Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 2.3e-83 312.4 179 100.0
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 2.4e-48 196.1 157 71.3
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 5.1e-43 178.3 169 65.1
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 2.0e-34 149.8 156 54.5
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 4.4e-34 148.7 142 59.2
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 5.7e-34 148.3 164 56.7
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 1.3e-33 147.1 149 56.4
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 1.7e-33 146.7 156 53.2
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 2.8e-33 146.0 107 69.2
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 4.8e-33 145.2 137 59.9
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 2.4e-32 142.9 146 54.8
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 5.3e-32 141.7 144 61.1
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 7.0e-32 141.4 106 67.0
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 7.0e-32 141.4 167 57.5
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 9.1e-32 141.0 146 54.8
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 9.1e-32 141.0 105 68.6
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 9.1e-32 141.0 130 60.8
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.5e-31 140.2 105 68.6
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 1.5e-31 140.2 105 68.6
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 1.5e-31 140.2 105 67.6
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 1.5e-31 140.2 155 55.5
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 2.0e-31 139.8 159 58.5
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 2.6e-31 139.4 168 52.4
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 2.6e-31 139.4 156 53.2
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 3.5e-31 139.0 132 62.9
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 3.5e-31 139.0 104 69.2
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 3.5e-31 139.0 150 56.0
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 4.5e-31 138.7 153 52.9
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.7e-31 137.9 153 53.6
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 1.0e-30 137.5 102 69.6
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.3e-30 137.1 154 51.9
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.3e-30 137.1 154 51.9
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 1.3e-30 137.1 146 55.5
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 1.7e-30 136.7 150 52.7
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 2.9e-30 136.0 137 57.7
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 3.8e-30 135.6 110 69.1
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 3.8e-30 135.6 156 52.6
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 5.0e-30 135.2 104 67.3
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.0e-30 135.2 154 51.3
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 5.0e-30 135.2 164 49.4
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 6.5e-30 134.8 142 54.9
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 8.5e-30 134.4 159 53.5
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 8.5e-30 134.4 158 50.0
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 8.5e-30 134.4 132 56.1
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 8.5e-30 134.4 144 54.9
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 8.5e-30 134.4 191 47.6
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 8.5e-30 134.4 126 57.1
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.5e-29 133.7 110 63.6
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.9e-29 133.3 154 50.6
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 1.9e-29 133.3 138 55.1
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 2.5e-29 132.9 145 54.5
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 2.5e-29 132.9 145 54.5
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 2.5e-29 132.9 145 54.5
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 2.5e-29 132.9 129 61.2
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 2.5e-29 132.9 136 54.4
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 3.2e-29 132.5 165 50.9
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 4.2e-29 132.1 136 53.7
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 4.2e-29 132.1 146 51.4
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 5.5e-29 131.7 142 52.8
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 7.2e-29 131.3 144 54.2
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.2e-29 131.3 154 50.6
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 9.4e-29 131.0 110 64.5
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 9.4e-29 131.0 111 60.4
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.2e-28 130.6 166 53.0
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.2e-28 130.6 111 61.3
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 1.2e-28 130.6 150 52.7
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 1.6e-28 130.2 111 61.3
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 1.6e-28 130.2 143 52.4
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 6.1e-28 128.3 143 51.0
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 2.3e-27 126.3 153 50.3
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 3.9e-27 125.6 129 55.8
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 6.7e-27 124.8 129 55.8
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 1.5e-26 123.6 111 59.5
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 2.0e-26 123.2 156 48.7
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 2.6e-26 122.9 158 49.4
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 2.6e-26 122.9 107 60.7
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 3.3e-26 122.5 155 49.7
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 9.7e-26 120.9 157 50.3
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 9.7e-26 120.9 144 50.0
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 1.3e-25 120.6 103 63.1
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 2.8e-25 119.4 146 47.3
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 3.7e-25 119.0 105 57.1
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 3.7e-25 119.0 103 62.1
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 6.3e-25 118.2 133 51.1
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 4.1e-24 115.5 103 55.3
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 2.6e-23 112.8 146 49.3
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 4.2e-21 105.5 87 63.2
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 4.7e-20 102.1 64 75.0
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 1.8e-19 100.1 137 48.9
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 2.3e-19 99.8 72 63.9
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 5.2e-19 98.6 144 47.9
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 8.3e-17 91.3 142 44.4
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 3.1e-16 89.4 178 36.0
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 8.5e-14 81.3 45 82.2
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 1.1e-13 80.9 123 43.1
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.6e-12 77.0 102 47.1
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 2.7e-12 76.3 47 74.5
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 4.7e-12 75.5 82 48.8
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 3.0e-11 72.8 143 35.7
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 1.7e-09 67.0 101 46.5
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 1.7e-09 67.0 101 46.5
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 9.1e-08 61.2 94 42.6
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.0e-07 60.1 64 50.0
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.0e-06 57.8 65 49.2
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 1.3e-06 57.4 105 41.9
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 1.3e-06 57.4 116 41.4


User provided reference genes

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