Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 0.0e+00 1209.5 576 100.0
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.7e-265 919.1 458 93.4
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 2.1e-263 912.1 458 92.8
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 9.8e-245 850.1 458 86.0
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.3e-241 839.7 458 84.7
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 2.5e-240 835.5 458 83.2
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 3.3e-240 835.1 458 84.1
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.3e-240 835.1 458 83.2
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 3.3e-240 835.1 458 83.6
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 4.2e-240 834.7 458 83.2
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.2e-239 833.2 458 83.6
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 2.1e-239 832.4 458 83.8
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 2.1e-239 832.4 458 83.8
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.7e-239 831.2 458 83.0
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 8.0e-239 830.5 458 83.0
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.8e-238 829.3 458 84.1
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.8e-238 829.3 458 84.1
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 2.3e-238 828.9 458 82.5
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 1.5e-237 826.2 458 82.5
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 2.0e-237 825.9 458 82.3
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 7.5e-237 823.9 458 81.7
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.3e-236 823.2 458 82.1
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 1.7e-236 822.8 459 81.9
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 2.8e-236 822.0 473 79.3
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 3.7e-236 821.6 458 81.2
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.7e-236 821.6 458 82.8
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 3.7e-236 821.6 458 83.0
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.1e-235 820.1 459 81.9
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.1e-235 820.1 458 82.5
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 2.4e-235 818.9 458 82.1
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 3.1e-235 818.5 458 81.2
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 7.0e-235 817.4 458 81.4
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 7.0e-235 817.4 458 81.9
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 9.2e-235 817.0 458 81.7
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 9.2e-235 817.0 458 81.4
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.6e-234 816.2 458 81.2
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.6e-234 816.2 458 81.2
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 2.7e-234 815.5 458 81.4
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 3.5e-234 815.1 458 81.9
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.0e-233 813.5 458 82.3
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.3e-233 813.1 458 80.8
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 1.3e-233 813.1 458 80.8
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 2.3e-233 812.4 458 80.6
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 2.9e-233 812.0 458 81.0
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 2.9e-233 812.0 459 80.0
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 3.8e-233 811.6 458 81.2
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.1e-232 810.1 458 79.3
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 2.5e-232 808.9 458 80.1
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 2.5e-232 808.9 458 80.1
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 7.3e-232 807.4 458 81.2
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 1.6e-231 806.2 458 79.9
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 6.1e-231 804.3 457 80.1
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 1.5e-229 799.7 479 78.3
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 2.0e-229 799.3 458 80.6
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 5.8e-229 797.7 458 79.5
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 2.2e-228 795.8 458 79.9
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 2.9e-228 795.4 458 79.3
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 2.9e-228 795.4 458 79.5
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 4.9e-228 794.7 458 79.9
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.1e-227 793.5 458 79.0
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 1.9e-227 792.7 459 79.5
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 7.8e-226 787.3 458 78.8
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.3e-225 786.6 458 80.1
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.5e-224 783.1 458 78.6
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 9.5e-224 780.4 458 77.7
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.2e-223 780.0 460 77.4
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 2.8e-223 778.9 485 74.8
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 4.0e-222 775.0 452 78.1
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 4.0e-222 775.0 458 79.0
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.7e-220 769.6 458 78.4
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.1e-219 766.9 439 79.0
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 9.2e-219 763.8 458 77.9
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.3e-217 760.0 458 77.3
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.8e-214 749.6 456 73.7
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 4.0e-214 748.4 458 76.2
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 1.5e-213 746.5 458 76.0
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 4.9e-212 741.5 496 71.2
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.1e-210 736.1 458 75.3
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.3e-209 733.4 458 72.5
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.1e-206 723.8 459 72.8
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 2.0e-205 719.5 463 71.7
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 6.6e-201 704.5 458 71.2
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 3.0e-193 679.1 496 66.1
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 2.0e-189 666.4 455 68.6
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 8.7e-185 651.0 458 67.0
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 1.3e-183 647.1 389 76.9
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.4e-181 639.0 458 63.3
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.9e-180 635.2 458 62.0
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 1.5e-176 623.6 451 62.7
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.1e-175 619.8 334 85.9
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 1.4e-174 617.1 337 84.6
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.3e-172 610.5 468 60.0
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-171 607.4 333 84.7
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.4e-171 607.1 334 84.7
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.1e-171 604.7 333 84.4
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 2.5e-168 596.3 459 58.2
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.3e-168 595.9 334 83.2
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.3e-168 595.9 334 83.2
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 6.3e-167 591.7 333 81.4
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 8.2e-167 591.3 319 85.3
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.1e-163 580.9 334 81.1
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 5.7e-160 568.5 333 79.6
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.6e-157 559.7 291 88.7
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 1.0e-153 547.7 460 52.8
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.7e-146 523.1 291 81.8
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.0e-144 516.9 296 82.4
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 7.0e-142 508.4 333 73.3
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 5.0e-140 502.3 296 80.7
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.0e-137 493.0 293 79.5
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.6e-133 480.7 273 80.2
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 2.0e-128 463.8 335 61.8
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 1.9e-123 447.2 280 74.3
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 1.1e-102 378.3 447 40.7
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 3.9e-92 343.2 482 37.3
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 3.5e-69 266.9 155 76.1
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.6e-53 213.4 106 89.6
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.6e-53 213.4 106 89.6
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.1e-53 213.0 106 89.6
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 8.2e-50 202.6 185 56.8
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.1e-35 155.6 99 78.8
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 5.9e-08 63.5 36 77.8


User provided reference genes

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