Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2476 Erigeron canadensis HOM05D004325 ORTHO05D005470 3.2e-102 375.2 199 100.0
Lsat_1_v5_gn_1_117981 Lactuca sativa HOM05D004325 ORTHO05D005470 1.2e-85 320.1 183 91.3
HanXRQChr17g0569361 Helianthus annuus HOM05D004325 ORTHO05D005470 3.5e-85 318.5 199 84.9
Hma1.2p1_0013F.1_g008360 Hydrangea macrophylla HOM05D004325 ORTHO05D005470 5.1e-84 314.7 194 85.1
CANSAT78G0850 Cannabis sativa HOM05D004325 ORTHO05D005470 6.7e-84 314.3 187 88.2
Haze_01324 Corylus avellana HOM05D004325 ORTHO05D005470 6.2e-82 307.8 181 86.2
Cfa015290 Carpinus fangiana HOM05D004325 ORTHO05D005470 1.1e-81 307.0 185 84.9
Atru.chr4.3046 Acer truncatum HOM05D004325 ORTHO05D005470 2.4e-81 305.8 179 86.6
Dinv44270 Davidia involucrata HOM05D004325 ORTHO05D005470 3.1e-81 305.4 199 82.4
MD13G1150800 Malus domestica HOM05D004325 ORTHO05D005470 5.3e-81 304.7 181 85.6
CSS0027180 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D005470 6.9e-81 304.3 195 82.6
MD16G1151300 Malus domestica HOM05D004325 ORTHO05D005470 6.9e-81 304.3 193 82.9
Lj6g0013793 Lotus japonicus HOM05D004325 ORTHO05D005470 9.0e-81 303.9 199 82.4
Gohir.A01G034900 Gossypium hirsutum HOM05D004325 ORTHO05D005470 1.2e-80 303.5 202 79.7
Duzib151G0878 Durio zibethinus HOM05D004325 ORTHO05D005470 2.0e-80 302.8 192 81.8
Eucgr.E02007 Eucalyptus grandis HOM05D004325 ORTHO05D005470 2.0e-80 302.8 191 82.2
Thecc.04G303800 Theobroma cacao HOM05D004325 ORTHO05D005470 2.0e-80 302.8 200 80.5
Prupe.1G115000 Prunus persica HOM05D004325 ORTHO05D005470 2.6e-80 302.4 193 82.4
TAR362G0217 Trochodendron aralioides HOM05D004325 ORTHO05D005470 2.6e-80 302.4 201 80.6
COL.COLO4_34588 Corchorus olitorius HOM05D004325 ORTHO05D005470 3.4e-80 302.0 191 81.7
Migut.N00036 Erythranthe guttata HOM05D004325 ORTHO05D005470 3.4e-80 302.0 181 85.1
Peaxi162Scf00228g00059 Petunia axillaris HOM05D004325 ORTHO05D005470 3.4e-80 302.0 190 82.6
Actinidia13352 Actinidia chinensis HOM05D004325 ORTHO05D005470 4.5e-80 301.6 199 79.9
CSS0047955 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D005470 5.8e-80 301.2 193 80.3
Cc03_g00680 Coffea canephora HOM05D004325 ORTHO05D005470 5.8e-80 301.2 196 81.6
Duzib052G1161 Durio zibethinus HOM05D004325 ORTHO05D005470 7.6e-80 300.8 192 81.8
arahy.Tifrunner.gnm1.ann1.NK7FC1 Arachis hypogaea HOM05D004325 ORTHO05D005470 1.3e-79 300.1 198 80.3
Sopen05g031900 Solanum pennellii HOM05D004325 ORTHO05D005470 1.3e-79 300.1 180 85.0
Lalb_Chr12g0200831 Lupinus albus HOM05D004325 ORTHO05D005470 2.2e-79 299.3 199 80.4
Cpa.g.sc9.38 Carica papaya HOM05D004325 ORTHO05D005470 2.9e-79 298.9 192 82.3
Manes.03G206300 Manihot esculenta HOM05D004325 ORTHO05D005470 2.9e-79 298.9 186 83.3
Rhsim02G0002800 Rhododendron simsii HOM05D004325 ORTHO05D005470 2.9e-79 298.9 195 80.5
Gohir.D01G023556 Gossypium hirsutum HOM05D004325 ORTHO05D005470 4.9e-79 298.1 202 78.7
Gorai.002G030800 Gossypium raimondii HOM05D004325 ORTHO05D005470 4.9e-79 298.1 202 78.7
CARHR287830 Cardamine hirsuta HOM05D004325 ORTHO05D005470 6.5e-79 297.7 186 81.2
RcHm_v2.0_Chr4g0425791 Rosa chinensis HOM05D004325 ORTHO05D005470 6.5e-79 297.7 195 80.5
MBI19_g03261_MAGBIO Magnolia biondii HOM05D004325 ORTHO05D005470 8.4e-79 297.4 174 86.2
Sed0024233 Sechium edule HOM05D004325 ORTHO05D005470 8.4e-79 297.4 192 80.7
Solyc05g053390.4 Solanum lycopersicum HOM05D004325 ORTHO05D005470 8.4e-79 297.4 199 78.9
arahy.Tifrunner.gnm1.ann1.H88EK8 Arachis hypogaea HOM05D004325 ORTHO05D005470 1.4e-78 296.6 198 79.8
arahy.Tifrunner.gnm1.ann1.RG9184 Arachis hypogaea HOM05D004325 ORTHO05D005470 1.4e-78 296.6 198 79.8
Nitab4.5_0000647g0250 Nicotiana tabacum HOM05D004325 ORTHO05D005470 1.4e-78 296.6 180 83.3
PGSC0003DMG400027209 Solanum tuberosum HOM05D004325 ORTHO05D005470 1.4e-78 296.6 180 83.9
VMungo0540G0568 Vigna mungo HOM05D004325 ORTHO05D005470 1.4e-78 296.6 193 80.8
Sc25g0003210 Simmondsia chinensis HOM05D004325 ORTHO05D005470 1.9e-78 296.2 191 79.6
TAR633G1272 Trochodendron aralioides HOM05D004325 ORTHO05D005470 1.9e-78 296.2 175 85.7
Nitab4.5_0004165g0020 Nicotiana tabacum HOM05D004325 ORTHO05D005470 3.2e-78 295.4 180 82.8
Ciclev10005911m.g Citrus clementina HOM05D004325 ORTHO05D005470 7.1e-78 294.3 193 79.3
Thhalv10004957m.g Eutrema salsugineum HOM05D004325 ORTHO05D005470 9.3e-78 293.9 188 80.9
AUR62039261 Chenopodium quinoa HOM05D004325 ORTHO05D005470 1.2e-77 293.5 188 81.4
Ca_00969_v3 Cicer arietinum L. HOM05D004325 ORTHO05D005470 1.6e-77 293.1 195 79.5
ClCG05G006650 Citrullus lanatus HOM05D004325 ORTHO05D005470 1.6e-77 293.1 197 80.2
Glyma.09G034400 Glycine max HOM05D004325 ORTHO05D005470 1.6e-77 293.1 199 79.4
SGA_v2.0_scaffold528G52737 Striga asiatica HOM05D004325 ORTHO05D005470 1.6e-77 293.1 208 75.5
AT5G49510 Arabidopsis thaliana HOM05D004325 ORTHO05D005470 2.1e-77 292.7 185 80.5
BcaB04g19615 Brassica carinata HOM05D004325 ORTHO05D005470 2.1e-77 292.7 187 79.7
BraA09t36122Z Brassica rapa HOM05D004325 ORTHO05D005470 2.1e-77 292.7 186 80.6
Carub.0008s0936 Capsella rubella HOM05D004325 ORTHO05D005470 2.1e-77 292.7 186 81.7
FvH4_4g20250 Fragaria vesca HOM05D004325 ORTHO05D005470 2.1e-77 292.7 195 79.0
Medtr2g033830 Medicago truncatula HOM05D004325 ORTHO05D005470 2.1e-77 292.7 195 80.0
AUR62016229 Chenopodium quinoa HOM05D004325 ORTHO05D005470 2.7e-77 292.4 183 82.5
Phvul.006G119000 Phaseolus vulgaris HOM05D004325 ORTHO05D005470 2.7e-77 292.4 175 84.0
Sed0016650 Sechium edule HOM05D004325 ORTHO05D005470 2.7e-77 292.4 191 80.1
PGR004G2019 Punica granatum HOM05D004325 ORTHO05D005470 3.5e-77 292.0 196 80.6
AL8G23260 Arabidopsis lyrata HOM05D004325 ORTHO05D005470 4.6e-77 291.6 185 80.0
BcaC04g23736 Brassica carinata HOM05D004325 ORTHO05D005470 4.6e-77 291.6 186 80.1
C09p05230 Brassica napus HOM05D004325 ORTHO05D005470 4.6e-77 291.6 186 80.1
Glyma.15G139100 Glycine max HOM05D004325 ORTHO05D005470 4.6e-77 291.6 194 78.9
PSO421G0271 Papaver somniferum HOM05D004325 ORTHO05D005470 7.9e-77 290.8 201 78.1
A09p04850 Brassica napus HOM05D004325 ORTHO05D005470 1.0e-76 290.4 186 80.1
Sp2g19810 Schrenkiella parvula HOM05D004325 ORTHO05D005470 1.3e-76 290.0 196 79.1
SpUn0021_0040 Schrenkiella parvula HOM05D004325 ORTHO05D005470 1.3e-76 290.0 196 79.1
THA.LOC104827099 Tarenaya hassleriana HOM05D004325 ORTHO05D005470 1.3e-76 290.0 173 84.4
Eucgr.D01575 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.8e-76 289.7 191 79.1
Aa31LG11G8140 Aethionema arabicum HOM05D004325 ORTHO05D005470 2.3e-76 289.3 205 76.1
Sabra08G0078100 Salix brachista HOM05D004325 ORTHO05D005470 2.3e-76 289.3 194 77.3
Os12g0562900 Oryza sativa ssp. japonica HOM05D004325 ORTHO05D005470 3.9e-76 288.5 173 84.4
PSO832G3679 Papaver somniferum HOM05D004325 ORTHO05D005470 3.9e-76 288.5 195 78.5
Psat1g162400 Pisum sativum HOM05D004325 ORTHO05D005470 3.9e-76 288.5 195 78.5
Ah.13g071390 Amaranthus hybridus HOM05D004325 ORTHO05D005470 5.1e-76 288.1 186 79.6
Potri.008G103400 Populus trichocarpa HOM05D004325 ORTHO05D005470 5.1e-76 288.1 197 77.7
Zm00001eb136920 Zea mays HOM05D004325 ORTHO05D005470 6.7e-76 287.7 187 79.1
MSTRG.24825 Avicennia marina HOM05D004325 ORTHO05D005470 8.7e-76 287.3 172 85.5
Hund03133 Selenicereus undatus HOM05D004325 ORTHO05D005470 1.5e-75 286.6 174 82.8
TPR.G30807 Trifolium pratense HOM05D004325 ORTHO05D005470 1.9e-75 286.2 195 79.0
TWI73G0086 Tripterygium wilfordii HOM05D004325 ORTHO05D005470 1.9e-75 286.2 181 80.1
Zm00001eb028520 Zea mays HOM05D004325 ORTHO05D005470 1.9e-75 286.2 188 79.3
PSO724G0368 Papaver somniferum HOM05D004325 ORTHO05D005470 2.5e-75 285.8 201 77.6
ATR0693G272 Amborella trichopoda HOM05D004325 ORTHO05D005470 3.3e-75 285.4 187 79.7
vmacro15176 Vaccinium macrocarpon HOM05D004325 ORTHO05D005470 3.3e-75 285.4 237 68.4
A06p38330 Brassica napus HOM05D004325 ORTHO05D005470 5.7e-75 284.6 196 78.1
C07p39920 Brassica napus HOM05D004325 ORTHO05D005470 5.7e-75 284.6 196 78.1
BolC7t44524H Brassica oleracea HOM05D004325 ORTHO05D005470 5.7e-75 284.6 196 78.1
BraA06t26747Z Brassica rapa HOM05D004325 ORTHO05D005470 5.7e-75 284.6 196 78.1
CsaV3_3G015280 Cucumis sativus L. HOM05D004325 ORTHO05D005470 7.4e-75 284.3 202 77.2
Nitab4.5_0000177g0050 Nicotiana tabacum HOM05D004325 ORTHO05D005470 9.6e-75 283.9 194 76.3
PSO063G1209 Papaver somniferum HOM05D004325 ORTHO05D005470 1.3e-74 283.5 195 76.9
THA.LOC104802708 Tarenaya hassleriana HOM05D004325 ORTHO05D005470 1.6e-74 283.1 189 79.4
Nitab4.5_0000891g0010 Nicotiana tabacum HOM05D004325 ORTHO05D005470 2.1e-74 282.7 194 76.8
unitig_0.g2580 Utricularia gibba HOM05D004325 ORTHO05D005470 2.8e-74 282.3 174 80.5
Potri.010G147600 Populus trichocarpa HOM05D004325 ORTHO05D005470 4.8e-74 281.6 197 76.6
Hund11985 Selenicereus undatus HOM05D004325 ORTHO05D005470 4.8e-74 281.6 176 80.7
CDE01G0033 Ceratophyllum demersum HOM05D004325 ORTHO05D005470 6.3e-74 281.2 174 79.9
HPP92_027563 Vanilla planifolia HOM05D004325 ORTHO05D005470 1.1e-73 280.4 203 72.9
Aqoxy3G01635 Aquilegia oxysepala HOM05D004325 ORTHO05D005470 2.4e-73 279.3 187 79.1
FAN12G3971 Fragaria x ananassa HOM05D004325 ORTHO05D005470 2.6e-72 275.8 228 67.5
Lj3A833G34 Lonicera japonica HOM05D004325 ORTHO05D005470 2.9e-71 272.3 156 88.5
FAN07G0536 Fragaria x ananassa HOM05D004325 ORTHO05D005470 5.0e-71 271.6 237 65.0
BolC9t53449H Brassica oleracea HOM05D004325 ORTHO05D005470 7.9e-69 264.2 246 60.6
SalBow5G2618 Salvia bowleyana HOM05D004325 ORTHO05D005470 7.9e-69 264.2 159 85.5
Sabra10G0113800 Salix brachista HOM05D004325 ORTHO05D005470 2.3e-68 262.7 220 66.4
TWI09G1034 Tripterygium wilfordii HOM05D004325 ORTHO05D005470 3.7e-66 255.4 181 74.6
EL10Ac3g05527 Beta vulgaris HOM05D004325 ORTHO05D005470 1.8e-65 253.1 159 81.1
CAN.G945.3 Capsicum annuum HOM05D004325 ORTHO05D005470 5.9e-64 248.1 144 86.8
Nn3g21742 Nelumbo nucifera HOM05D004325 ORTHO05D005470 2.9e-63 245.7 181 72.9
GSVIVG01034969001 Vitis vinifera HOM05D004325 ORTHO05D005470 5.5e-62 241.5 135 90.4
Mapoly0057s0039 Marchantia polymorpha HOM05D004325 ORTHO05D005470 7.2e-62 241.1 168 70.8
SEGI_09014 Sequoiadendron giganteum HOM05D004325 ORTHO05D005470 2.7e-61 239.2 174 70.1
Eucgr.E01999 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.8e-60 236.5 191 68.6
SMO116G0307 Selaginella moellendorffii HOM05D004325 ORTHO05D005470 2.3e-60 236.1 183 67.8
TPR.G28959 Trifolium pratense HOM05D004325 ORTHO05D005470 1.1e-59 233.8 139 84.9
CiPaw.01G136700 Carya illinoinensis HOM05D004325 ORTHO05D005470 1.5e-59 233.4 135 86.7
Oeu001162.1 Olea europaea HOM05D004325 ORTHO05D005470 1.4e-57 226.9 131 87.8
Pp3c8_18130 Physcomitrium patens HOM05D004325 ORTHO05D005470 1.7e-55 219.9 175 64.6
AagrBONN_evm.TU.Sc2ySwM_344.4436 Anthoceros agrestis HOM05D004325 ORTHO05D005470 2.2e-55 219.5 176 61.9
Eucgr.E01982 Eucalyptus grandis HOM05D004325 ORTHO05D005470 2.3e-52 209.5 123 87.0
Lalb_Chr13g0298551 Lupinus albus HOM05D004325 ORTHO05D005470 6.7e-52 208.0 131 80.9
CiPaw.02G073600 Carya illinoinensis HOM05D004325 ORTHO05D005470 2.2e-50 203.0 205 59.0
MELO3C006723.2 Cucumis melo HOM05D004325 ORTHO05D005470 3.7e-50 202.2 149 72.5
CDE12G0495 Ceratophyllum demersum HOM05D004325 ORTHO05D005470 9.1e-49 197.6 121 81.8
HPP92_017247 Vanilla planifolia HOM05D004325 ORTHO05D005470 2.6e-48 196.1 133 77.4
Sopen01g024490 Solanum pennellii HOM05D004325 ORTHO05D005470 1.7e-47 193.4 113 85.8
MSTRG.3849 Avicennia marina HOM05D004325 ORTHO05D005470 7.2e-46 188.0 125 73.6
Eucgr.D01598 Eucalyptus grandis HOM05D004325 ORTHO05D005470 2.8e-42 176.0 109 82.6
Eucgr.D01586 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.4e-41 173.7 102 83.3
Actinidia18462 Actinidia chinensis HOM05D004325 ORTHO05D005470 1.0e-39 167.5 113 77.0
QL06p012738 Quercus lobata HOM05D004325 ORTHO05D005470 2.2e-39 166.4 105 80.0
Eucgr.D01580 Eucalyptus grandis HOM05D004325 ORTHO05D005470 5.2e-36 155.2 93 82.8
PRCOL_00000812 Prasinoderma coloniale HOM05D004325 ORTHO05D005470 1.5e-35 153.7 182 45.1
HPP92_017255 Vanilla planifolia HOM05D004325 ORTHO05D005470 9.8e-35 151.0 109 75.2
QL06p012730 Quercus lobata HOM05D004325 ORTHO05D005470 8.3e-34 147.9 99 78.8
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 9.1e-33 144.4 102 73.5
DCAR_026989 Daucus carota HOM05D004325 ORTHO05D005470 1.2e-32 144.1 99 80.8
Eucgr.D01581 Eucalyptus grandis HOM05D004325 ORTHO05D005470 5.9e-32 141.7 81 87.7
MCO08G322 Micromonas commoda HOM05D004325 ORTHO05D005470 2.9e-31 139.4 170 42.4
Haze_26161 Corylus avellana HOM05D004325 ORTHO05D005470 2.5e-30 136.3 169 41.4
Cre06.g261650 Chlamydomonas reinhardtii HOM05D004325 ORTHO05D005470 1.4e-28 130.6 190 36.8
MBI14_g36884_MAGBIO Magnolia biondii HOM05D004325 ORTHO05D005470 1.5e-27 127.1 113 61.9
Eucgr.D01577 Eucalyptus grandis HOM05D004325 ORTHO05D005470 2.6e-27 126.3 91 72.5
Glyma.07G238200 Glycine max HOM05D004325 ORTHO05D005470 1.7e-26 123.6 75 81.3
CBR_g12436 Chara braunii HOM05D004325 ORTHO05D005470 6.3e-26 121.7 88 67.0
Glyma.17G035301 Glycine max HOM05D004325 ORTHO05D005470 6.3e-26 121.7 99 68.7
Actinidia31558 Actinidia chinensis HOM05D004325 ORTHO05D005470 4.7e-21 105.5 66 78.8
Eucgr.E01978 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.3e-15 87.4 53 79.2
Solyc01g058597.1 Solanum lycopersicum HOM05D004325 ORTHO05D005470 1.2e-13 80.9 49 79.6
CSS0004484 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 3.6e-13 79.3 111 47.7
CSS0039135 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 1.1e-12 77.8 111 46.8
CSS0044452 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 1.1e-12 77.8 111 46.8
CSS0031168 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 4.0e-12 75.9 111 45.9
CSS0013046 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 5.2e-12 75.5 111 45.9
TPR.G25439 Trifolium pratense HOM05D004325 ORTHO05D005470 1.9e-09 67.0 115 41.7
Actinidia14254 Actinidia chinensis HOM05D004325 ORTHO05D005470 2.0e-08 63.5 36 83.3
TPR.G26018 Trifolium pratense HOM05D004325 ORTHO05D049290 3.5e-08 62.8 74 56.8
Glyma.07G158050 Glycine max HOM05D004325 ORTHO05D022134 9.5e-06 54.7 53 56.6


User provided reference genes

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