Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2547 Erigeron canadensis HOM05D007500 ORTHO05D009197 3.1e-51 204.9 107 100.0
Lsat_1_v5_gn_8_131281 Lactuca sativa HOM05D007500 ORTHO05D009197 1.1e-35 153.3 111 72.1
HanXRQChr09g0258281 Helianthus annuus HOM05D007500 ORTHO05D009197 6.0e-31 137.5 108 71.3
BcaC06g31713 Brassica carinata HOM05D007500 ORTHO05D009197 1.7e-30 136.0 104 67.3
BcaC06g31714 Brassica carinata HOM05D007500 ORTHO05D009197 1.7e-30 136.0 104 67.3
CSS0001813 Camellia sinensis var. sinensis HOM05D007500 ORTHO05D009197 3.3e-29 131.7 104 66.3
CANSAT01G0539 Cannabis sativa HOM05D007500 ORTHO05D009197 9.6e-29 130.2 108 64.8
Dinv14836 Davidia involucrata HOM05D007500 ORTHO05D009197 1.3e-28 129.8 105 61.9
Migut.K00728 Erythranthe guttata HOM05D007500 ORTHO05D009197 1.3e-28 129.8 108 58.3
A06p47960 Brassica napus HOM05D007500 ORTHO05D009197 2.1e-28 129.0 104 63.5
BraA06t27666Z Brassica rapa HOM05D007500 ORTHO05D009197 2.1e-28 129.0 104 63.5
SalBow2G0500 Salvia bowleyana HOM05D007500 ORTHO05D009197 2.1e-28 129.0 106 61.3
BcaC06g34668 Brassica carinata HOM05D007500 ORTHO05D009197 3.6e-28 128.3 104 63.5
BolC7t43101H Brassica oleracea HOM05D007500 ORTHO05D009197 3.6e-28 128.3 104 63.5
Thhalv10003290m.g Eutrema salsugineum HOM05D007500 ORTHO05D009197 3.6e-28 128.3 104 64.4
Sp2g08040 Schrenkiella parvula HOM05D007500 ORTHO05D009197 3.6e-28 128.3 104 63.5
COL.COLO4_20391 Corchorus olitorius HOM05D007500 ORTHO05D009197 4.8e-28 127.9 109 60.6
MSTRG.7998 Avicennia marina HOM05D007500 ORTHO05D009197 6.2e-28 127.5 106 58.5
C07p25790 Brassica napus HOM05D007500 ORTHO05D009197 8.1e-28 127.1 104 63.5
Sabra01G0039500 Salix brachista HOM05D007500 ORTHO05D009197 8.1e-28 127.1 110 61.8
Atru.chr11.2314 Acer truncatum HOM05D007500 ORTHO05D009197 1.1e-27 126.7 108 61.1
arahy.Tifrunner.gnm1.ann1.Z93F9T Arachis hypogaea HOM05D007500 ORTHO05D009197 1.1e-27 126.7 106 59.4
Peaxi162Scf00128g00124 Petunia axillaris HOM05D007500 ORTHO05D009197 1.1e-27 126.7 107 62.6
Haze_12411 Corylus avellana HOM05D007500 ORTHO05D009197 1.8e-27 125.9 107 62.6
Cc11_g16840 Coffea canephora HOM05D007500 ORTHO05D009197 3.1e-27 125.2 105 60.0
Potri.001G055000 Populus trichocarpa HOM05D007500 ORTHO05D009197 3.1e-27 125.2 110 60.9
Solyc05g015330.1 Solanum lycopersicum HOM05D007500 ORTHO05D009197 3.1e-27 125.2 106 61.3
Duzib268G0307 Durio zibethinus HOM05D007500 ORTHO05D009197 4.0e-27 124.8 109 60.6
Thecc.02G209700 Theobroma cacao HOM05D007500 ORTHO05D009197 4.0e-27 124.8 108 62.0
AT5G43250 Arabidopsis thaliana HOM05D007500 ORTHO05D009197 6.9e-27 124.0 104 63.5
Sopen05g010600 Solanum pennellii HOM05D007500 ORTHO05D009197 9.0e-27 123.6 106 59.4
PGSC0003DMG400029106 Solanum tuberosum HOM05D007500 ORTHO05D009197 9.0e-27 123.6 106 61.3
Gohir.A03G126600 Gossypium hirsutum HOM05D007500 ORTHO05D009197 1.2e-26 123.2 109 60.6
Sed0012176 Sechium edule HOM05D007500 ORTHO05D009197 1.2e-26 123.2 106 57.5
AL8G17240 Arabidopsis lyrata HOM05D007500 ORTHO05D009197 2.6e-26 122.1 104 62.5
Cfa009364 Carpinus fangiana HOM05D007500 ORTHO05D009197 2.6e-26 122.1 107 61.7
Nitab4.5_0001404g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 2.6e-26 122.1 107 60.7
QL03p052860 Quercus lobata HOM05D007500 ORTHO05D009197 3.4e-26 121.7 107 59.8
QL03p053117 Quercus lobata HOM05D007500 ORTHO05D009197 3.4e-26 121.7 107 59.8
QL93p2010_0098 Quercus lobata HOM05D007500 ORTHO05D009197 3.4e-26 121.7 107 59.8
Aa31LG9G13320 Aethionema arabicum HOM05D007500 ORTHO05D009197 4.5e-26 121.3 107 61.7
CARHR180640 Cardamine hirsuta HOM05D007500 ORTHO05D009197 4.5e-26 121.3 106 62.3
Gohir.D02G150000 Gossypium hirsutum HOM05D007500 ORTHO05D009197 4.5e-26 121.3 109 56.9
Gorai.005G168300 Gossypium raimondii HOM05D007500 ORTHO05D009197 4.5e-26 121.3 109 56.9
Manes.12G012100 Manihot esculenta HOM05D007500 ORTHO05D009197 5.8e-26 120.9 110 60.0
Aqoxy6G00433 Aquilegia oxysepala HOM05D007500 ORTHO05D009197 7.6e-26 120.6 106 60.4
CiPaw.05G110500 Carya illinoinensis HOM05D007500 ORTHO05D009197 9.9e-26 120.2 110 59.1
MELO3C011458.2 Cucumis melo HOM05D007500 ORTHO05D009197 1.7e-25 119.4 107 59.8
THA.LOC104814194 Tarenaya hassleriana HOM05D007500 ORTHO05D009197 1.7e-25 119.4 109 58.7
AUR62024115 Chenopodium quinoa HOM05D007500 ORTHO05D009197 2.2e-25 119.0 105 64.8
CsaV3_6G032240 Cucumis sativus L. HOM05D007500 ORTHO05D009197 2.2e-25 119.0 107 58.9
Sc14g0009050 Simmondsia chinensis HOM05D007500 ORTHO05D009197 2.2e-25 119.0 110 58.2
CAN.G43.17 Capsicum annuum HOM05D007500 ORTHO05D009197 2.9e-25 118.6 105 58.1
Nitab4.5_0000861g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 2.9e-25 118.6 107 59.8
PSO541G0382 Papaver somniferum HOM05D007500 ORTHO05D009197 3.8e-25 118.2 106 58.5
unitig_26.g10395 Utricularia gibba HOM05D007500 ORTHO05D009197 3.8e-25 118.2 107 58.9
Carub.0008s0545 Capsella rubella HOM05D007500 ORTHO05D009197 4.9e-25 117.9 104 56.7
Nn5g28851 Nelumbo nucifera HOM05D007500 ORTHO05D009197 4.9e-25 117.9 106 59.4
Cpa.g.sc43.48 Carica papaya HOM05D007500 ORTHO05D009197 8.4e-25 117.1 110 57.3
TWI18G0612 Tripterygium wilfordii HOM05D007500 ORTHO05D009197 1.1e-24 116.7 106 58.5
ClCG08G010070 Citrullus lanatus HOM05D007500 ORTHO05D009197 1.4e-24 116.3 107 57.9
PGR102G0196 Punica granatum HOM05D007500 ORTHO05D009197 1.4e-24 116.3 110 60.0
SGA_v2.0_scaffold9G04716 Striga asiatica HOM05D007500 ORTHO05D009197 3.2e-24 115.2 111 54.1
Actinidia30653 Actinidia chinensis HOM05D007500 ORTHO05D009197 4.2e-24 114.8 90 65.6
Ciclev10033679m.g Citrus clementina HOM05D007500 ORTHO05D009197 4.2e-24 114.8 110 59.1
Ca_16464_v3 Cicer arietinum L. HOM05D007500 ORTHO05D009197 5.4e-24 114.4 104 57.7
PSO675G4883 Papaver somniferum HOM05D007500 ORTHO05D009197 7.1e-24 114.0 104 57.7
TAR381G0854 Trochodendron aralioides HOM05D007500 ORTHO05D009197 7.1e-24 114.0 106 56.6
VMungo1383G3421 Vigna mungo HOM05D007500 ORTHO05D009197 7.1e-24 114.0 107 58.9
Glyma.11G250000 Glycine max HOM05D007500 ORTHO05D009197 1.6e-23 112.8 107 57.9
Phvul.001G261300 Phaseolus vulgaris HOM05D007500 ORTHO05D009197 2.1e-23 112.5 105 55.2
EL10Ac6g13495 Beta vulgaris HOM05D007500 ORTHO05D009197 3.5e-23 111.7 106 60.4
Psat5g095440 Pisum sativum HOM05D007500 ORTHO05D009197 3.5e-23 111.7 102 55.9
Glyma.18G007100 Glycine max HOM05D007500 ORTHO05D009197 4.6e-23 111.3 107 57.0
Lj6g0001546 Lotus japonicus HOM05D007500 ORTHO05D009197 4.6e-23 111.3 106 53.8
MBI01_g29007_MAGBIO Magnolia biondii HOM05D007500 ORTHO05D009197 1.0e-22 110.2 107 55.1
Medtr3g085430 Medicago truncatula HOM05D007500 ORTHO05D009197 2.3e-22 109.0 108 53.7
MD16G1118400 Malus domestica HOM05D007500 ORTHO05D009197 6.7e-22 107.5 122 50.0
MD13G1118300 Malus domestica HOM05D007500 ORTHO05D009197 8.7e-22 107.1 122 49.2
DCAR_031200 Daucus carota HOM05D007500 ORTHO05D009197 1.1e-21 106.7 107 57.0
Ah.03g136190 Amaranthus hybridus HOM05D007500 ORTHO05D009197 1.9e-21 105.9 106 53.8
AUR62005615 Chenopodium quinoa HOM05D007500 ORTHO05D009197 3.3e-21 105.1 99 60.6
FAN17G2194 Fragaria x ananassa HOM05D007500 ORTHO05D009197 3.3e-21 105.1 107 55.1
RcHm_v2.0_Chr4g0430411 Rosa chinensis HOM05D007500 ORTHO05D009197 3.3e-21 105.1 107 55.1
FAN22G1415 Fragaria x ananassa HOM05D007500 ORTHO05D009197 4.3e-21 104.8 107 55.1
Prupe.1G226700 Prunus persica HOM05D007500 ORTHO05D009197 9.6e-21 103.6 122 48.4
FAN12G0274 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.3e-20 103.2 110 51.8
FAN07G2442 Fragaria x ananassa HOM05D007500 ORTHO05D009197 2.1e-20 102.4 110 53.6
Rhsim12G0026300 Rhododendron simsii HOM05D007500 ORTHO05D009197 2.1e-20 102.4 98 58.2
FvH4_4g23840 Fragaria vesca HOM05D007500 ORTHO05D009197 3.7e-20 101.7 110 50.9
Lalb_Chr08g0230661 Lupinus albus HOM05D007500 ORTHO05D009197 6.2e-20 100.9 104 50.0
ATR1120G099 Amborella trichopoda HOM05D007500 ORTHO05D009197 5.3e-19 97.8 104 51.9
TPR.G28279 Trifolium pratense HOM05D007500 ORTHO05D009197 1.5e-18 96.3 76 61.8
CDE06G2379 Ceratophyllum demersum HOM05D007500 ORTHO05D009197 9.9e-18 93.6 108 48.1
HPP92_002864 Vanilla planifolia HOM05D007500 ORTHO05D009197 4.6e-15 84.7 72 56.9
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 1.1e-11 73.6 55 70.9
Os01g0183400 Oryza sativa ssp. japonica HOM05D007500 ORTHO05D009197 1.1e-11 73.6 111 35.1
Zm00001eb122050 Zea mays HOM05D007500 ORTHO05D009197 5.3e-11 71.2 111 35.1
SEGI_35529 Sequoiadendron giganteum HOM05D007500 ORTHO05D009197 4.2e-08 61.6 68 47.1


User provided reference genes

Program Settings