Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2698 Erigeron canadensis HOM05D004865 ORTHO05D005949 4.6e-140 501.1 236 100.0
ECA233G0596 Erigeron canadensis HOM05D004865 ORTHO05D000001 2.3e-75 286.2 184 74.5
ECA233G5215 Erigeron canadensis HOM05D004865 ORTHO05D005949 4.7e-68 261.9 193 66.3
ECA233G5781 Erigeron canadensis HOM05D004865 ORTHO05D005949 6.1e-68 261.5 135 86.7
ECA233G6014 Erigeron canadensis HOM05D004865 ORTHO05D005949 7.0e-64 248.1 199 60.8
ECA233G1731 Erigeron canadensis HOM05D004865 ORTHO05D005949 2.5e-53 213.0 189 57.7
HanXRQChr03g0060851 Helianthus annuus HOM05D004865 ORTHO05D005949 5.7e-50 201.8 199 50.8
HanXRQChr03g0060861 Helianthus annuus HOM05D004865 ORTHO05D005949 1.7e-49 200.3 199 50.3
HanXRQChr17g0555801 Helianthus annuus HOM05D004865 ORTHO05D005949 5.5e-45 185.3 202 49.0
HanXRQChr17g0555831 Helianthus annuus HOM05D004865 ORTHO05D005949 1.4e-43 180.6 202 48.5
HanXRQChr14g0437021 Helianthus annuus HOM05D000041 ORTHO05D000452 1.5e-26 124.0 206 35.4
Lj3A898T31 Lonicera japonica HOM05D004865 ORTHO05D005949 7.5e-26 121.7 216 35.6
Gohir.D10G128100 Gossypium hirsutum HOM05D004865 ORTHO05D005949 1.3e-25 120.9 186 36.0
Gorai.011G141300 Gossypium raimondii HOM05D004865 ORTHO05D005949 1.3e-25 120.9 186 36.0
Lsat_1_v5_gn_8_2701 Lactuca sativa HOM05D000041 ORTHO05D000452 1.7e-25 120.6 207 34.8
Gohir.A10G138700 Gossypium hirsutum HOM05D004865 ORTHO05D005949 6.4e-25 118.6 186 35.5
ECA233G0690 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.9e-24 117.1 206 34.0
CsaV3_1G044030 Cucumis sativus L. HOM05D004865 ORTHO05D005949 9.2e-24 114.8 160 40.0
Duzib212G1045 Durio zibethinus HOM05D004865 ORTHO05D005949 1.2e-23 114.4 209 33.5
Sed0022242 Sechium edule HOM05D004865 ORTHO05D005949 2.0e-23 113.6 218 35.3
HanXRQChr14g0461501 Helianthus annuus HOM05D004865 ORTHO05D005949 4.6e-23 112.5 100 55.0
MD09G1162900 Malus domestica HOM05D004865 ORTHO05D005949 1.3e-22 110.9 212 35.8
ClCG11G000590 Citrullus lanatus HOM05D004865 ORTHO05D005949 5.0e-22 109.0 213 33.3
ClCG11G000680 Citrullus lanatus HOM05D004865 ORTHO05D005949 5.0e-22 109.0 216 34.7
MD09G1162600 Malus domestica HOM05D004865 ORTHO05D005949 1.5e-21 107.5 209 32.1
ClCG03G011140 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.9e-21 107.1 213 34.3
FvH4_6g36010 Fragaria vesca HOM05D004865 ORTHO05D005949 1.9e-21 107.1 217 33.6
FAN22G1472 Fragaria x ananassa HOM05D004865 ORTHO05D005949 1.9e-21 107.1 192 33.9
DCAR_016015 Daucus carota HOM05D004865 ORTHO05D005949 5.6e-21 105.5 185 35.1
MELO3C010083.2 Cucumis melo HOM05D004865 ORTHO05D005949 7.3e-21 105.1 160 38.1
HanXRQChr03g0085651 Helianthus annuus HOM05D004865 ORTHO05D005949 3.6e-20 102.8 209 35.4
MD09G1162700 Malus domestica HOM05D004865 ORTHO05D005949 4.7e-20 102.4 216 34.3
Ah.14g087230 Amaranthus hybridus HOM05D004865 ORTHO05D005949 6.2e-20 102.1 183 37.7
Actinidia30931 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.1e-19 101.3 212 34.0
DCAR_015954 Daucus carota HOM05D004865 ORTHO05D005949 1.4e-19 100.9 189 34.9
Actinidia30932 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.8e-19 100.5 212 33.0
HanXRQChr13g0416741 Helianthus annuus HOM05D004865 ORTHO05D005949 1.8e-19 100.5 206 34.5
AUR62031151 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.0e-19 99.4 183 34.4
ClCG03G011170 Citrullus lanatus HOM05D004865 ORTHO05D005949 4.0e-19 99.4 219 32.9
Hma1.2p1_1768F.1_g301530 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 4.0e-19 99.4 149 39.6
FAN02G0162 Fragaria x ananassa HOM05D004865 ORTHO05D005949 6.8e-19 98.6 192 32.3
MD17G1147700 Malus domestica HOM05D004865 ORTHO05D005949 2.6e-18 96.7 160 38.1
FAN09G4882 Fragaria x ananassa HOM05D004865 ORTHO05D005949 3.4e-18 96.3 244 29.5
MD09G1163100 Malus domestica HOM05D004865 ORTHO05D005949 4.4e-18 95.9 212 32.1
Prupe.2G116800 Prunus persica HOM05D004865 ORTHO05D005949 7.5e-18 95.1 216 30.6
AUR62036568 Chenopodium quinoa HOM05D004865 ORTHO05D005949 9.8e-18 94.7 183 32.8
Lsat_1_v5_gn_0_11001 Lactuca sativa HOM05D004865 ORTHO05D005949 2.9e-17 93.2 204 33.3
EL10Ac8g20499 Beta vulgaris HOM05D004865 ORTHO05D005949 1.4e-16 90.9 178 33.1
Ah.14g087250 Amaranthus hybridus HOM05D004865 ORTHO05D005949 2.4e-16 90.1 193 34.7
AUR62027396 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.4e-16 90.1 172 36.0
HanXRQChr13g0416771 Helianthus annuus HOM05D004865 ORTHO05D005949 2.4e-16 90.1 207 31.9
MD05G1102400 Malus domestica HOM05D004865 ORTHO05D005949 3.2e-16 89.7 216 33.3
HanXRQChr13g0416751 Helianthus annuus HOM05D004865 ORTHO05D005949 4.1e-16 89.4 207 31.9
Os04g0308500 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 7.1e-16 88.6 194 34.5
Os04g0310100 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 7.1e-16 88.6 194 34.5
Actinidia05767 Actinidia chinensis HOM05D004865 ORTHO05D005949 2.1e-15 87.0 171 35.7
Lj6P373T4 Lonicera japonica HOM05D004865 ORTHO05D005949 2.1e-15 87.0 127 37.8
SGA_v2.0_scaffold163G38046 Striga asiatica HOM05D004865 ORTHO05D005949 2.1e-15 87.0 212 31.1
MD17G1148100 Malus domestica HOM05D004865 ORTHO05D005949 2.7e-15 86.7 161 34.8
MD17G1148200 Malus domestica HOM05D004865 ORTHO05D005949 2.7e-15 86.7 161 34.8
Ah.06g181840 Amaranthus hybridus HOM05D004865 ORTHO05D005949 1.0e-14 84.7 228 30.7
Lj6P378T3 Lonicera japonica HOM05D004865 ORTHO05D005949 1.0e-14 84.7 127 36.2
Cre07.g321800 Chlamydomonas reinhardtii HOM05D004865 ORTHO05D005949 1.3e-14 84.3 206 33.0
Lj6P371T8 Lonicera japonica HOM05D004865 ORTHO05D005949 1.3e-14 84.3 127 36.2
Lj6P379T11 Lonicera japonica HOM05D004865 ORTHO05D005949 1.3e-14 84.3 127 36.2
FAN14G5541 Fragaria x ananassa HOM05D004865 ORTHO05D005949 2.3e-14 83.6 125 42.4
AUR62027395 Chenopodium quinoa HOM05D004865 ORTHO05D005949 8.6e-14 81.6 186 37.1
Lj1P314T6 Lonicera japonica HOM05D004865 ORTHO05D005949 2.5e-13 80.1 133 36.1
Sc06g0005920 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.3e-13 78.6 217 30.4
Sc22g0001740 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.3e-13 78.6 219 28.3
Lj1P501T11 Lonicera japonica HOM05D004865 ORTHO05D005949 1.2e-12 77.8 119 37.0
Lj1P506T13 Lonicera japonica HOM05D004865 ORTHO05D005949 1.2e-12 77.8 119 37.0
Sc22g0001760 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.2e-12 77.8 212 28.3
Ah.14g087270 Amaranthus hybridus HOM05D004865 ORTHO05D005949 2.1e-12 77.0 195 32.8
Prupe.1G577300 Prunus persica HOM05D004865 ORTHO05D005949 2.1e-12 77.0 111 40.5
Zm00001eb137370 Zea mays HOM05D004865 ORTHO05D005949 2.1e-12 77.0 186 29.6
MD17G1148000 Malus domestica HOM05D004865 ORTHO05D005949 2.8e-12 76.6 214 27.1
Zm00001eb137430 Zea mays HOM05D004865 ORTHO05D005949 2.8e-12 76.6 186 29.0
Ah.14g087240 Amaranthus hybridus HOM05D004865 ORTHO05D005949 4.7e-12 75.9 147 36.7
AUR62031152 Chenopodium quinoa HOM05D004865 ORTHO05D005949 8.1e-12 75.1 189 31.7
CsaV3_4G030090 Cucumis sativus L. HOM05D004865 ORTHO05D005949 8.1e-12 75.1 74 47.3
Lj6C375T0 Lonicera japonica HOM05D004865 ORTHO05D005949 8.1e-12 75.1 161 29.8
AUR62036569 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.1e-11 74.7 177 32.8
DCAR_015955 Daucus carota HOM05D004865 ORTHO05D005949 1.1e-11 74.7 170 30.6
FAN14G3467 Fragaria x ananassa HOM05D004865 ORTHO05D005949 1.1e-11 74.7 125 39.2
Hma1.2p1_0543F.1_g175180 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.4e-11 74.3 211 29.9
Hma1.2p1_3336F.1_g335335 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.4e-11 74.3 211 29.9
Sc09g0006350 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.8e-11 73.9 144 34.0
AUR62014652 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.3e-11 73.6 216 28.7
Lj1P308T9 Lonicera japonica HOM05D004865 ORTHO05D005949 3.1e-11 73.2 135 34.8
Lj1P506T10 Lonicera japonica HOM05D004865 ORTHO05D005949 4.0e-11 72.8 119 36.1
Lj1P515T6 Lonicera japonica HOM05D004865 ORTHO05D005949 4.0e-11 72.8 119 36.1
Sc22g0001730 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.0e-11 72.8 217 28.1
MELO3C031484.2 Cucumis melo HOM05D004865 ORTHO05D005949 5.2e-11 72.4 233 30.9
AUR62012544 Chenopodium quinoa HOM05D004865 ORTHO05D005949 8.9e-11 71.6 222 29.7
SGA_v2.0_scaffold11G05644 Striga asiatica HOM05D004865 ORTHO05D005949 8.9e-11 71.6 204 29.9
Duzib052G0039 Durio zibethinus HOM05D004865 ORTHO05D005949 1.2e-10 71.2 183 32.2
CSS0028314 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 1.5e-10 70.9 166 30.1
CSS0027528 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 2.0e-10 70.5 165 29.7
CSS0032746 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 2.0e-10 70.5 213 29.1
DCAR_016016 Daucus carota HOM05D004865 ORTHO05D005949 3.4e-10 69.7 135 34.8
EL10As6g23632 Beta vulgaris HOM05D004865 ORTHO05D005949 2.9e-09 66.6 223 26.9
Sc23g0005380 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.9e-09 66.6 194 26.8
EL10As6g23631 Beta vulgaris HOM05D004865 ORTHO05D005949 3.7e-09 66.2 223 26.5
Sc09g0006330 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.7e-09 66.2 144 30.6
AUR62044724 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.9e-09 65.9 112 37.5
Sc09g0006340 Simmondsia chinensis HOM05D004865 ORTHO05D005949 8.4e-09 65.1 210 28.6
Sc17g0004370 Simmondsia chinensis HOM05D004865 ORTHO05D005949 8.4e-09 65.1 161 29.2
Sc24g0002440 Simmondsia chinensis HOM05D004865 ORTHO05D005949 8.4e-09 65.1 157 31.2
AUR62014649 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.4e-08 64.3 91 37.4
Sc22g0001710 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.4e-08 64.3 216 27.3
Sc16g0002940 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.9e-08 63.9 111 36.0
Zm00001eb137380 Zea mays HOM05D004865 ORTHO05D005949 4.1e-08 62.8 104 34.6
Sc09g0006530 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.2e-07 61.2 150 32.0
Zm00001eb137410 Zea mays HOM05D004865 ORTHO05D005949 1.2e-07 61.2 104 33.7
CSS0005385 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 2.1e-07 60.5 122 32.8
AUR62012571 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.1e-07 60.5 173 28.9
EL10Ac8g20500 Beta vulgaris HOM05D004865 ORTHO05D005949 2.7e-07 60.1 111 33.3
Sc16g0002960 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.5e-07 59.7 119 31.1
Sc22g0001720 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.3e-06 57.8 160 30.6
ClCG11G011710 Citrullus lanatus HOM05D004865 ORTHO05D034719 3.0e-06 56.6 147 30.6
SGA_v2.0_scaffold11G05649 Striga asiatica HOM05D004865 ORTHO05D005949 3.9e-06 56.2 143 28.7
CSS0013136 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 8.6e-06 55.1 96 34.4


User provided reference genes

Program Settings