Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2226 Erigeron canadensis HOM05D000510 ORTHO05D014865 2.3e-66 255.4 124 100.0
ECA233G1270 Erigeron canadensis HOM05D000510 ORTHO05D007145 2.2e-32 142.5 92 77.2
Lsat_1_v5_gn_6_30481 Lactuca sativa HOM05D000510 ORTHO05D007145 8.5e-29 130.6 94 70.2
HanXRQChr13g0399731 Helianthus annuus HOM05D000510 ORTHO05D007145 6.7e-26 120.9 94 62.8
Lj3P981T35 Lonicera japonica HOM05D000510 ORTHO05D007145 4.1e-23 111.7 95 57.9
CSS0031128 Camellia sinensis var. sinensis HOM05D000510 ORTHO05D007145 1.0e-21 107.1 102 53.9
Hma1.2p1_0205F.1_g087510 Hydrangea macrophylla HOM05D000510 ORTHO05D007145 2.9e-21 105.5 100 53.0
QL07p044599 Quercus lobata HOM05D000510 ORTHO05D007145 8.5e-21 104.0 97 53.6
Cfa017543 Carpinus fangiana HOM05D000510 ORTHO05D007145 5.5e-20 101.3 98 51.0
TAR623G1605 Trochodendron aralioides HOM05D000510 ORTHO05D007145 5.5e-20 101.3 92 51.1
ClCG04G008970 Citrullus lanatus HOM05D000510 ORTHO05D007145 9.4e-20 100.5 98 53.1
CiPaw.09G176700 Carya illinoinensis HOM05D000510 ORTHO05D007145 1.2e-19 100.1 97 52.6
PGR004G1874 Punica granatum HOM05D000510 ORTHO05D007145 1.6e-19 99.8 102 48.0
MELO3C014245.2 Cucumis melo HOM05D000510 ORTHO05D007145 2.1e-19 99.4 98 53.1
CsaV3_6G039490 Cucumis sativus L. HOM05D000510 ORTHO05D007145 2.1e-19 99.4 98 53.1
Nitab4.5_0000101g0080 Nicotiana tabacum HOM05D000510 ORTHO05D007145 2.1e-19 99.4 96 51.0
Nitab4.5_0005150g0010 Nicotiana tabacum HOM05D000510 ORTHO05D007145 2.1e-19 99.4 93 51.6
COL.COLO4_27033 Corchorus olitorius HOM05D000510 ORTHO05D007145 2.7e-19 99.0 115 49.6
Eucgr.A01154 Eucalyptus grandis HOM05D000510 ORTHO05D007145 2.7e-19 99.0 95 52.6
Actinidia13088 Actinidia chinensis HOM05D000510 ORTHO05D007145 4.7e-19 98.2 98 52.0
Ciclev10011116m.g Citrus clementina HOM05D000510 ORTHO05D007145 4.7e-19 98.2 101 51.5
Prupe.6G237300 Prunus persica HOM05D000510 ORTHO05D007145 4.7e-19 98.2 99 49.5
SalBow3G0333 Salvia bowleyana HOM05D000510 ORTHO05D007145 4.7e-19 98.2 92 54.3
SalBow3G2932 Salvia bowleyana HOM05D000510 ORTHO05D007145 4.7e-19 98.2 92 54.3
FAN01G3130 Fragaria x ananassa HOM05D000510 ORTHO05D014865 6.1e-19 97.8 99 50.5
Cpa.g.sc102.4 Carica papaya HOM05D000510 ORTHO05D007145 8.0e-19 97.4 108 48.1
FAN02G2292 Fragaria x ananassa HOM05D000510 ORTHO05D007145 8.0e-19 97.4 99 50.5
FAN04G0783 Fragaria x ananassa HOM05D000510 ORTHO05D007145 8.0e-19 97.4 99 50.5
FAN05G4653 Fragaria x ananassa HOM05D000510 ORTHO05D007145 8.0e-19 97.4 99 50.5
FAN23G0304 Fragaria x ananassa HOM05D000510 ORTHO05D014865 8.0e-19 97.4 122 45.1
Sc02g0001850 Simmondsia chinensis HOM05D000510 ORTHO05D007145 8.0e-19 97.4 93 55.9
Atru.chr8.1872 Acer truncatum HOM05D000510 ORTHO05D007145 1.4e-18 96.7 98 50.0
EL10Ac7g16550 Beta vulgaris HOM05D000510 ORTHO05D007145 1.4e-18 96.7 91 53.8
AUR62040365 Chenopodium quinoa HOM05D000510 ORTHO05D007145 1.4e-18 96.7 91 54.9
AUR62042286 Chenopodium quinoa HOM05D000510 ORTHO05D007145 1.4e-18 96.7 91 54.9
Migut.J00552 Erythranthe guttata HOM05D000510 ORTHO05D007145 1.4e-18 96.7 97 50.5
FAN27G2377 Fragaria x ananassa HOM05D000510 ORTHO05D007145 1.4e-18 96.7 99 50.5
RcHm_v2.0_Chr3g0469481 Rosa chinensis HOM05D000510 ORTHO05D007145 1.8e-18 96.3 99 50.5
Duzib106G0978 Durio zibethinus HOM05D000510 ORTHO05D007145 2.3e-18 95.9 107 47.7
PSO339G1878 Papaver somniferum HOM05D000510 ORTHO05D007145 2.3e-18 95.9 94 48.9
PSO384G3222 Papaver somniferum HOM05D000510 ORTHO05D007145 2.3e-18 95.9 94 48.9
FvH4_6g15770 Fragaria vesca HOM05D000510 ORTHO05D007145 3.0e-18 95.5 99 49.5
CANSAT80G1010 Cannabis sativa HOM05D000510 ORTHO05D007145 4.0e-18 95.1 107 46.7
Sopen09g002600 Solanum pennellii HOM05D000510 ORTHO05D007145 5.2e-18 94.7 95 53.7
PGSC0003DMG400020907 Solanum tuberosum HOM05D000510 ORTHO05D007145 6.8e-18 94.4 96 54.2
Aqoxy2G03218 Aquilegia oxysepala HOM05D000510 ORTHO05D007145 8.8e-18 94.0 95 50.5
CSS0016683 Camellia sinensis var. sinensis HOM05D000510 ORTHO05D007145 1.2e-17 93.6 99 49.5
FAN09G2891 Fragaria x ananassa HOM05D000510 ORTHO05D007145 1.2e-17 93.6 99 48.5
FAN14G5466 Fragaria x ananassa HOM05D000510 ORTHO05D007145 1.2e-17 93.6 99 48.5
MBI07_g19320_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D007145 1.2e-17 93.6 93 52.7
Gohir.A09G150000 Gossypium hirsutum HOM05D000510 ORTHO05D007145 2.6e-17 92.4 114 45.6
Gohir.D09G145900 Gossypium hirsutum HOM05D000510 ORTHO05D007145 2.6e-17 92.4 114 45.6
Ca_11468_v3 Cicer arietinum L. HOM05D000510 ORTHO05D007145 3.4e-17 92.0 98 49.0
Rhsim04G0147600 Rhododendron simsii HOM05D000510 ORTHO05D007145 3.4e-17 92.0 99 48.5
DCAR_020837 Daucus carota HOM05D000510 ORTHO05D007145 4.4e-17 91.7 97 48.5
Medtr1g064560 Medicago truncatula HOM05D000510 ORTHO05D007145 4.4e-17 91.7 98 46.9
CAN.G888.9 Capsicum annuum HOM05D000510 ORTHO05D007145 7.5e-17 90.9 93 54.8
Thecc.05G058500 Theobroma cacao HOM05D000510 ORTHO05D007145 7.5e-17 90.9 106 46.2
Gohir.D05G297100 Gossypium hirsutum HOM05D000510 ORTHO05D007145 9.8e-17 90.5 91 47.3
Sed0006147 Sechium edule HOM05D000510 ORTHO05D007145 1.3e-16 90.1 98 49.0
MSTRG.19154 Avicennia marina HOM05D000510 ORTHO05D007145 1.7e-16 89.7 97 49.5
SGA_v2.0_scaffold126G33926 Striga asiatica HOM05D000510 ORTHO05D007145 2.8e-16 89.0 97 52.6
Dinv35752 Davidia involucrata HOM05D000510 ORTHO05D007145 3.7e-16 88.6 101 50.5
Gorai.001G139900 Gossypium raimondii HOM05D000510 ORTHO05D014865 3.7e-16 88.6 91 46.2
Ah.15g092340 Amaranthus hybridus HOM05D000510 ORTHO05D007145 4.8e-16 88.2 92 51.1
Manes.08G006700 Manihot esculenta HOM05D000510 ORTHO05D007145 4.8e-16 88.2 105 42.9
TPR.G21201 Trifolium pratense HOM05D000510 ORTHO05D007145 4.8e-16 88.2 98 46.9
Gorai.009G314400 Gossypium raimondii HOM05D000510 ORTHO05D007145 6.3e-16 87.8 91 46.2
Psat6g066880 Pisum sativum HOM05D000510 ORTHO05D007145 6.3e-16 87.8 98 46.9
Aa31LG5G20170 Aethionema arabicum HOM05D000510 ORTHO05D007145 8.3e-16 87.4 96 45.8
Thhalv10016278m.g Eutrema salsugineum HOM05D000510 ORTHO05D007145 8.3e-16 87.4 97 46.4
FAN26G2271 Fragaria x ananassa HOM05D000510 ORTHO05D014865 8.3e-16 87.4 93 49.5
Gohir.A05G297200 Gossypium hirsutum HOM05D000510 ORTHO05D007145 8.3e-16 87.4 91 45.1
Glyma.10G052600 Glycine max HOM05D000510 ORTHO05D007145 1.1e-15 87.0 95 48.4
Gohir.D07G129350 Gossypium hirsutum HOM05D000510 ORTHO05D014865 1.1e-15 87.0 91 46.2
MD12G1119400 Malus domestica HOM05D000510 ORTHO05D007145 1.4e-15 86.7 99 46.5
VMungo0720G1200 Vigna mungo HOM05D000510 ORTHO05D007145 1.4e-15 86.7 95 49.5
Cc06_g03880 Coffea canephora HOM05D000510 ORTHO05D007145 1.8e-15 86.3 96 46.9
TWI53G2119 Tripterygium wilfordii HOM05D000510 ORTHO05D007145 1.8e-15 86.3 102 44.1
MD04G1098700 Malus domestica HOM05D000510 ORTHO05D007145 2.4e-15 85.9 99 46.5
Duzib128G1672 Durio zibethinus HOM05D000510 ORTHO05D007145 3.1e-15 85.5 106 45.3
Glyma.13G139800 Glycine max HOM05D000510 ORTHO05D007145 3.1e-15 85.5 97 47.4
Phvul.007G220700 Phaseolus vulgaris HOM05D000510 ORTHO05D007145 3.1e-15 85.5 95 48.4
BcaB01g03650 Brassica carinata HOM05D000510 ORTHO05D007145 5.4e-15 84.7 92 46.7
CARHR084230 Cardamine hirsuta HOM05D000510 ORTHO05D007145 7.0e-15 84.3 103 47.6
Lj1P915T26 Lonicera japonica HOM05D000510 ORTHO05D007145 7.0e-15 84.3 96 44.8
Lalb_Chr21g0314771 Lupinus albus HOM05D000510 ORTHO05D007145 1.2e-14 83.6 112 42.0
Thecc.10G072000 Theobroma cacao HOM05D000510 ORTHO05D007145 1.2e-14 83.6 91 46.2
CSS0047243 Camellia sinensis var. sinensis HOM05D000510 ORTHO05D007145 1.6e-14 83.2 96 45.8
Carub.0004s2122 Capsella rubella HOM05D000510 ORTHO05D007145 1.6e-14 83.2 96 44.8
Sp3g08120 Schrenkiella parvula HOM05D000510 ORTHO05D007145 3.5e-14 82.0 108 45.4
CANSAT56G1401 Cannabis sativa HOM05D000510 ORTHO05D007145 4.5e-14 81.6 93 44.1
Thhalv10020117m.g Eutrema salsugineum HOM05D000510 ORTHO05D007145 4.5e-14 81.6 110 42.7
Lj5g0004161 Lotus japonicus HOM05D000510 ORTHO05D007145 4.5e-14 81.6 100 45.0
TWI63G0962 Tripterygium wilfordii HOM05D000510 ORTHO05D007145 1.0e-13 80.5 92 42.4
Aa31LG3G2240 Aethionema arabicum HOM05D000510 ORTHO05D007145 1.3e-13 80.1 98 49.0
AL3G21010 Arabidopsis lyrata HOM05D000510 ORTHO05D007145 1.3e-13 80.1 112 42.9
AT2G39180 Arabidopsis thaliana HOM05D000510 ORTHO05D007145 1.3e-13 80.1 96 43.8
AT3G09780 Arabidopsis thaliana HOM05D000510 ORTHO05D007145 1.3e-13 80.1 108 43.5
Carub.0003s0887 Capsella rubella HOM05D000510 ORTHO05D007145 1.3e-13 80.1 109 42.2
THA.LOC104825218 Tarenaya hassleriana HOM05D000510 ORTHO05D007145 1.7e-13 79.7 98 42.9
A03p21890 Brassica napus HOM05D000510 ORTHO05D007145 2.2e-13 79.3 93 46.2
C03p25960 Brassica napus HOM05D000510 ORTHO05D007145 2.2e-13 79.3 93 46.2
BolC3t14981H Brassica oleracea HOM05D000510 ORTHO05D007145 2.2e-13 79.3 93 46.2
BraA03t11425Z Brassica rapa HOM05D000510 ORTHO05D007145 2.2e-13 79.3 93 46.2
Gorai.009G314300 Gossypium raimondii HOM05D000510 ORTHO05D007145 2.2e-13 79.3 92 42.4
QL08p056291 Quercus lobata HOM05D000510 ORTHO05D007145 2.2e-13 79.3 95 43.2
AL4G36480 Arabidopsis lyrata HOM05D000510 ORTHO05D007145 3.8e-13 78.6 96 42.7
Gohir.D05G297075 Gossypium hirsutum HOM05D000510 ORTHO05D014865 3.8e-13 78.6 92 41.3
CARHR133930 Cardamine hirsuta HOM05D000510 ORTHO05D007145 5.0e-13 78.2 96 42.7
FAN06G4425 Fragaria x ananassa HOM05D000510 ORTHO05D014865 6.5e-13 77.8 77 51.9
AL5G22160 Arabidopsis lyrata HOM05D000510 ORTHO05D014865 8.5e-13 77.4 103 44.7
A05p39330 Brassica napus HOM05D000510 ORTHO05D007145 1.1e-12 77.0 97 44.3
Peaxi162Scf00413g00316 Petunia axillaris HOM05D000510 ORTHO05D007145 1.1e-12 77.0 75 53.3
Potri.010G221200 Populus trichocarpa HOM05D000510 ORTHO05D007145 1.1e-12 77.0 94 42.6
Sp4g21510 Schrenkiella parvula HOM05D000510 ORTHO05D007145 1.1e-12 77.0 96 42.7
BolC5t34486H Brassica oleracea HOM05D000510 ORTHO05D007145 1.5e-12 76.6 98 43.9
BcaC05g29701 Brassica carinata HOM05D000510 ORTHO05D007145 1.9e-12 76.3 98 45.9
BraA05t22715Z Brassica rapa HOM05D000510 ORTHO05D007145 1.9e-12 76.3 98 43.9
AL5G17480 Arabidopsis lyrata HOM05D000510 ORTHO05D014865 2.5e-12 75.9 103 43.7
THA.LOC104826972 Tarenaya hassleriana HOM05D000510 ORTHO05D007145 3.2e-12 75.5 102 42.2
BcaC05g29485 Brassica carinata HOM05D000510 ORTHO05D007145 5.5e-12 74.7 98 42.9
C05p58330 Brassica napus HOM05D000510 ORTHO05D007145 5.5e-12 74.7 98 42.9
Sabra10G0170900 Salix brachista HOM05D000510 ORTHO05D007145 9.4e-12 73.9 94 40.4
arahy.Tifrunner.gnm1.ann1.EUJ23N Arachis hypogaea HOM05D000510 ORTHO05D007145 3.6e-11 72.0 106 40.6
arahy.Tifrunner.gnm1.ann1.V9XADN Arachis hypogaea HOM05D000510 ORTHO05D007145 3.6e-11 72.0 106 40.6
FAN06G2154 Fragaria x ananassa HOM05D000510 ORTHO05D014865 4.7e-11 71.6 77 49.4
Solyc09g007750.4 Solanum lycopersicum HOM05D000510 ORTHO05D007145 4.7e-11 71.6 93 48.4
Gorai.006G167000 Gossypium raimondii HOM05D000510 ORTHO05D007145 2.3e-10 69.3 90 44.4
Potri.016G089200 Populus trichocarpa HOM05D000510 ORTHO05D007145 4.0e-10 68.6 98 39.8
DCAR_019108 Daucus carota HOM05D003587 ORTHO05D007145 5.2e-10 68.2 94 38.3
Haze_20601 Corylus avellana HOM05D000510 ORTHO05D007145 3.4e-09 65.5 49 59.2
Haze_20603 Corylus avellana HOM05D000510 ORTHO05D007145 3.4e-09 65.5 49 59.2
Sabra16G0094900 Salix brachista HOM05D000510 ORTHO05D007145 5.7e-09 64.7 98 37.8
Nn2g10765 Nelumbo nucifera HOM05D000510 ORTHO05D007145 9.8e-09 63.9 93 36.6
Mapoly0082s0079 Marchantia polymorpha HOM05D000510 ORTHO05D007145 4.5e-06 55.1 90 32.2


User provided reference genes

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