Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 2.0e-186 655.6 333 100.0
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 3.8e-156 555.1 332 86.1
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 1.9e-152 542.7 326 85.3
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 1.0e-137 493.8 325 76.9
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.4e-134 483.4 326 73.9
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 1.8e-134 483.0 328 73.8
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 6.9e-134 481.1 328 73.8
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 9.0e-134 480.7 339 72.0
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 2.6e-133 479.2 328 73.8
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 3.4e-133 478.8 339 71.7
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.8e-133 478.0 326 73.9
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.2e-132 476.1 326 73.9
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 2.2e-132 476.1 325 75.1
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 3.8e-132 475.3 333 71.5
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.9e-132 474.9 324 74.1
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 1.9e-131 473.0 327 71.6
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 4.2e-131 471.9 335 72.5
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 4.2e-131 471.9 336 72.3
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 4.2e-131 471.9 328 72.6
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 1.2e-130 470.3 319 74.9
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.6e-130 469.9 326 73.6
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 2.1e-130 469.5 320 73.8
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 3.5e-130 468.8 334 71.9
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 3.5e-130 468.8 319 74.6
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 3.5e-130 468.8 318 73.9
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 1.0e-129 467.2 326 73.0
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 5.1e-129 464.9 339 70.5
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 3.3e-128 462.2 324 71.3
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 5.6e-128 461.5 327 72.8
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 9.6e-128 460.7 318 73.6
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 1.3e-127 460.3 317 72.2
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 3.7e-127 458.8 337 68.5
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 4.8e-127 458.4 329 71.4
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 4.8e-127 458.4 328 69.8
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 8.2e-127 457.6 318 71.4
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 8.2e-127 457.6 329 71.1
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 1.1e-126 457.2 331 68.9
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 1.1e-126 457.2 331 69.8
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 1.8e-126 456.4 340 70.0
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 2.4e-126 456.1 318 73.6
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 4.0e-126 455.3 335 69.6
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 5.3e-126 454.9 325 70.2
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 5.3e-126 454.9 331 69.2
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 6.9e-126 454.5 333 69.1
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 9.0e-126 454.1 321 71.3
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 1.2e-125 453.8 319 72.1
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 1.5e-125 453.4 337 68.0
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 1.5e-125 453.4 317 71.6
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 2.6e-125 452.6 317 71.6
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 2.2e-124 449.5 320 70.0
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 2.9e-124 449.1 317 71.0
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 4.9e-124 448.4 332 68.1
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 6.5e-124 448.0 319 69.9
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 8.4e-124 447.6 316 70.9
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 1.9e-123 446.4 318 71.1
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 1.9e-123 446.4 321 69.5
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 1.9e-123 446.4 316 70.6
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 9.3e-123 444.1 318 69.2
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 9.3e-123 444.1 333 67.9
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 9.3e-123 444.1 329 68.7
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 1.6e-122 443.4 322 69.6
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 2.1e-122 443.0 318 68.9
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 4.6e-122 441.8 318 69.2
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 1.3e-121 440.3 318 68.6
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 1.3e-121 440.3 331 68.0
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 2.3e-121 439.5 318 68.6
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 8.7e-121 437.6 314 71.0
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 1.5e-120 436.8 340 66.8
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 1.9e-120 436.4 325 68.6
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.3e-120 435.6 337 66.8
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 7.4e-120 434.5 313 70.0
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 8.2e-119 431.0 324 68.8
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 5.3e-118 428.3 327 68.2
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 1.7e-116 423.3 332 66.9
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.5e-115 419.5 277 75.5
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 1.4e-113 413.7 328 65.9
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 3.0e-113 412.5 317 65.9
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 1.1e-112 410.6 333 65.2
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 1.7e-111 406.8 307 70.0
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 9.1e-110 401.0 320 66.6
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.9e-107 393.3 323 64.7
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 4.2e-107 392.1 268 72.8
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 6.7e-105 384.8 337 63.8
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 3.7e-103 379.0 427 51.3
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 8.2e-103 377.9 271 72.0
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 8.2e-103 377.9 401 54.1
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 1.7e-100 370.2 330 58.5
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 4.2e-99 365.5 319 62.1
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 1.2e-98 364.0 320 60.9
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 3.0e-97 359.4 352 56.8
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 3.7e-95 352.4 347 57.1
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 5.3e-94 348.6 318 56.9
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 5.7e-88 328.6 326 55.2
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 4.1e-86 322.4 238 72.7
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 1.2e-82 310.8 317 52.4
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 6.6e-76 288.5 204 70.1
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 5.4e-70 268.9 293 51.2
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 1.2e-56 224.6 359 41.2
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.5e-56 224.2 270 48.1
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 1.3e-52 211.1 303 39.9
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.5e-51 207.6 193 59.6
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.9e-46 190.7 185 55.1
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 2.5e-43 180.3 162 58.6
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.6e-40 170.2 104 79.8
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.7e-39 167.5 113 65.5
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 3.6e-34 149.8 106 68.9
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 1.3e-18 98.2 231 32.9
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 2.2e-15 87.4 52 82.7
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 3.0e-12 77.0 51 76.5
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.6e-10 71.2 81 49.4
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 5.5e-06 56.2 87 42.5


User provided reference genes

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