
Rhsim12G0099400 Rhododendron simsii HOM05D001483 ORTHO05D001463 1.5e-07 62.0 76 39.5
TPR.G17067 Trifolium pratense HOM05D001483 ORTHO05D001463 1.5e-07 62.0 105 33.3
arahy.Tifrunner.gnm1.ann1.12N6X7 Arachis hypogaea HOM05D001483 ORTHO05D001463 1.9e-07 61.6 98 35.7
arahy.Tifrunner.gnm1.ann1.6TI0EB Arachis hypogaea HOM05D001483 ORTHO05D001463 1.9e-07 61.6 98 35.7
EL10Ac6g13501 Beta vulgaris HOM05D001483 ORTHO05D001463 1.9e-07 61.6 109 32.1
Cpa.g.sc43.55 Carica papaya HOM05D001483 ORTHO05D001463 1.9e-07 61.6 110 33.6
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 1.9e-07 61.6 103 35.9
Cc11_g16880 Coffea canephora HOM05D001483 ORTHO05D001463 2.5e-07 61.2 88 42.0
FvH4_4g23790 Fragaria vesca HOM05D001483 ORTHO05D001463 3.3e-07 60.8 85 37.6
FAN12G1210 Fragaria x ananassa HOM05D001483 ORTHO05D001463 3.3e-07 60.8 85 37.6
RcHm_v2.0_Chr4g0430281 Rosa chinensis HOM05D001483 ORTHO05D001463 3.3e-07 60.8 106 35.8
Gorai.005G167200 Gossypium raimondii HOM05D001483 ORTHO05D001463 4.3e-07 60.5 109 33.0
Phvul.L001946 Phaseolus vulgaris HOM05D001483 ORTHO05D001463 4.3e-07 60.5 100 34.0
SGA_v2.0_scaffold391G50635 Striga asiatica HOM05D001483 ORTHO05D001463 4.3e-07 60.5 103 35.9
Lj3C1068T4 Lonicera japonica HOM05D001483 ORTHO05D001463 5.6e-07 60.1 116 33.6
arahy.Tifrunner.gnm1.ann1.BZTS91 Arachis hypogaea HOM05D001483 ORTHO05D001463 7.3e-07 59.7 104 31.7
arahy.Tifrunner.gnm1.ann1.SXJ33X Arachis hypogaea HOM05D001483 ORTHO05D001463 7.3e-07 59.7 104 31.7
Hund25464 Selenicereus undatus HOM05D001483 ORTHO05D001463 7.3e-07 59.7 102 31.4
Gohir.D02G149300 Gossypium hirsutum HOM05D001483 ORTHO05D001463 9.5e-07 59.3 106 32.1
Lj6C826T5 Lonicera japonica HOM05D001483 ORTHO05D001463 9.5e-07 59.3 117 35.0
MSTRG.8002 Avicennia marina HOM05D001483 ORTHO05D001463 1.2e-06 58.9 103 35.0
Glyma.11G250500 Glycine max HOM05D001483 ORTHO05D001463 1.2e-06 58.9 74 37.8
Gohir.D01G147700 Gossypium hirsutum HOM05D001483 ORTHO05D001463 1.2e-06 58.9 71 39.4
Gorai.002G183700 Gossypium raimondii HOM05D001483 ORTHO05D001463 1.2e-06 58.9 71 39.4
Lalb_Chr23g0278021 Lupinus albus HOM05D001483 ORTHO05D001463 1.2e-06 58.9 84 38.1
Gohir.A03G126300 Gossypium hirsutum HOM05D001483 ORTHO05D001463 1.6e-06 58.5 109 32.1
Lj6A826T52 Lonicera japonica HOM05D001483 ORTHO05D001463 1.6e-06 58.5 102 35.3
SalBow8G2469 Salvia bowleyana HOM05D001483 ORTHO05D001463 1.6e-06 58.5 86 39.5
Thecc.02G209100 Theobroma cacao HOM05D001483 ORTHO05D001463 1.6e-06 58.5 97 34.0
Lj4g0013589 Lotus japonicus HOM05D001483 ORTHO05D001463 2.1e-06 58.2 102 30.4
Lalb_Chr13g0294311 Lupinus albus HOM05D001483 ORTHO05D001463 2.1e-06 58.2 98 35.7
Lj6g0001795 Lotus japonicus HOM05D001483 ORTHO05D001463 2.8e-06 57.8 84 34.5
Medtr8g080570 Medicago truncatula HOM05D001483 ORTHO05D001463 2.8e-06 57.8 88 36.4
Phvul.001G261800 Phaseolus vulgaris HOM05D001483 ORTHO05D001463 2.8e-06 57.8 102 34.3
Thecc.01G297600 Theobroma cacao HOM05D001483 ORTHO05D001463 2.8e-06 57.8 78 41.0
CDE05G1419 Ceratophyllum demersum HOM05D001483 ORTHO05D001463 3.6e-06 57.4 143 28.7
AUR62024111 Chenopodium quinoa HOM05D001483 ORTHO05D001463 3.6e-06 57.4 105 34.3
VMungo0251G1711 Vigna mungo HOM05D001483 ORTHO05D001463 3.6e-06 57.4 105 33.3
Gohir.A04G139500 Gossypium hirsutum HOM05D001483 ORTHO05D001463 4.7e-06 57.0 100 35.0
Gohir.D12G135500 Gossypium hirsutum HOM05D001483 ORTHO05D001463 4.7e-06 57.0 80 40.0
Gorai.008G146700 Gossypium raimondii HOM05D001483 ORTHO05D001463 4.7e-06 57.0 80 40.0
PSO675G6283 Papaver somniferum HOM05D001483 ORTHO05D001463 4.7e-06 57.0 80 41.2
Actinidia20709 Actinidia chinensis HOM05D001483 ORTHO05D001463 8.0e-06 56.2 107 32.7
DCAR_018333 Daucus carota HOM05D001483 ORTHO05D001463 8.0e-06 56.2 75 41.3
Gohir.D04G182700 Gossypium hirsutum HOM05D001483 ORTHO05D001463 8.0e-06 56.2 100 34.0
TWI75G1813 Tripterygium wilfordii HOM05D001483 ORTHO05D001463 8.0e-06 56.2 108 31.5


User provided reference genes

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