Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 1.1e-184 649.8 325 100.0
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 1.1e-128 463.8 327 74.3
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.2e-118 428.3 327 69.1
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 5.2e-118 428.3 336 67.0
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 8.8e-118 427.6 339 66.4
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 2.0e-117 426.4 343 66.5
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.4e-117 425.6 327 68.8
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 7.5e-117 424.5 343 66.2
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 1.3e-116 423.7 343 66.2
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 1.3e-116 423.7 329 67.5
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 2.2e-116 422.9 338 67.2
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 2.2e-116 422.9 336 66.7
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.8e-116 422.5 325 68.9
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 1.8e-115 419.9 327 67.6
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 5.9e-114 414.8 339 65.8
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.9e-114 414.8 325 68.0
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 7.2e-112 407.9 326 65.0
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 1.2e-111 407.1 338 64.2
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.6e-111 406.8 328 65.5
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 1.6e-111 406.8 327 66.4
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 3.6e-111 405.6 326 64.7
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 4.7e-111 405.2 337 65.9
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 6.1e-111 404.8 337 65.6
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 2.3e-110 402.9 325 64.9
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 2.3e-110 402.9 332 66.3
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 4.0e-110 402.1 326 65.3
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 8.8e-110 401.0 352 61.4
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 1.2e-109 400.6 325 64.6
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 1.2e-109 400.6 326 64.4
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 3.4e-109 399.1 332 64.5
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 4.4e-109 398.7 332 65.4
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 7.5e-109 397.9 331 64.0
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 7.5e-109 397.9 328 63.7
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 2.8e-108 396.0 340 61.8
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 3.7e-108 395.6 318 66.7
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 8.3e-108 394.4 333 62.8
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 1.8e-107 393.3 313 65.8
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 1.8e-107 393.3 332 63.6
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 2.4e-107 392.9 332 62.7
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 7.0e-107 391.3 336 61.6
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 7.7e-106 387.9 331 63.4
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 1.7e-105 386.7 313 66.8
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 1.7e-105 386.7 330 63.6
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 2.9e-105 386.0 335 62.1
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 2.9e-105 386.0 338 58.9
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 5.0e-105 385.2 338 63.0
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 1.5e-104 383.6 331 62.5
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 1.5e-104 383.6 300 66.3
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 7.3e-104 381.3 377 57.6
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 2.1e-103 379.8 300 66.0
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 2.1e-103 379.8 312 66.0
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.1e-103 379.8 326 63.8
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 2.1e-103 379.8 324 61.4
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.0e-102 377.5 298 65.4
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 1.8e-102 376.7 296 66.6
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.0e-102 375.9 325 63.1
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 4.0e-102 375.6 336 60.7
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 1.5e-101 373.6 330 62.1
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 2.0e-101 373.2 298 64.8
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 9.8e-101 370.9 323 61.6
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 2.0e-98 363.2 335 59.1
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 2.5e-96 356.3 329 59.6
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 2.8e-95 352.8 325 59.1
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 2.6e-93 346.3 302 60.9
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 7.5e-93 344.7 279 65.9
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 1.7e-92 343.6 327 57.2
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 2.9e-92 342.8 274 63.5
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 6.4e-92 341.7 326 57.7
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 1.1e-91 340.9 316 59.2
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 7.0e-91 338.2 344 56.4
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 7.8e-90 334.7 294 59.9
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 3.9e-89 332.4 367 53.1
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-87 327.4 323 57.9
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 8.1e-87 324.7 340 53.8
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 4.4e-85 318.9 283 61.5
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 3.2e-83 312.8 233 67.4
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 1.1e-80 304.3 328 53.4
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.1e-79 298.1 279 59.5
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 4.4e-77 292.4 323 50.8
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 1.1e-75 287.7 219 66.7
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 1.6e-74 283.9 299 54.2
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 4.6e-74 282.3 221 66.5
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 9.6e-72 274.6 315 51.1
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 6.2e-71 271.9 222 64.0
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 6.2e-71 271.9 339 49.6
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.0e-70 269.2 327 52.6
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.2e-68 263.5 229 62.4
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.8e-68 262.7 327 49.8
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 9.3e-67 258.1 198 67.7
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 4.6e-66 255.8 327 49.5
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.0e-65 254.6 327 49.8
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 9.0e-62 241.5 276 51.1
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.4e-60 235.0 185 67.6
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 4.6e-58 229.2 186 66.7
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 1.3e-57 227.6 375 37.9
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 6.0e-50 202.2 277 42.6
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.1e-48 198.0 168 63.7
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 5.6e-48 195.7 170 58.8
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 3.7e-47 193.0 165 63.0
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 2.0e-45 187.2 183 54.6
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 1.0e-44 184.9 280 38.6
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 1.7e-36 157.5 296 38.2
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.6e-31 141.0 144 52.1
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 2.7e-26 123.6 241 34.9
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 1.6e-18 97.8 97 57.7
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 4.7e-18 96.3 101 51.5
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 6.7e-17 92.4 65 66.2
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 2.9e-12 77.0 343 24.8
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 1.5e-11 74.7 90 46.7
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 5.7e-08 62.8 40 67.5


User provided reference genes

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