Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2541 Erigeron canadensis HOM05D004897 ORTHO05D005928 0.0e+00 1260.7 711 100.0
HanXRQChr08g0227441 Helianthus annuus HOM05D004897 ORTHO05D005928 8.9e-155 551.6 665 60.0
Lsat_1_v5_gn_8_144040 Lactuca sativa HOM05D004897 ORTHO05D005928 1.2e-154 551.2 675 57.5
Lj9C421G3 Lonicera japonica HOM05D004897 ORTHO05D005928 1.5e-130 471.1 668 50.4
CSS0030961 Camellia sinensis var. sinensis HOM05D004897 ORTHO05D005928 2.6e-130 470.3 710 51.5
Actinidia18901 Actinidia chinensis HOM05D004897 ORTHO05D005928 4.7e-124 449.5 701 48.8
Duzib084G0246 Durio zibethinus HOM05D004897 ORTHO05D005928 2.4e-123 447.2 697 49.4
Migut.D01558 Erythranthe guttata HOM05D004897 ORTHO05D005928 2.4e-123 447.2 677 47.9
TAR622G0961 Trochodendron aralioides HOM05D004897 ORTHO05D005928 1.9e-120 437.6 725 47.0
DCAR_014009 Daucus carota HOM05D004897 ORTHO05D005928 3.2e-120 436.8 696 48.7
Hma1.2p1_0669F.1_g200180 Hydrangea macrophylla HOM05D004897 ORTHO05D005928 3.2e-120 436.8 723 44.5
Oeu014377.2 Olea europaea HOM05D004897 ORTHO05D005928 5.4e-120 436.0 678 48.7
Prupe.5G232100 Prunus persica HOM05D004897 ORTHO05D005928 2.1e-119 434.1 699 47.6
Cfa019677 Carpinus fangiana HOM05D004897 ORTHO05D005928 2.7e-119 433.7 703 48.1
Gohir.A12G268700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 1.0e-118 431.8 721 45.2
Actinidia35124 Actinidia chinensis HOM05D004897 ORTHO05D005928 1.7e-118 431.0 715 47.6
PGSC0003DMG400005743 Solanum tuberosum HOM05D004897 ORTHO05D005928 2.3e-118 430.6 708 45.3
Thecc.03G053700 Theobroma cacao HOM05D004897 ORTHO05D005928 3.0e-118 430.3 709 48.2
MD06G1230800 Malus domestica HOM05D004897 ORTHO05D005928 3.9e-118 429.9 691 46.3
CiPaw.15G140900 Carya illinoinensis HOM05D004897 ORTHO05D005928 5.1e-118 429.5 698 47.4
Glyma.05G244800 Glycine max HOM05D004897 ORTHO05D005928 5.1e-118 429.5 705 46.4
QL10p028216 Quercus lobata HOM05D004897 ORTHO05D005928 5.6e-117 426.0 693 47.5
Nn4g24194 Nelumbo nucifera HOM05D004897 ORTHO05D005928 9.6e-117 425.2 725 46.1
QL10p028331 Quercus lobata HOM05D004897 ORTHO05D005928 9.6e-117 425.2 693 47.8
MD14G1235400 Malus domestica HOM05D004897 ORTHO05D005928 1.3e-116 424.9 687 47.0
Gohir.D12G269100 Gossypium hirsutum HOM05D004897 ORTHO05D005928 1.6e-116 424.5 721 47.2
Cc04_g06380 Coffea canephora HOM05D004897 ORTHO05D005928 3.6e-116 423.3 699 47.4
Gorai.008G289400 Gossypium raimondii HOM05D004897 ORTHO05D005928 6.2e-116 422.5 716 47.2
MBI12_g30398_MAGBIO Magnolia biondii HOM05D004897 ORTHO05D005928 6.2e-116 422.5 698 44.0
Lalb_Chr05g0221751 Lupinus albus HOM05D004897 ORTHO05D005928 1.1e-115 421.8 678 48.2
CAN.G1129.49 Capsicum annuum HOM05D004897 ORTHO05D005928 5.3e-115 419.5 703 48.8
FAN13G1819 Fragaria x ananassa HOM05D004897 ORTHO05D005928 6.9e-115 419.1 694 44.8
Gohir.A09G175700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 9.0e-115 418.7 706 44.9
Ciclev10007731m.g Citrus clementina HOM05D004897 ORTHO05D005928 1.2e-114 418.3 647 49.1
Medtr8g107060 Medicago truncatula HOM05D004897 ORTHO05D005928 1.2e-114 418.3 692 46.8
Hund02326 Selenicereus undatus HOM05D004897 ORTHO05D005928 2.0e-114 417.5 704 46.6
Manes.14G170400 Manihot esculenta HOM05D004897 ORTHO05D005928 2.6e-114 417.2 708 46.3
RcHm_v2.0_Chr7g0178571 Rosa chinensis HOM05D004897 ORTHO05D005928 2.6e-114 417.2 694 44.7
FAN18G0124 Fragaria x ananassa HOM05D004897 ORTHO05D005928 4.4e-114 416.4 696 47.3
Aqoxy3G00106 Aquilegia oxysepala HOM05D004897 ORTHO05D005928 5.8e-114 416.0 683 48.3
Eucgr.B00942 Eucalyptus grandis HOM05D004897 ORTHO05D005928 1.3e-113 414.8 697 45.5
Nitab4.5_0006894g0040 Nicotiana tabacum HOM05D004897 ORTHO05D005928 2.9e-113 413.7 743 45.8
Phvul.002G329100 Phaseolus vulgaris HOM05D004897 ORTHO05D005928 2.9e-113 413.7 710 45.4
Glyma.08G053300 Glycine max HOM05D004897 ORTHO05D005928 6.4e-113 412.5 703 44.8
MSTRG.4571 Avicennia marina HOM05D004897 ORTHO05D005928 3.2e-112 410.2 703 45.0
FAN04G2242 Fragaria x ananassa HOM05D004897 ORTHO05D005928 4.2e-112 409.8 703 46.5
VMungo0251G1788 Vigna mungo HOM05D004897 ORTHO05D005928 4.2e-112 409.8 708 46.5
Potri.015G039800 Populus trichocarpa HOM05D004897 ORTHO05D005928 5.4e-112 409.5 697 46.5
Haze_18817 Corylus avellana HOM05D004897 ORTHO05D005928 9.3e-112 408.7 772 44.6
TWI81G0456 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 9.3e-112 408.7 711 45.3
FAN08G3076 Fragaria x ananassa HOM05D004897 ORTHO05D005928 1.6e-111 407.9 698 46.4
SalBow1G4576 Salvia bowleyana HOM05D004897 ORTHO05D005928 1.6e-111 407.9 687 45.9
Nitab4.5_0001456g0120 Nicotiana tabacum HOM05D004897 ORTHO05D005928 6.0e-111 406.0 735 42.0
SGA_v2.0_scaffold168G38498 Striga asiatica HOM05D004897 ORTHO05D005928 1.7e-110 404.4 693 46.3
Rhsim12G0138900 Rhododendron simsii HOM05D004897 ORTHO05D005928 3.9e-110 403.3 679 47.0
Lalb_Chr16g0387081 Lupinus albus HOM05D004897 ORTHO05D005928 6.6e-110 402.5 696 45.8
AUR62042935 Chenopodium quinoa HOM05D004897 ORTHO05D005928 8.7e-110 402.1 635 45.7
TWI60G0918 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 1.9e-109 401.0 711 45.7
COL.COLO4_16135 Corchorus olitorius HOM05D004897 ORTHO05D005928 2.5e-109 400.6 705 45.4
Psat7g002120 Pisum sativum HOM05D004897 ORTHO05D005928 2.8e-108 397.1 700 45.6
Sabra15G0057300 Salix brachista HOM05D004897 ORTHO05D005928 3.6e-108 396.7 693 46.2
Dinv18253 Davidia involucrata HOM05D004897 ORTHO05D005928 9.0e-107 392.1 381 60.9
BcaB07g31825 Brassica carinata HOM05D004897 ORTHO05D005928 1.2e-106 391.7 662 46.7
CDE05G2998 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 1.5e-106 391.3 684 45.2
ClCG06G014390 Citrullus lanatus HOM05D004897 ORTHO05D005928 2.0e-106 391.0 706 43.9
Thhalv10007004m.g Eutrema salsugineum HOM05D004897 ORTHO05D005928 9.9e-106 388.7 672 46.1
Lj4g0010445 Lotus japonicus HOM05D004897 ORTHO05D005928 9.9e-106 388.7 675 46.4
A06p14220 Brassica napus HOM05D004897 ORTHO05D005928 3.8e-105 386.7 658 45.4
Carub.0001s1783 Capsella rubella HOM05D004897 ORTHO05D005928 6.4e-105 386.0 675 45.2
arahy.Tifrunner.gnm1.ann1.Y8NJDB Arachis hypogaea HOM05D004897 ORTHO05D005928 1.9e-104 384.4 725 45.2
PSO017G1741 Papaver somniferum HOM05D004897 ORTHO05D005928 1.9e-104 384.4 676 47.3
BraA06t24553Z Brassica rapa HOM05D004897 ORTHO05D005928 3.2e-104 383.6 658 45.6
CsaV3_1G004270 Cucumis sativus L. HOM05D004897 ORTHO05D005928 5.5e-104 382.9 692 44.4
THA.LOC104812165 Tarenaya hassleriana HOM05D004897 ORTHO05D005928 7.1e-104 382.5 692 42.3
BolC5t30347H Brassica oleracea HOM05D004897 ORTHO05D005928 9.3e-104 382.1 664 44.6
Sp1g16170 Schrenkiella parvula HOM05D004897 ORTHO05D005928 1.2e-103 381.7 675 45.8
PSO478G0546 Papaver somniferum HOM05D004897 ORTHO05D005928 3.5e-103 380.2 674 47.2
AL1G30560 Arabidopsis lyrata HOM05D004897 ORTHO05D005928 6.0e-103 379.4 675 44.9
AT1G18190 Arabidopsis thaliana HOM05D004897 ORTHO05D005928 7.9e-103 379.0 676 44.8
C05p16500 Brassica napus HOM05D004897 ORTHO05D005928 1.3e-102 378.3 661 44.8
Ca_17200_v3 Cicer arietinum L. HOM05D004897 ORTHO05D005928 3.0e-102 377.1 706 45.0
arahy.Tifrunner.gnm1.ann1.QTT902 Arachis hypogaea HOM05D004897 ORTHO05D005928 5.1e-102 376.3 724 43.9
A08p30510 Brassica napus HOM05D004897 ORTHO05D005928 1.3e-100 371.7 653 45.5
Atru.chr9.1748 Acer truncatum HOM05D004897 ORTHO05D005928 1.6e-100 371.3 671 45.6
vmacro16414 Vaccinium macrocarpon HOM05D004897 ORTHO05D005928 3.8e-97 360.1 853 38.7
Aa31LG7G2880 Aethionema arabicum HOM05D004897 ORTHO05D005928 1.1e-96 358.6 702 43.2
PGR083G0946 Punica granatum HOM05D004897 ORTHO05D005928 5.5e-96 356.3 703 40.4
Sc10g0009320 Simmondsia chinensis HOM05D004897 ORTHO05D005928 1.8e-94 351.3 682 41.8
BcaC05g25714 Brassica carinata HOM05D004897 ORTHO05D005928 8.7e-94 349.0 347 58.2
Ah.11g045250 Amaranthus hybridus HOM05D004897 ORTHO05D005928 2.5e-93 347.4 675 43.0
Sed0018128 Sechium edule HOM05D004897 ORTHO05D005928 2.5e-93 347.4 350 58.0
MELO3C017351.2 Cucumis melo HOM05D004897 ORTHO05D005928 1.3e-92 345.1 714 41.3
Peaxi162Scf00683g00441 Petunia axillaris HOM05D004897 ORTHO05D005928 1.6e-92 344.7 295 66.8
Sed0002019 Sechium edule HOM05D004897 ORTHO05D005928 6.3e-92 342.8 701 41.2
TPR.G1406 Trifolium pratense HOM05D004897 ORTHO05D005928 2.6e-90 337.4 678 44.0
Dinv10174 Davidia involucrata HOM05D004897 ORTHO05D005928 1.0e-89 335.5 582 48.5
HPP92_013368 Vanilla planifolia HOM05D004897 ORTHO05D005928 9.3e-88 328.9 648 42.3
BcaC07g38902 Brassica carinata HOM05D004897 ORTHO05D005928 1.2e-87 328.6 633 40.4
BraA08t34983Z Brassica rapa HOM05D004897 ORTHO05D005928 5.3e-83 313.2 328 57.0
C08p18450 Brassica napus HOM05D004897 ORTHO05D005928 4.5e-82 310.1 330 55.8
FvH4_5g17221 Fragaria vesca HOM05D004897 ORTHO05D005928 2.0e-74 284.6 575 43.8
Os04g0652500 Oryza sativa ssp. japonica HOM05D004897 ORTHO05D005928 6.5e-73 279.6 308 51.6
Cpa.g.sc3.408 Carica papaya HOM05D004897 ORTHO05D005928 5.5e-72 276.6 587 40.9
Zm00001eb068130 Zea mays HOM05D004897 ORTHO05D005928 1.9e-64 251.5 589 37.7
BcaNung05436 Brassica carinata HOM05D004897 ORTHO05D005928 2.1e-63 248.1 300 51.3
CARHR018760 Cardamine hirsuta HOM05D004897 ORTHO05D005928 3.8e-57 227.3 246 55.3
GSVIVG01008417001 Vitis vinifera HOM05D004897 ORTHO05D005928 1.9e-56 224.9 206 62.6
BolC8t49476H Brassica oleracea HOM05D004897 ORTHO05D005928 4.2e-56 223.8 293 48.5
GSVIVG01008418001 Vitis vinifera HOM05D004897 ORTHO05D005928 2.2e-49 201.4 468 39.1
Gohir.D09G170550 Gossypium hirsutum HOM05D004897 ORTHO05D005928 8.0e-47 193.0 167 63.5
Gorai.006G192100 Gossypium raimondii HOM05D004897 ORTHO05D005928 2.3e-46 191.4 167 62.9
BcaB03g12969 Brassica carinata HOM05D004897 ORTHO05D005928 4.4e-45 187.2 279 46.6
ATR1102G018 Amborella trichopoda HOM05D004897 ORTHO05D005928 1.4e-43 182.2 218 50.0
Mapoly0056s0112 Marchantia polymorpha HOM05D004897 ORTHO05D005928 5.9e-42 176.8 365 35.1
Pp3c2_5550 Physcomitrium patens HOM05D004897 ORTHO05D005928 1.9e-40 171.8 346 39.0
AagrBONN_evm.TU.Sc2ySwM_344.4779 Anthoceros agrestis HOM05D004897 ORTHO05D005928 2.5e-40 171.4 347 37.2
ATR1102G065 Amborella trichopoda HOM05D004897 ORTHO05D005928 6.8e-38 163.3 519 34.9
CARHR018770 Cardamine hirsuta HOM05D004897 ORTHO05D005928 1.4e-35 155.6 429 39.4
ECA236G2271 Erigeron canadensis HOM05D003069 ORTHO05D016972 3.2e-35 154.5 98 91.8
unitig_0.g806 Utricularia gibba HOM05D004897 ORTHO05D005928 1.7e-33 148.7 195 48.7
SEGI_33031 Sequoiadendron giganteum HOM05D004897 ORTHO05D005928 2.1e-31 141.7 217 40.6
ECA232G2178 Erigeron canadensis HOM05D003069 ORTHO05D016972 1.8e-30 138.7 80 98.8
ECA232G4467 Erigeron canadensis HOM05D003069 ORTHO05D016972 3.4e-29 134.4 80 96.2
ECA210G0001 Erigeron canadensis HOM05D003069 ORTHO05D016972 2.9e-28 131.3 80 96.2
Oeu041181.1 Olea europaea HOM05D004897 ORTHO05D005928 4.1e-27 127.5 299 37.5
Zm00001eb072950 Zea mays HOM05D004897 ORTHO05D005928 7.0e-27 126.7 145 51.7
AUR62041008 Chenopodium quinoa HOM05D004897 ORTHO05D005928 4.6e-26 124.0 374 40.1
Oeu041185.1 Olea europaea HOM05D004897 ORTHO05D005928 1.2e-23 115.9 369 36.9
ECA238G2610 Erigeron canadensis HOM05D002906 ORTHO05D003211 1.4e-22 112.5 110 69.1
CDE05G0958 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 5.2e-22 110.5 92 65.2
Zm00001eb168530 Zea mays HOM05D004897 ORTHO05D005928 3.4e-21 107.8 127 47.2
Zm00001eb243110 Zea mays HOM05D004897 ORTHO05D005928 3.4e-21 107.8 127 47.2
Zm00001eb381910 Zea mays HOM05D004897 ORTHO05D005928 3.4e-21 107.8 127 47.2
Zm00001eb382530 Zea mays HOM05D004897 ORTHO05D005928 3.4e-21 107.8 127 47.2
Actinidia04720 Actinidia chinensis HOM05D004897 ORTHO05D005928 2.1e-18 98.6 370 38.6
Zm00001eb280830 Zea mays HOM05D004897 ORTHO05D005928 2.3e-17 95.1 119 44.5
SMO269G0021 Selaginella moellendorffii HOM05D004897 ORTHO05D005928 3.3e-16 91.3 512 27.1
Zm00001eb382330 Zea mays HOM05D004897 ORTHO05D005928 3.3e-16 91.3 82 57.3
ECA234G4312 Erigeron canadensis HOM05D000006 ORTHO05D002361 7.6e-13 80.1 53 90.6
Aqoxy7G03881 Aquilegia oxysepala HOM05D004485 ORTHO05D005485 1.4e-11 75.9 340 24.7
TWI36G1671 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 3.5e-10 71.2 55 69.1
HPP92_005563 Vanilla planifolia HOM05D004485 ORTHO05D005485 1.0e-09 69.7 317 24.9
Peaxi162Scf00683g00456 Petunia axillaris HOM05D004897 ORTHO05D005928 1.3e-09 69.3 131 42.7
PGSC0003DMG403005669 Solanum tuberosum HOM05D004897 ORTHO05D005928 2.3e-09 68.6 57 61.4
C09p15010 Brassica napus HOM05D004485 ORTHO05D005485 8.6e-09 66.6 367 23.7
ECA232G1307 Erigeron canadensis HOM05D003069 ORTHO05D000002 1.1e-08 66.2 46 78.3
Carub.0003s3420 Capsella rubella HOM05D004485 ORTHO05D005485 1.9e-08 65.5 324 22.2
arahy.Tifrunner.gnm1.ann1.U711QF Arachis hypogaea HOM05D004897 ORTHO05D005928 2.5e-08 65.1 144 37.5
Prupe.5G050900 Prunus persica HOM05D004897 ORTHO05D005928 3.3e-08 64.7 42 76.2
Sp3g33270 Schrenkiella parvula HOM05D004485 ORTHO05D005485 3.3e-08 64.7 338 23.1
VMungo0464G1472 Vigna mungo HOM05D004485 ORTHO05D005485 3.3e-08 64.7 361 21.9
SEGI_22595 Sequoiadendron giganteum HOM05D004897 ORTHO05D005928 5.6e-08 63.9 125 40.8
AL3G48250 Arabidopsis lyrata HOM05D004485 ORTHO05D005485 9.6e-08 63.2 351 22.2
PGR102G0995 Punica granatum HOM05D004485 ORTHO05D005485 9.6e-08 63.2 270 23.7
Gohir.A08G242800 Gossypium hirsutum HOM05D004485 ORTHO05D005485 1.2e-07 62.8 327 23.2
Manes.16G110100 Manihot esculenta HOM05D004485 ORTHO05D005485 1.6e-07 62.4 332 22.9
ECA236G0540 Erigeron canadensis HOM05D004485 ORTHO05D005485 2.1e-07 62.0 363 22.0
EL10Ac8g18398 Beta vulgaris HOM05D004485 ORTHO05D005485 2.8e-07 61.6 337 22.3
Ca_25562_v3 Cicer arietinum L. HOM05D004485 ORTHO05D005485 2.8e-07 61.6 325 20.9
Lj2g0014691 Lotus japonicus HOM05D004485 ORTHO05D005485 2.8e-07 61.6 301 22.3
MBI14_g27819_MAGBIO Magnolia biondii HOM05D004897 ORTHO05D022889 3.6e-07 61.2 74 52.7
THA.LOC104820040 Tarenaya hassleriana HOM05D004485 ORTHO05D005485 3.6e-07 61.2 270 24.1
BcaC05g25715 Brassica carinata HOM05D004897 ORTHO05D005928 4.7e-07 60.8 266 28.2
Thhalv10001922m.g Eutrema salsugineum HOM05D004485 ORTHO05D005485 4.7e-07 60.8 339 22.4
Prupe.7G033500 Prunus persica HOM05D004897 ORTHO05D005928 4.7e-07 60.8 71 54.9
RcHm_v2.0_Chr2g0091661 Rosa chinensis HOM05D004485 ORTHO05D005485 8.1e-07 60.1 310 22.9
AT2G19950 Arabidopsis thaliana HOM05D004485 ORTHO05D005485 1.1e-06 59.7 351 21.4
Lalb_Chr14g0371821 Lupinus albus HOM05D004485 ORTHO05D005485 1.1e-06 59.7 353 23.5
Solyc12g008390.3 Solanum lycopersicum HOM05D004485 ORTHO05D005485 1.1e-06 59.7 363 23.1
TPR.G21387 Trifolium pratense HOM05D004485 ORTHO05D005485 1.1e-06 59.7 325 21.2
Aa31LG8G16840 Aethionema arabicum HOM05D004485 ORTHO05D005485 1.4e-06 59.3 312 22.1
Prupe.7G221400 Prunus persica HOM05D004485 ORTHO05D005485 1.4e-06 59.3 348 23.3
FAN26G0748 Fragaria x ananassa HOM05D004485 ORTHO05D005485 1.8e-06 58.9 278 23.7
FAN26G2333 Fragaria x ananassa HOM05D004485 ORTHO05D005485 1.8e-06 58.9 278 23.7
CARHR110390 Cardamine hirsuta HOM05D004485 ORTHO05D005485 2.4e-06 58.5 329 24.0
FvH4_1g05970 Fragaria vesca HOM05D004485 ORTHO05D005485 2.4e-06 58.5 278 23.7
TAR624G1325 Trochodendron aralioides HOM05D004485 ORTHO05D005485 2.4e-06 58.5 352 24.1
Hund28808 Selenicereus undatus HOM05D004485 ORTHO05D005485 3.1e-06 58.2 182 27.5
Hund28810 Selenicereus undatus HOM05D004485 ORTHO05D005485 3.1e-06 58.2 182 27.5
HanXRQChr12g0358161 Helianthus annuus HOM05D004485 ORTHO05D005485 5.2e-06 57.4 318 21.1
Medtr6g088595 Medicago truncatula HOM05D004485 ORTHO05D005485 5.2e-06 57.4 300 22.0
CsaV3_2G001970 Cucumis sativus L. HOM05D004485 ORTHO05D005485 6.9e-06 57.0 360 21.4
CDE04G3494 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 9.0e-06 56.6 642 21.0


User provided reference genes

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