Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2357 Erigeron canadensis HOM05D005547 ORTHO05D006887 3.6e-45 184.5 89 100.0
Lsat_1_v5_gn_5_36641 Lactuca sativa HOM05D005547 ORTHO05D006887 8.2e-34 146.7 93 79.6
HanXRQChr12g0365891 Helianthus annuus HOM05D005547 ORTHO05D006887 1.2e-32 142.9 76 86.8
CANSAT78G0133 Cannabis sativa HOM05D005547 ORTHO05D006887 2.2e-31 138.7 96 71.9
Atru.chr11.1034 Acer truncatum HOM05D005547 ORTHO05D006887 6.5e-31 137.1 86 72.1
Nitab4.5_0003889g0030 Nicotiana tabacum HOM05D005547 ORTHO05D006887 6.5e-31 137.1 91 73.6
SHI04242 Sapria himalayana HOM05D005547 ORTHO05D006887 6.5e-31 137.1 86 72.1
Potri.010G099900 Populus trichocarpa HOM05D005547 ORTHO05D006887 1.1e-30 136.3 97 68.0
Sabra10G0072400 Salix brachista HOM05D005547 ORTHO05D006887 1.9e-30 135.6 97 68.0
Solyc04g008490.2 Solanum lycopersicum HOM05D005547 ORTHO05D006887 1.9e-30 135.6 96 68.8
Sopen04g003640 Solanum pennellii HOM05D005547 ORTHO05D006887 1.9e-30 135.6 96 68.8
Ca_11205_v3 Cicer arietinum L. HOM05D005547 ORTHO05D006887 2.5e-30 135.2 76 80.3
PSO063G0668 Papaver somniferum HOM05D005547 ORTHO05D006887 2.5e-30 135.2 96 67.7
Ah.03g147190 Amaranthus hybridus HOM05D005547 ORTHO05D006887 3.2e-30 134.8 84 76.2
Potri.008G141900 Populus trichocarpa HOM05D005547 ORTHO05D006887 3.2e-30 134.8 97 68.0
TPR.G2488 Trifolium pratense HOM05D005547 ORTHO05D006887 3.2e-30 134.8 87 73.6
Psat6g231800 Pisum sativum HOM05D005547 ORTHO05D006887 4.2e-30 134.4 76 78.9
Sc03g0005980 Simmondsia chinensis HOM05D005547 ORTHO05D006887 4.2e-30 134.4 95 73.7
CAN.G458.10 Capsicum annuum HOM05D005547 ORTHO05D006887 5.5e-30 134.0 96 67.7
Phvul.007G019800 Phaseolus vulgaris HOM05D005547 ORTHO05D006887 5.5e-30 134.0 74 81.1
Sabra08G0107500 Salix brachista HOM05D005547 ORTHO05D006887 5.5e-30 134.0 96 66.7
TWI77G0558 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 5.5e-30 134.0 99 68.7
TWI77G0905 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 5.5e-30 134.0 99 68.7
Duzib248G0639 Durio zibethinus HOM05D005547 ORTHO05D006887 7.2e-30 133.7 98 68.4
Lj5g0000051 Lotus japonicus HOM05D005547 ORTHO05D006887 7.2e-30 133.7 84 72.6
Oeu024849.1 Olea europaea HOM05D005547 ORTHO05D006887 7.2e-30 133.7 74 81.1
Eucgr.B02628 Eucalyptus grandis HOM05D005547 ORTHO05D006887 9.4e-30 133.3 74 81.1
BcaC06g31254 Brassica carinata HOM05D005547 ORTHO05D006887 1.2e-29 132.9 98 69.4
BcaC06g31255 Brassica carinata HOM05D005547 ORTHO05D006887 1.2e-29 132.9 98 69.4
Duzib251G0939 Durio zibethinus HOM05D005547 ORTHO05D006887 1.2e-29 132.9 98 68.4
Migut.D01210 Erythranthe guttata HOM05D005547 ORTHO05D006887 1.2e-29 132.9 74 79.7
Lalb_Chr21g0306901 Lupinus albus HOM05D005547 ORTHO05D006887 1.2e-29 132.9 98 65.3
PSO782G2712 Papaver somniferum HOM05D005547 ORTHO05D006887 1.2e-29 132.9 96 65.6
Thecc.02G300400 Theobroma cacao HOM05D005547 ORTHO05D006887 1.2e-29 132.9 98 68.4
TWI53G0286 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 1.2e-29 132.9 99 68.7
CSS0022085 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 1.6e-29 132.5 97 69.1
CSS0041328 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 1.6e-29 132.5 97 69.1
DCAR_002637 Daucus carota HOM05D005547 ORTHO05D006887 1.6e-29 132.5 92 68.5
Gohir.D02G138400 Gossypium hirsutum HOM05D005547 ORTHO05D006887 1.6e-29 132.5 98 67.3
Peaxi162Scf00025g00059 Petunia axillaris HOM05D005547 ORTHO05D006887 1.6e-29 132.5 74 81.1
Prupe.1G340400 Prunus persica HOM05D005547 ORTHO05D006887 1.6e-29 132.5 98 67.3
unitig_699.g19647 Utricularia gibba HOM05D005547 ORTHO05D006887 1.6e-29 132.5 74 81.1
ClCG11G000640 Citrullus lanatus HOM05D005547 ORTHO05D006887 2.1e-29 132.1 92 68.5
Lalb_Chr02g0143381 Lupinus albus HOM05D005547 ORTHO05D006887 2.1e-29 132.1 98 65.3
Manes.15G140700 Manihot esculenta HOM05D005547 ORTHO05D006887 2.1e-29 132.1 98 65.3
Manes.17G091700 Manihot esculenta HOM05D005547 ORTHO05D006887 2.1e-29 132.1 98 64.3
Medtr1g112480 Medicago truncatula HOM05D005547 ORTHO05D006887 2.1e-29 132.1 73 80.8
Nitab4.5_0001091g0130 Nicotiana tabacum HOM05D005547 ORTHO05D006887 2.1e-29 132.1 100 66.0
BcaC06g34084 Brassica carinata HOM05D005547 ORTHO05D006887 2.7e-29 131.7 98 69.4
C07p32870 Brassica napus HOM05D005547 ORTHO05D006887 2.7e-29 131.7 98 69.4
BolC7t43802H Brassica oleracea HOM05D005547 ORTHO05D006887 2.7e-29 131.7 98 69.4
Glyma.20G108500 Glycine max HOM05D005547 ORTHO05D006887 2.7e-29 131.7 73 79.5
Nitab4.5_0000129g0490 Nicotiana tabacum HOM05D005547 ORTHO05D006887 2.7e-29 131.7 74 79.7
SGA_v2.0_scaffold65G22157 Striga asiatica HOM05D005547 ORTHO05D006887 2.7e-29 131.7 96 66.7
Ciclev10017277m.g Citrus clementina HOM05D005547 ORTHO05D006887 3.6e-29 131.3 99 64.6
COL.COLO4_27546 Corchorus olitorius HOM05D005547 ORTHO05D006887 3.6e-29 131.3 94 68.1
Haze_11478 Corylus avellana HOM05D005547 ORTHO05D006887 3.6e-29 131.3 96 71.9
THA.LOC104824108 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 3.6e-29 131.3 74 79.7
Cpa.g.sc2.79 Carica papaya HOM05D005547 ORTHO05D006887 4.7e-29 131.0 88 73.9
Gohir.A03G114100 Gossypium hirsutum HOM05D005547 ORTHO05D006887 4.7e-29 131.0 98 70.4
Gohir.D02G138500 Gossypium hirsutum HOM05D005547 ORTHO05D006887 4.7e-29 131.0 98 70.4
Gorai.005G154900 Gossypium raimondii HOM05D005547 ORTHO05D006887 4.7e-29 131.0 98 70.4
Gorai.005G155000 Gossypium raimondii HOM05D005547 ORTHO05D006887 4.7e-29 131.0 98 70.4
Nn8g41124 Nelumbo nucifera HOM05D005547 ORTHO05D006887 4.7e-29 131.0 96 66.7
THA.LOC104805110 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 4.7e-29 131.0 74 79.7
ATR0807G170 Amborella trichopoda HOM05D005547 ORTHO05D006887 6.1e-29 130.6 95 67.4
BcaB07g30360 Brassica carinata HOM05D005547 ORTHO05D006887 6.1e-29 130.6 74 79.7
BcaC04g21537 Brassica carinata HOM05D005547 ORTHO05D006887 6.1e-29 130.6 74 79.7
A09p23740 Brassica napus HOM05D005547 ORTHO05D006887 6.1e-29 130.6 74 79.7
C09p30580 Brassica napus HOM05D005547 ORTHO05D006887 6.1e-29 130.6 74 79.7
BolC9t55922H Brassica oleracea HOM05D005547 ORTHO05D006887 6.1e-29 130.6 74 79.7
BraA09t37975Z Brassica rapa HOM05D005547 ORTHO05D006887 6.1e-29 130.6 74 79.7
Thhalv10005178m.g Eutrema salsugineum HOM05D005547 ORTHO05D006887 6.1e-29 130.6 74 79.7
Rhsim09G0081900 Rhododendron simsii HOM05D005547 ORTHO05D006887 6.1e-29 130.6 74 79.7
Sp2g13460 Schrenkiella parvula HOM05D005547 ORTHO05D006887 6.1e-29 130.6 74 79.7
Aa31LG2G7900 Aethionema arabicum HOM05D000012 ORTHO05D000567 8.0e-29 130.2 74 79.7
MSTRG.13653 Avicennia marina HOM05D005547 ORTHO05D006887 8.0e-29 130.2 73 80.8
Duzib268G1003 Durio zibethinus HOM05D005547 ORTHO05D006887 8.0e-29 130.2 98 67.3
Cfa015074 Carpinus fangiana HOM05D005547 ORTHO05D006887 1.0e-28 129.8 96 70.8
AUR62003480 Chenopodium quinoa HOM05D005547 ORTHO05D006887 1.0e-28 129.8 89 71.9
MELO3C022540.2 Cucumis melo HOM05D005547 ORTHO05D006887 1.0e-28 129.8 74 77.0
MD16G1010200 Malus domestica HOM05D005547 ORTHO05D006887 1.0e-28 129.8 98 64.3
HPP92_022540 Vanilla planifolia HOM05D005547 ORTHO05D006887 1.0e-28 129.8 73 79.5
BcaB07g30717 Brassica carinata HOM05D005547 ORTHO05D006887 1.4e-28 129.4 87 70.1
BcaB07g30718 Brassica carinata HOM05D005547 ORTHO05D006887 1.4e-28 129.4 87 70.1
A06p43870 Brassica napus HOM05D005547 ORTHO05D006887 1.4e-28 129.4 74 78.4
BraA06t27263Z Brassica rapa HOM05D005547 ORTHO05D006887 1.4e-28 129.4 74 78.4
MD13G1013300 Malus domestica HOM05D005547 ORTHO05D006887 1.4e-28 129.4 98 66.3
QL03p040577 Quercus lobata HOM05D005547 ORTHO05D006887 1.4e-28 129.4 96 66.7
QL03p040948 Quercus lobata HOM05D005547 ORTHO05D006887 1.4e-28 129.4 96 66.7
SalBow2G0745 Salvia bowleyana HOM05D005547 ORTHO05D006887 1.4e-28 129.4 92 69.6
MSTRG.2096 Avicennia marina HOM05D005547 ORTHO05D006887 1.8e-28 129.0 96 66.7
A02p32590 Brassica napus HOM05D005547 ORTHO05D006887 1.8e-28 129.0 74 79.7
RcHm_v2.0_Chr4g0445601 Rosa chinensis HOM05D005547 ORTHO05D006887 1.8e-28 129.0 98 66.3
Zm00001eb002320 Zea mays HOM05D005547 ORTHO05D006887 2.3e-28 128.6 77 75.3
Sed0015045 Sechium edule HOM05D005547 ORTHO05D006887 4.0e-28 127.9 74 75.7
Sed0021722 Sechium edule HOM05D005547 ORTHO05D006887 4.0e-28 127.9 74 75.7
TAR295G0002 Trochodendron aralioides HOM05D005547 ORTHO05D006887 5.2e-28 127.5 98 62.2
TAR622G1295 Trochodendron aralioides HOM05D005547 ORTHO05D006887 5.2e-28 127.5 98 62.2
AL5G11260 Arabidopsis lyrata HOM05D005547 ORTHO05D006887 8.8e-28 126.7 74 75.7
Carub.0005s0107 Capsella rubella HOM05D005547 ORTHO05D006887 8.8e-28 126.7 74 75.7
MBI06_g19635_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 8.8e-28 126.7 95 65.3
MBI06_g29243_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 8.8e-28 126.7 95 65.3
Os03g0129900 Oryza sativa ssp. japonica HOM05D005547 ORTHO05D006887 8.8e-28 126.7 73 76.7
PGR142G0372 Punica granatum HOM05D005547 ORTHO05D006887 8.8e-28 126.7 74 78.4
FAN07G0567 Fragaria x ananassa HOM05D005547 ORTHO05D006887 1.2e-27 126.3 74 77.0
FAN17G0411 Fragaria x ananassa HOM05D005547 ORTHO05D006887 1.2e-27 126.3 74 77.0
Nitab4.5_0000944g0080 Nicotiana tabacum HOM05D005547 ORTHO05D006887 1.2e-27 126.3 68 83.8
FvH4_4g35970 Fragaria vesca HOM05D005547 ORTHO05D006887 1.5e-27 125.9 74 77.0
FAN12G1717 Fragaria x ananassa HOM05D005547 ORTHO05D006887 1.5e-27 125.9 74 77.0
Gohir.A03G114000 Gossypium hirsutum HOM05D005547 ORTHO05D006887 1.5e-27 125.9 98 68.4
CiPaw.06G057000 Carya illinoinensis HOM05D005547 ORTHO05D006887 3.3e-27 124.8 74 75.7
AUR62017789 Chenopodium quinoa HOM05D005547 ORTHO05D006887 3.3e-27 124.8 89 68.5
FAN22G0273 Fragaria x ananassa HOM05D005547 ORTHO05D006887 3.3e-27 124.8 74 75.7
Hma1.2p1_0068F.1_g037220 Hydrangea macrophylla HOM05D005547 ORTHO05D006887 4.4e-27 124.4 74 73.0
Ah.02g120230 Amaranthus hybridus HOM05D005547 ORTHO05D006887 5.7e-27 124.0 70 80.0
arahy.Tifrunner.gnm1.ann1.VES97W Arachis hypogaea HOM05D005547 ORTHO05D006887 1.7e-26 122.5 70 77.1
CARHR144680 Cardamine hirsuta HOM05D005547 ORTHO05D006887 3.7e-26 121.3 74 73.0
AT2G02050 Arabidopsis thaliana HOM05D005547 ORTHO05D006887 6.3e-26 120.6 74 71.6
MD17G1273300 Malus domestica HOM05D005547 ORTHO05D006887 3.1e-25 118.2 69 75.4
Cc11_g05010 Coffea canephora HOM05D005547 ORTHO05D006887 5.9e-24 114.0 64 78.1
Pp3c14_25130 Physcomitrium patens HOM05D005547 ORTHO05D006887 8.0e-21 103.6 85 56.5
Mapoly0058s0109 Marchantia polymorpha HOM05D005547 ORTHO05D006887 2.3e-20 102.1 69 60.9
Pp3c10_11190 Physcomitrium patens HOM05D005547 ORTHO05D006887 3.4e-19 98.2 83 53.0
arahy.Tifrunner.gnm1.ann1.FEK9G3 Arachis hypogaea HOM05D005547 ORTHO05D006887 3.7e-18 94.7 62 61.3
Haze_10731 Corylus avellana HOM05D005547 ORTHO05D006887 1.1e-17 93.2 63 65.1
SMO356G0087 Selaginella moellendorffii HOM05D005547 ORTHO05D006887 2.4e-17 92.0 65 58.5
CBR_g4786 Chara braunii HOM05D005547 ORTHO05D006887 3.1e-17 91.7 71 54.9
C02p50170 Brassica napus HOM05D005547 ORTHO05D006887 9.1e-17 90.1 63 71.4
BolC2t11096H Brassica oleracea HOM05D005547 ORTHO05D006887 9.1e-17 90.1 63 71.4
MCO06G054 Micromonas commoda HOM05D005547 ORTHO05D006887 9.1e-17 90.1 55 67.3
BcaC03g17109 Brassica carinata HOM05D005547 ORTHO05D006887 1.0e-15 86.7 74 60.8
GSVIVG01000609001 Vitis vinifera HOM05D005547 ORTHO05D006887 1.9e-14 82.4 52 71.2
Glyma.14G132200 Glycine max HOM05D005547 ORTHO05D006887 1.6e-08 62.8 86 44.2
Gorai.002G169600 Gossypium raimondii HOM05D005547 ORTHO05D006887 2.7e-08 62.0 98 42.9
PRCOL_00006370 Prasinoderma coloniale HOM05D005547 ORTHO05D006887 2.7e-08 62.0 73 41.1
Cre06.g278188 Chlamydomonas reinhardtii HOM05D005547 ORTHO05D006887 2.9e-07 58.5 75 41.3


User provided reference genes

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