Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2126 Erigeron canadensis HOM05D004206 ORTHO05D003325 3.3e-164 581.6 293 100.0
HanXRQChr14g0459281 Helianthus annuus HOM05D004206 ORTHO05D003325 3.3e-47 193.0 294 43.9
HanXRQChr14g0453751 Helianthus annuus HOM05D004206 ORTHO05D003325 4.0e-45 186.0 304 42.4
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 4.2e-42 176.0 278 42.8
ECA238G1623 Erigeron canadensis HOM05D000150 ORTHO05D000108 1.3e-35 154.5 290 39.3
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 1.7e-35 154.1 293 39.6
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 2.0e-28 130.6 266 38.7
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 1.7e-27 127.5 310 36.1
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 3.8e-27 126.3 256 39.5
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 6.5e-27 125.6 255 39.6
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 1.4e-26 124.4 265 37.0
CSS0004803 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 3.2e-26 123.2 270 36.7
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 9.3e-26 121.7 304 36.2
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 1.8e-24 117.5 296 36.1
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 8.7e-24 115.2 284 37.7
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 3.3e-23 113.2 281 32.7
Lsat_1_v5_gn_6_32400 Lactuca sativa HOM05D004206 ORTHO05D003325 9.7e-23 111.7 222 37.8
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 4.8e-22 109.4 305 33.1
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.8e-21 107.5 281 34.2
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 2.4e-21 107.1 262 37.4
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 6.9e-21 105.5 202 40.1
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 6.9e-21 105.5 258 34.9
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 1.2e-20 104.8 144 46.5
ECA248G2846 Erigeron canadensis HOM05D004206 ORTHO05D003325 5.0e-19 99.4 210 38.1
Actinidia13126 Actinidia chinensis HOM05D004206 ORTHO05D003325 4.2e-18 96.3 302 31.1
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 5.5e-18 95.9 262 33.6
vmacro20128 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 9.4e-18 95.1 279 32.6
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 2.1e-17 94.0 268 34.7
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 1.8e-16 90.9 309 33.7
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 3.0e-16 90.1 202 38.1
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 3.0e-16 90.1 270 34.8
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 2.0e-15 87.4 256 34.0
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 2.0e-15 87.4 236 33.1
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 2.0e-15 87.4 268 31.0
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 3.3e-15 86.7 320 31.2
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 7.4e-15 85.5 269 32.0
vmacro08670 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 7.4e-15 85.5 274 31.8
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 2.2e-14 84.0 261 33.0
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 3.7e-14 83.2 256 34.0
MSTRG.26756 Avicennia marina HOM05D004206 ORTHO05D003325 4.8e-14 82.8 131 43.5
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 4.8e-14 82.8 318 27.0
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 4.8e-14 82.8 318 27.0
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 6.3e-14 82.4 130 42.3
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 1.1e-13 81.6 205 34.1
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.1e-13 81.6 301 34.6
SalBow4G2008 Salvia bowleyana HOM05D004206 ORTHO05D003325 1.8e-13 80.9 152 42.8
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 1.8e-13 80.9 165 38.8
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 2.4e-13 80.5 170 39.4
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.4e-13 80.5 152 38.8
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 5.3e-13 79.3 198 34.8
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 5.3e-13 79.3 142 40.8
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 5.3e-13 79.3 211 34.1
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 6.9e-13 79.0 224 36.2
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 9.1e-13 78.6 254 33.1
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 9.1e-13 78.6 152 41.4
Actinidia05297 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.2e-12 78.2 217 33.2
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 1.5e-12 77.8 275 30.2
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 4.5e-12 76.3 198 34.3
Sabra06G0062000 Salix brachista HOM05D004206 ORTHO05D003325 4.5e-12 76.3 138 39.9
MSTRG.19101 Avicennia marina HOM05D004206 ORTHO05D003325 1.0e-11 75.1 221 33.0
HanXRQChr11g0349321 Helianthus annuus HOM05D004206 ORTHO05D003325 1.0e-11 75.1 69 58.0
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 1.3e-11 74.7 245 30.6
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 1.3e-11 74.7 257 31.9
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 1.7e-11 74.3 154 36.4
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 1.7e-11 74.3 287 29.3
Lsat_1_v5_gn_1_55700 Lactuca sativa HOM05D004206 ORTHO05D003325 2.2e-11 73.9 83 56.6
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 2.2e-11 73.9 139 40.3
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 2.9e-11 73.6 322 28.6
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 3.8e-11 73.2 284 29.6
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 3.8e-11 73.2 165 36.4
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 3.8e-11 73.2 149 40.3
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 5.0e-11 72.8 206 30.6
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 5.0e-11 72.8 203 32.5
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 5.0e-11 72.8 261 29.5
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 5.0e-11 72.8 281 30.2
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 6.5e-11 72.4 241 30.7
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 6.5e-11 72.4 190 33.7
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 6.5e-11 72.4 202 38.6
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 8.5e-11 72.0 183 34.4
Lsat_1_v5_gn_2_110560 Lactuca sativa HOM05D000437 ORTHO05D003325 8.5e-11 72.0 59 59.3
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 8.5e-11 72.0 313 29.1
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 1.1e-10 71.6 196 33.7
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 4.2e-10 69.7 192 32.8
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 5.5e-10 69.3 166 36.7
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 7.2e-10 68.9 241 31.1
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 9.4e-10 68.6 172 33.1
Gohir.A11G326100 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.2e-09 68.2 184 33.2
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 1.2e-09 68.2 146 42.5
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 1.6e-09 67.8 266 30.8
unitig_578.g15702 Utricularia gibba HOM05D004206 ORTHO05D003325 1.6e-09 67.8 80 51.2
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 3.6e-09 66.6 171 35.1
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 4.7e-09 66.2 200 34.0
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 6.1e-09 65.9 200 34.5
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 7.9e-09 65.5 200 34.0
SGA_v2.0_scaffold75G24932 Striga asiatica HOM05D004206 ORTHO05D003325 1.0e-08 65.1 248 27.4
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.0e-08 65.1 237 34.2
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 1.0e-08 65.1 163 33.7
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 1.4e-08 64.7 248 29.8
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.4e-08 64.7 254 31.5
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.4e-08 64.7 145 40.7
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 1.4e-08 64.7 266 31.2
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 1.4e-08 64.7 91 47.3
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 1.8e-08 64.3 177 32.8
Gohir.D11G345000 Gossypium hirsutum HOM05D004206 ORTHO05D003325 1.8e-08 64.3 181 29.8
PSO339G0439 Papaver somniferum HOM05D004206 ORTHO05D003325 1.8e-08 64.3 108 46.3
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 1.8e-08 64.3 138 38.4
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 1.8e-08 64.3 186 34.4
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 2.3e-08 63.9 115 40.0
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 2.3e-08 63.9 159 36.5
PSO206G0053 Papaver somniferum HOM05D004206 ORTHO05D003325 2.3e-08 63.9 108 46.3
Gorai.007G375400 Gossypium raimondii HOM05D004206 ORTHO05D003325 3.9e-08 63.2 181 29.8
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 1.5e-07 61.2 280 29.3
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 1.5e-07 61.2 233 33.0
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 2.0e-07 60.8 66 51.5
Lalb_Chr21g0314341 Lupinus albus HOM05D004206 ORTHO05D003325 2.6e-07 60.5 210 33.3
CDE02G3836 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 3.3e-07 60.1 186 30.1
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 4.4e-07 59.7 234 30.3
Lalb_Chr20g0113171 Lupinus albus HOM05D004206 ORTHO05D003325 4.4e-07 59.7 247 32.4
Hund07780 Selenicereus undatus HOM05D004206 ORTHO05D003325 5.7e-07 59.3 138 39.9
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 7.4e-07 58.9 180 35.0
COL.COLO4_14855 Corchorus olitorius HOM05D004206 ORTHO05D003325 9.7e-07 58.5 59 57.6
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 1.3e-06 58.2 197 32.0
PGR004G1990 Punica granatum HOM05D004206 ORTHO05D003325 1.3e-06 58.2 158 36.7
Lj5g0023302 Lotus japonicus HOM05D004206 ORTHO05D003325 1.7e-06 57.8 103 42.7
MBI14_g24307_MAGBIO Magnolia biondii HOM05D039687 ORTHO05D003325 1.7e-06 57.8 165 30.9
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 3.7e-06 56.6 126 41.3
TPR.G25989 Trifolium pratense HOM05D004206 ORTHO05D003325 3.7e-06 56.6 58 51.7
CDE09G0187 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 4.8e-06 56.2 72 41.7
Eucgr.A01242 Eucalyptus grandis HOM05D004206 ORTHO05D003325 4.8e-06 56.2 93 46.2
CSS0043919 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 6.3e-06 55.8 68 47.1
Lalb_Chr06g0171041 Lupinus albus HOM05D004206 ORTHO05D003325 6.3e-06 55.8 189 31.7
MBI14_g07165_MAGBIO Magnolia biondii HOM05D039687 ORTHO05D003325 8.2e-06 55.5 208 32.7
Manes.09G086700 Manihot esculenta HOM05D004206 ORTHO05D003325 8.2e-06 55.5 155 34.8


User provided reference genes

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