Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2442 Erigeron canadensis HOM05D005839 ORTHO05D005686 0.0e+00 1286.2 834 100.0
ECA233G5455 Erigeron canadensis HOM05D005839 ORTHO05D005686 3.8e-266 921.8 746 87.4
HanXRQChr07g0186001 Helianthus annuus HOM05D005839 ORTHO05D005686 4.7e-107 393.3 868 50.1
HanXRQChr02g0058441 Helianthus annuus HOM05D005839 ORTHO05D005686 5.8e-89 333.2 888 44.8
ECA233G0881 Erigeron canadensis HOM05D005839 ORTHO05D005686 4.6e-70 270.4 169 84.6
Lsat_1_v5_gn_6_58881 Lactuca sativa HOM05D005839 ORTHO05D005686 1.9e-60 238.4 882 43.4
ECA238G4483 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.1e-42 177.6 880 28.1
Actinidia28516 Actinidia chinensis HOM05D005839 ORTHO05D005686 1.7e-32 145.6 987 25.3
Gohir.D09G201300 Gossypium hirsutum HOM05D005839 ORTHO05D005686 6.1e-30 137.1 975 25.9
Peaxi162Scf00286g00911 Petunia axillaris HOM05D005839 ORTHO05D005686 8.8e-29 133.3 1024 25.6
Nitab4.5_0000037g0160 Nicotiana tabacum HOM05D005839 ORTHO05D005686 1.2e-28 132.9 977 25.1
Ciclev10004236m.g Citrus clementina HOM05D005839 ORTHO05D005686 2.6e-28 131.7 1016 33.0
Gorai.006G225000 Gossypium raimondii HOM05D005839 ORTHO05D005686 9.8e-28 129.8 959 24.7
MD04G1021500 Malus domestica HOM05D005839 ORTHO05D005686 2.2e-24 118.6 1031 24.5
Haze_11680 Corylus avellana HOM05D005839 ORTHO05D005686 2.9e-24 118.2 143 48.3
Dinv32166 Davidia involucrata HOM05D005839 ORTHO05D005686 3.8e-24 117.9 284 40.1
arahy.Tifrunner.gnm1.ann1.3YD71H Arachis hypogaea HOM05D005839 ORTHO05D005686 1.1e-23 116.3 119 50.4
CAN.G1684.4 Capsicum annuum HOM05D005839 ORTHO05D005686 1.2e-22 112.8 980 25.1
Ah.04g149590 Amaranthus hybridus HOM05D005839 ORTHO05D005686 2.1e-22 112.1 334 31.7
Sopen09g035450 Solanum pennellii HOM05D005839 ORTHO05D005686 2.1e-22 112.1 997 25.6
Oeu049072.1 Olea europaea HOM05D005839 ORTHO05D005686 2.7e-22 111.7 931 24.8
Hund24442 Selenicereus undatus HOM05D005839 ORTHO05D005686 2.7e-22 111.7 272 34.6
Thecc.04G191800 Theobroma cacao HOM05D005839 ORTHO05D005686 3.6e-22 111.3 1104 22.7
Solyc09g092550.4 Solanum lycopersicum HOM05D005839 ORTHO05D005686 4.7e-22 110.9 985 24.5
CiPaw.01G113800 Carya illinoinensis HOM05D005839 ORTHO05D005686 1.0e-21 109.8 204 35.8
Gohir.A09G207800 Gossypium hirsutum HOM05D005839 ORTHO05D005686 1.0e-21 109.8 949 23.8
MSTRG.4261 Avicennia marina HOM05D005839 ORTHO05D005686 3.0e-21 108.2 312 32.4
Lsat_1_v5_gn_2_47881 Lactuca sativa HOM05D005839 ORTHO05D005686 5.2e-21 107.5 106 55.7
Atru.chr3.1776 Acer truncatum HOM05D005839 ORTHO05D005686 6.8e-21 107.1 107 54.2
arahy.Tifrunner.gnm1.ann1.SAUI5N Arachis hypogaea HOM05D005839 ORTHO05D005686 6.8e-21 107.1 271 32.5
Sabra14G0109900 Salix brachista HOM05D005839 ORTHO05D005686 6.8e-21 107.1 193 38.3
Potri.014G146200 Populus trichocarpa HOM05D005839 ORTHO05D005686 1.2e-20 106.3 280 31.8
GSVIVG01031570001 Vitis vinifera HOM05D005839 ORTHO05D005686 1.2e-20 106.3 351 32.8
Cc03_g09160 Coffea canephora HOM05D005839 ORTHO05D005686 1.5e-20 105.9 1112 24.6
Duzib151G0277 Durio zibethinus HOM05D005839 ORTHO05D005686 1.5e-20 105.9 373 32.2
FAN12G3285 Fragaria x ananassa HOM05D005839 ORTHO05D005686 1.5e-20 105.9 215 35.8
Potri.002G235900 Populus trichocarpa HOM05D005839 ORTHO05D005686 2.0e-20 105.5 1035 24.6
Hund19024 Selenicereus undatus HOM05D005839 ORTHO05D005686 2.0e-20 105.5 124 47.6
PGSC0003DMG401021870 Solanum tuberosum HOM05D005839 ORTHO05D005686 2.6e-20 105.1 1046 24.2
arahy.Tifrunner.gnm1.ann1.52QBHW Arachis hypogaea HOM05D005839 ORTHO05D005686 3.4e-20 104.8 109 48.6
Lj4g0005413 Lotus japonicus HOM05D005839 ORTHO05D005686 3.4e-20 104.8 312 33.0
Phvul.003G048600 Phaseolus vulgaris HOM05D005839 ORTHO05D005686 3.4e-20 104.8 182 38.5
Duzib151G0492 Durio zibethinus HOM05D005839 ORTHO05D005686 5.7e-20 104.0 355 30.1
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 7.5e-20 103.6 202 37.1
RcHm_v2.0_Chr4g0412531 Rosa chinensis HOM05D005839 ORTHO05D005686 9.8e-20 103.2 281 32.4
EL10Ac3g07436 Beta vulgaris HOM05D005839 ORTHO05D005686 2.8e-19 101.7 337 28.8
Actinidia35832 Actinidia chinensis HOM05D005839 ORTHO05D005686 8.3e-19 100.1 348 32.5
AUR62020882 Chenopodium quinoa HOM05D005839 ORTHO05D005686 8.3e-19 100.1 325 31.4
Prupe.1G170500 Prunus persica HOM05D005839 ORTHO05D005686 1.4e-18 99.4 1071 23.3
SalBow2G2330 Salvia bowleyana HOM05D005839 ORTHO05D005686 1.8e-18 99.0 121 47.9
SalBow2G2888 Salvia bowleyana HOM05D005839 ORTHO05D005686 1.8e-18 99.0 121 47.9
QL06p027171 Quercus lobata HOM05D005839 ORTHO05D005686 9.2e-18 96.7 1106 24.0
Eucgr.H02631 Eucalyptus grandis HOM05D005839 ORTHO05D005686 1.2e-17 96.3 1026 23.4
arahy.Tifrunner.gnm1.ann1.Q2NVSC Arachis hypogaea HOM05D005839 ORTHO05D000011 2.0e-17 95.5 99 49.5
ClCG05G007080 Citrullus lanatus HOM05D005839 ORTHO05D005686 2.0e-17 95.5 119 44.5
FvH4_4g12870 Fragaria vesca HOM05D005839 ORTHO05D005686 4.5e-17 94.4 273 30.8
Lalb_Chr12g0205781 Lupinus albus HOM05D005839 ORTHO05D005686 4.5e-17 94.4 123 47.2
AUR62018535 Chenopodium quinoa HOM05D005839 ORTHO05D005686 1.7e-16 92.4 371 29.1
Glyma.08G107100 Glycine max HOM05D005839 ORTHO05D005686 2.3e-16 92.0 1063 23.7
Manes.05G199100 Manihot esculenta HOM05D005839 ORTHO05D005686 2.3e-16 92.0 345 31.9
CsaV3_3G015820 Cucumis sativus L. HOM05D005839 ORTHO05D005686 5.0e-16 90.9 211 32.7
FvH4_1g13820 Fragaria vesca HOM05D005839 ORTHO05D005686 5.0e-16 90.9 55 70.9
BcaNung05575 Brassica carinata HOM05D010750 ORTHO05D005686 6.6e-16 90.5 119 45.4
Cpa.g.sc157.17 Carica papaya HOM05D005839 ORTHO05D005686 6.6e-16 90.5 236 35.2
Migut.G00951 Erythranthe guttata HOM05D005839 ORTHO05D005686 6.6e-16 90.5 353 27.8
PGSC0003DMG400021878 Solanum tuberosum HOM05D005839 ORTHO05D005686 8.6e-16 90.1 266 34.6
COL.COLO4_04260 Corchorus olitorius HOM05D005839 ORTHO05D005686 1.1e-15 89.7 973 23.1
Sabra02G0179700 Salix brachista HOM05D005839 ORTHO05D005686 1.1e-15 89.7 1020 23.3
Hma1.2p1_1457F.1_g284680 Hydrangea macrophylla HOM05D005839 ORTHO05D005686 1.5e-15 89.4 253 36.0
Sed0018641 Sechium edule HOM05D005839 ORTHO05D005686 1.5e-15 89.4 116 40.5
PGR083G0592 Punica granatum HOM05D005839 ORTHO05D005686 1.9e-15 89.0 202 32.7
Sed0009973 Sechium edule HOM05D005839 ORTHO05D005686 1.9e-15 89.0 111 44.1
Ca_16430_v3 Cicer arietinum L. HOM05D005839 ORTHO05D005686 4.3e-15 87.8 119 46.2
Glyma.05G150200 Glycine max HOM05D005839 ORTHO05D005686 4.3e-15 87.8 1108 22.5
Hma1.2p1_0984F.1_g244280 Hydrangea macrophylla HOM05D005839 ORTHO05D005686 9.5e-15 86.7 312 33.7
A08p24270 Brassica napus HOM05D010750 ORTHO05D005686 1.2e-14 86.3 124 43.5
BraA08t34382Z Brassica rapa HOM05D010750 ORTHO05D005686 1.2e-14 86.3 124 43.5
arahy.Tifrunner.gnm1.ann1.CIA2YT Arachis hypogaea HOM05D005839 ORTHO05D005686 1.6e-14 85.9 57 70.2
Gohir.D02G113200 Gossypium hirsutum HOM05D005839 ORTHO05D005686 2.1e-14 85.5 333 29.7
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 2.1e-14 85.5 978 23.4
C03p76940 Brassica napus HOM05D010750 ORTHO05D005686 2.8e-14 85.1 122 45.1
Lj6g0025267 Lotus japonicus HOM05D005839 ORTHO05D005686 2.8e-14 85.1 334 29.9
VMungo0251G1575 Vigna mungo HOM05D005839 ORTHO05D005686 2.8e-14 85.1 1105 22.1
BcaC01g00210 Brassica carinata HOM05D010750 ORTHO05D005686 3.6e-14 84.7 157 39.5
CSS0003065 Camellia sinensis var. sinensis HOM05D005839 ORTHO05D005686 4.7e-14 84.3 995 22.2
BolC3t19949H Brassica oleracea HOM05D010750 ORTHO05D005686 1.4e-13 82.8 206 34.5
Gorai.005G128100 Gossypium raimondii HOM05D005839 ORTHO05D005686 1.4e-13 82.8 334 30.2
Gohir.A10G130200 Gossypium hirsutum HOM05D005839 ORTHO05D005686 1.8e-13 82.4 930 22.4
Nn8g41260 Nelumbo nucifera HOM05D005839 ORTHO05D005686 1.8e-13 82.4 115 40.9
arahy.Tifrunner.gnm1.ann1.H8QNW8 Arachis hypogaea HOM05D005839 ORTHO05D005686 2.3e-13 82.0 211 32.7
Lj3A356G9 Lonicera japonica HOM05D005839 ORTHO05D005686 2.3e-13 82.0 278 34.2
Aqoxy2G04047 Aquilegia oxysepala HOM05D005839 ORTHO05D005686 5.2e-13 80.9 89 46.1
TAR636G0994 Trochodendron aralioides HOM05D005839 ORTHO05D005686 5.2e-13 80.9 279 31.2
Sc13g0000540 Simmondsia chinensis HOM05D005839 ORTHO05D005686 6.8e-13 80.5 302 30.1
Gohir.D10G136100 Gossypium hirsutum HOM05D005839 ORTHO05D005686 8.9e-13 80.1 904 22.0
Cpa.g.sc157.15 Carica papaya HOM05D005839 ORTHO05D005686 1.2e-12 79.7 119 42.0
DCAR_005282 Daucus carota HOM05D005839 ORTHO05D005686 1.2e-12 79.7 364 28.8
FAN22G0032 Fragaria x ananassa HOM05D005839 ORTHO05D005686 1.5e-12 79.3 267 32.2
Nn1g08130 Nelumbo nucifera HOM05D005839 ORTHO05D005686 1.5e-12 79.3 110 41.8
Medtr8g081010 Medicago truncatula HOM05D005839 ORTHO05D005686 2.0e-12 79.0 983 23.0
A04p07940 Brassica napus HOM05D010750 ORTHO05D005686 3.4e-12 78.2 245 31.4
Cpa.g.sc157.18 Carica papaya HOM05D005839 ORTHO05D005686 5.7e-12 77.4 118 39.0
Gorai.011G150900 Gossypium raimondii HOM05D005839 ORTHO05D005686 7.5e-12 77.0 927 22.4
ATR1147G004 Amborella trichopoda HOM05D005839 ORTHO05D005686 1.3e-11 76.3 217 35.0
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 1.3e-11 76.3 355 29.3
Sp7g12060 Schrenkiella parvula HOM05D010750 ORTHO05D005686 1.7e-11 75.9 362 28.5
Aa31LG9G3190 Aethionema arabicum HOM05D010750 ORTHO05D005686 2.2e-11 75.5 319 27.6
Ca_18007_v3 Cicer arietinum L. HOM05D005839 ORTHO05D005686 2.9e-11 75.1 989 22.5
Carub.0007s2819 Capsella rubella HOM05D010750 ORTHO05D005686 4.9e-11 74.3 321 29.6
TAR636G1565 Trochodendron aralioides HOM05D005839 ORTHO05D005686 6.4e-11 73.9 1026 20.8
BraA04t16484Z Brassica rapa HOM05D010750 ORTHO05D005686 8.3e-11 73.6 245 31.4
THA.LOC104808672 Tarenaya hassleriana HOM05D010750 ORTHO05D005686 1.1e-10 73.2 337 28.2
TAR365G0636 Trochodendron aralioides HOM05D005839 ORTHO05D005686 1.1e-10 73.2 391 27.1
SEGI_24376 Sequoiadendron giganteum HOM05D005839 ORTHO05D005686 3.2e-10 71.6 57 52.6
AT4G14200 Arabidopsis thaliana HOM05D010750 ORTHO05D005686 1.2e-09 69.7 257 28.0
arahy.Tifrunner.gnm1.ann1.62570H Arachis hypogaea HOM05D005839 ORTHO05D005686 1.6e-09 69.3 312 27.6
TWI53G2144 Tripterygium wilfordii HOM05D005839 ORTHO05D005686 1.6e-09 69.3 975 21.5
QL06p027203 Quercus lobata HOM05D034196 ORTHO05D005686 2.0e-09 68.9 35 80.0
Psat7g076360 Pisum sativum HOM05D005839 ORTHO05D005686 5.9e-09 67.4 258 31.4
Lalb_Chr07g0186961 Lupinus albus HOM05D005839 ORTHO05D005686 7.8e-09 67.0 131 35.9
Lj3A375G30 Lonicera japonica HOM05D005839 ORTHO05D005686 1.3e-08 66.2 183 41.0
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 3.9e-08 64.7 329 28.6
CANSAT78G1593 Cannabis sativa HOM05D005839 ORTHO05D005686 8.6e-08 63.5 940 23.0
CARHR220270 Cardamine hirsuta HOM05D010750 ORTHO05D005686 8.6e-08 63.5 870 21.4
Duzib268G0552 Durio zibethinus HOM05D005839 ORTHO05D005686 8.6e-08 63.5 1119 21.2
MELO3C006781.2 Cucumis melo HOM05D005839 ORTHO05D005686 9.5e-07 60.1 1074 21.2
Mapoly0008s0012 Marchantia polymorpha HOM05D005839 ORTHO05D005686 9.5e-07 60.1 62 45.2
arahy.Tifrunner.gnm1.ann1.SDG4EV Arachis hypogaea HOM05D005839 ORTHO05D005686 1.6e-06 59.3 256 28.1
Glyma.18G003300 Glycine max HOM05D005839 ORTHO05D005686 1.6e-06 59.3 122 34.4
SMO153G0001 Selaginella moellendorffii HOM05D005839 ORTHO05D005686 4.7e-06 57.8 34 55.9


User provided reference genes

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