Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1752 Erigeron canadensis HOM05D006820 ORTHO05D008526 6.3e-157 557.4 277 100.0
HanXRQChr14g0459061 Helianthus annuus HOM05D006820 ORTHO05D008526 2.3e-98 362.8 214 84.6
Lsat_1_v5_gn_8_120400 Lactuca sativa HOM05D006820 ORTHO05D008526 1.5e-97 360.1 207 84.5
CSS0042496 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 1.7e-90 336.7 215 75.8
Lj9A405G64 Lonicera japonica HOM05D006820 ORTHO05D008526 5.1e-90 335.1 206 77.2
Nitab4.5_0011212g0060 Nicotiana tabacum HOM05D006820 ORTHO05D008526 1.4e-87 327.0 208 74.0
Duzib132G0878 Durio zibethinus HOM05D006820 ORTHO05D008526 2.4e-87 326.2 206 75.7
Manes.04G064800 Manihot esculenta HOM05D006820 ORTHO05D008526 2.4e-87 326.2 206 73.8
Nn6g31730 Nelumbo nucifera HOM05D006820 ORTHO05D008526 2.4e-87 326.2 206 74.3
Thecc.02G045600 Theobroma cacao HOM05D006820 ORTHO05D008526 2.4e-87 326.2 206 74.3
CAN.G1725.10 Capsicum annuum HOM05D006820 ORTHO05D008526 1.5e-86 323.6 209 73.2
TAR625G0986 Trochodendron aralioides HOM05D006820 ORTHO05D008526 2.0e-86 323.2 206 74.3
vmacro17294 Vaccinium macrocarpon HOM05D006820 ORTHO05D008526 2.6e-86 322.8 209 75.1
GSVIVG01023895001 Vitis vinifera HOM05D006820 ORTHO05D008526 3.4e-86 322.4 206 75.2
Ciclev10029216m.g Citrus clementina HOM05D006820 ORTHO05D008526 4.4e-86 322.0 206 74.3
Potri.009G165400 Populus trichocarpa HOM05D006820 ORTHO05D008526 9.9e-86 320.9 206 75.2
Peaxi162Scf00362g00246 Petunia axillaris HOM05D006820 ORTHO05D008526 1.7e-85 320.1 206 74.3
Actinidia32013 Actinidia chinensis HOM05D006820 ORTHO05D008526 2.2e-85 319.7 206 76.2
PGSC0003DMG400014660 Solanum tuberosum HOM05D006820 ORTHO05D008526 2.2e-85 319.7 208 72.1
Gorai.008G040700 Gossypium raimondii HOM05D006820 ORTHO05D008526 1.9e-84 316.6 207 72.9
QL11p053925 Quercus lobata HOM05D006820 ORTHO05D008526 5.4e-84 315.1 222 70.3
Atru.chr5.3527 Acer truncatum HOM05D006820 ORTHO05D008526 7.1e-84 314.7 206 73.3
DCAR_015665 Daucus carota HOM05D006820 ORTHO05D008526 1.2e-83 313.9 206 70.4
Migut.B00016 Erythranthe guttata HOM05D006820 ORTHO05D008526 1.6e-83 313.5 207 71.5
Solyc01g112160.4 Solanum lycopersicum HOM05D006820 ORTHO05D008526 1.6e-83 313.5 208 70.7
CiPaw.06G118200 Carya illinoinensis HOM05D006820 ORTHO05D008526 2.7e-83 312.8 206 71.8
Sopen01g054210 Solanum pennellii HOM05D006820 ORTHO05D008526 2.7e-83 312.8 208 70.7
CANSAT25G2916 Cannabis sativa HOM05D006820 ORTHO05D008526 1.3e-82 310.5 206 69.9
PGR142G1762 Punica granatum HOM05D006820 ORTHO05D008526 3.0e-82 309.3 207 71.5
PSO541G0178 Papaver somniferum HOM05D006820 ORTHO05D008526 5.1e-82 308.5 209 71.8
PSO675G9330 Papaver somniferum HOM05D006820 ORTHO05D008526 1.1e-81 307.4 209 71.3
Haze_02054 Corylus avellana HOM05D006820 ORTHO05D008526 5.6e-81 305.1 231 65.4
BcaC01g00221 Brassica carinata HOM05D006820 ORTHO05D008526 9.6e-81 304.3 208 69.7
BcaC01g00229 Brassica carinata HOM05D006820 ORTHO05D008526 1.3e-80 303.9 208 69.7
TWI79G0714 Tripterygium wilfordii HOM05D006820 ORTHO05D008526 4.8e-80 302.0 206 68.9
Sc18g0005950 Simmondsia chinensis HOM05D006820 ORTHO05D008526 6.2e-80 301.6 208 68.3
BraA08t34377Z Brassica rapa HOM05D000807 ORTHO05D000662 1.8e-79 300.1 208 68.8
AUR62012929 Chenopodium quinoa HOM05D006820 ORTHO05D008526 1.8e-79 300.1 206 68.4
FAN15G1990 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.8e-79 300.1 206 67.5
SGA_v2.0_scaffold58G20319 Striga asiatica HOM05D006820 ORTHO05D008526 1.8e-79 300.1 220 66.8
BolC3t19961H Brassica oleracea HOM05D000807 ORTHO05D000662 2.4e-79 299.7 208 68.3
Carub.0007s0026 Capsella rubella HOM05D006820 ORTHO05D008526 2.4e-79 299.7 206 68.9
FvH4_2g16540 Fragaria vesca HOM05D006820 ORTHO05D008526 2.4e-79 299.7 206 67.0
FAN24G1561 Fragaria x ananassa HOM05D006820 ORTHO05D008526 2.4e-79 299.7 206 67.0
Prupe.8G177600 Prunus persica HOM05D006820 ORTHO05D008526 2.4e-79 299.7 208 69.7
Ah.01g007660 Amaranthus hybridus HOM05D006820 ORTHO05D008526 3.1e-79 299.3 207 68.6
Aqoxy6G01707 Aquilegia oxysepala HOM05D006820 ORTHO05D008526 3.1e-79 299.3 206 69.9
Eucgr.I01511 Eucalyptus grandis HOM05D006820 ORTHO05D008526 3.1e-79 299.3 209 68.9
BraA08t34346Z Brassica rapa HOM05D006820 ORTHO05D008526 4.0e-79 298.9 208 68.8
EL10Ac9g21258 Beta vulgaris HOM05D006820 ORTHO05D008526 6.9e-79 298.1 207 67.6
CARHR294110 Cardamine hirsuta HOM05D006820 ORTHO05D008526 6.9e-79 298.1 208 69.2
Glyma.14G001800 Glycine max HOM05D006820 ORTHO05D008526 6.9e-79 298.1 208 67.8
Phvul.008G291600 Phaseolus vulgaris HOM05D006820 ORTHO05D008526 2.0e-78 296.6 206 68.0
AUR62011713 Chenopodium quinoa HOM05D006820 ORTHO05D008526 2.6e-78 296.2 206 68.0
RcHm_v2.0_Chr6g0280561 Rosa chinensis HOM05D006820 ORTHO05D008526 7.6e-78 294.7 206 67.5
FAN27G3410 Fragaria x ananassa HOM05D006820 ORTHO05D008526 9.9e-78 294.3 206 66.5
Hund06169 Selenicereus undatus HOM05D006820 ORTHO05D008526 1.3e-77 293.9 206 67.0
Thhalv10004876m.g Eutrema salsugineum HOM05D006820 ORTHO05D008526 1.7e-77 293.5 208 69.7
TPR.G18648 Trifolium pratense HOM05D006820 ORTHO05D008526 1.7e-77 293.5 210 65.2
AL7G10240 Arabidopsis lyrata HOM05D006820 ORTHO05D008526 3.8e-77 292.4 210 66.7
VMungo0647G2489 Vigna mungo HOM05D006820 ORTHO05D008526 4.9e-77 292.0 206 67.5
AT4G38370 Arabidopsis thaliana HOM05D006820 ORTHO05D008526 1.1e-76 290.8 210 65.7
THA.LOC104804082 Tarenaya hassleriana HOM05D006820 ORTHO05D008526 1.1e-76 290.8 206 66.5
Aa31LG6G16790 Aethionema arabicum HOM05D006820 ORTHO05D008526 2.4e-76 289.7 206 66.5
Sp7g37400 Schrenkiella parvula HOM05D006820 ORTHO05D008526 3.2e-76 289.3 208 67.8
LjContig00081g0000354 Lotus japonicus HOM05D006820 ORTHO05D008526 9.3e-76 287.7 206 66.0
arahy.Tifrunner.gnm1.ann1.6J1J15 Arachis hypogaea HOM05D006820 ORTHO05D008526 2.1e-75 286.6 207 67.1
CsaV3_5G012520 Cucumis sativus L. HOM05D006820 ORTHO05D008526 2.7e-75 286.2 207 67.6
Medtr5g099030 Medicago truncatula HOM05D006820 ORTHO05D008526 3.5e-75 285.8 206 65.0
CDE07G0154 Ceratophyllum demersum HOM05D006820 ORTHO05D008526 1.0e-74 284.3 209 66.0
MD10G1138800 Malus domestica HOM05D006820 ORTHO05D008526 1.3e-74 283.9 207 66.2
unitig_0.g2740 Utricularia gibba HOM05D006820 ORTHO05D008526 1.3e-74 283.9 213 64.3
Lalb_Chr10g0095311 Lupinus albus HOM05D006820 ORTHO05D008526 2.3e-74 283.1 213 65.7
PSO017G7138 Papaver somniferum HOM05D006820 ORTHO05D008526 6.7e-74 281.6 209 65.6
RcHm_v2.0_Chr1g0329291 Rosa chinensis HOM05D006820 ORTHO05D008526 1.5e-73 280.4 207 66.2
arahy.Tifrunner.gnm1.ann1.696HI2 Arachis hypogaea HOM05D006820 ORTHO05D008526 4.3e-73 278.9 207 65.7
ATR0661G540 Amborella trichopoda HOM05D006820 ORTHO05D008526 2.1e-72 276.6 206 65.0
Gohir.A12G033700 Gossypium hirsutum HOM05D006820 ORTHO05D008526 1.8e-71 273.5 207 64.3
FvH4_7g04340 Fragaria vesca HOM05D006820 ORTHO05D008526 1.5e-70 270.4 207 63.3
PSO675G0855 Papaver somniferum HOM05D006820 ORTHO05D008526 1.4e-68 263.8 210 61.0
FAN01G0447 Fragaria x ananassa HOM05D006820 ORTHO05D008526 9.3e-68 261.2 225 58.7
PSO541G2729 Papaver somniferum HOM05D006820 ORTHO05D008526 6.0e-67 258.5 208 61.1
FAN06G4449 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.0e-66 257.7 225 57.8
FAN03G3185 Fragaria x ananassa HOM05D006820 ORTHO05D008526 2.3e-66 256.5 225 57.8
Oeu021963.1 Olea europaea HOM05D006820 ORTHO05D008526 8.7e-66 254.6 207 63.8
Gohir.D12G038800 Gossypium hirsutum HOM05D006820 ORTHO05D008526 7.4e-65 251.5 156 75.6
COL.COLO4_17938 Corchorus olitorius HOM05D006820 ORTHO05D008526 5.9e-62 241.9 156 75.6
SalBow1G3348 Salvia bowleyana HOM05D006820 ORTHO05D008526 2.2e-61 240.0 161 70.2
Dinv41882 Davidia involucrata HOM05D006820 ORTHO05D008526 8.5e-61 238.0 138 81.2
MELO3C022591.2 Cucumis melo HOM05D006820 ORTHO05D008526 2.5e-60 236.5 156 71.8
Zm00001eb088270 Zea mays HOM05D006820 ORTHO05D008526 3.6e-59 232.6 180 59.4
Sed0016165 Sechium edule HOM05D006820 ORTHO05D008526 6.1e-59 231.9 157 68.2
Os04g0224600 Oryza sativa ssp. japonica HOM05D006820 ORTHO05D008526 2.3e-58 229.9 208 54.8
Rhsim05G0047800 Rhododendron simsii HOM05D006820 ORTHO05D008526 2.3e-58 229.9 217 57.6
Pp3c6_22700 Physcomitrium patens HOM05D006820 ORTHO05D008526 6.7e-58 228.4 223 53.8
RhsimUnG0142100 Rhododendron simsii HOM05D006820 ORTHO05D008526 1.9e-57 226.9 217 57.1
Psat2g001280 Pisum sativum HOM05D006820 ORTHO05D008526 2.2e-56 223.4 160 64.4
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 5.3e-55 218.8 215 51.6
AagrBONN_evm.TU.Sc2ySwM_344.5004 Anthoceros agrestis HOM05D006820 ORTHO05D008526 5.3e-55 218.8 215 51.6
ClCG02G009990 Citrullus lanatus HOM05D006820 ORTHO05D008526 5.3e-55 218.8 159 65.4
Mapoly0119s0027 Marchantia polymorpha HOM05D006820 ORTHO05D008526 8.5e-53 211.5 207 52.2
PSO170G2156 Papaver somniferum HOM05D006820 ORTHO05D008526 1.9e-52 210.3 161 64.0
SMO347G0521 Selaginella moellendorffii HOM05D006820 ORTHO05D008526 5.5e-52 208.8 208 53.4
HPP92_025502 Vanilla planifolia HOM05D006820 ORTHO05D008526 1.5e-46 190.7 158 59.5
HPP92_025534 Vanilla planifolia HOM05D006820 ORTHO05D008526 2.2e-45 186.8 157 59.2
C03p77090 Brassica napus HOM05D000564 ORTHO05D002780 8.5e-45 184.9 116 74.1
A08p24230 Brassica napus HOM05D000564 ORTHO05D002780 3.2e-44 183.0 116 73.3
arahy.Tifrunner.gnm1.ann1.MXMJ8X Arachis hypogaea HOM05D006820 ORTHO05D008526 1.4e-42 177.6 143 60.8
CBR_g8644 Chara braunii HOM05D006820 ORTHO05D008526 8.8e-42 174.9 177 51.4
Cc09_g10680 Coffea canephora HOM05D006820 ORTHO05D008526 1.6e-38 164.1 108 71.3
CSS0041656 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 3.6e-35 152.9 105 72.4
Cpa.g.sc20.200 Carica papaya HOM05D006820 ORTHO05D008526 3.7e-32 142.9 111 63.1
MD05G1133800 Malus domestica HOM05D006820 ORTHO05D008526 4.8e-32 142.5 146 54.1
MD10G1042800 Malus domestica HOM05D006820 ORTHO05D008526 2.5e-28 130.2 144 52.1
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 8.8e-26 121.7 174 40.8
arahy.Tifrunner.gnm1.ann1.JU0VI1 Arachis hypogaea HOM05D006820 ORTHO05D008526 1.6e-22 110.9 93 58.1
AUR62010100 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.8e-16 90.1 162 36.4
A09p68760 Brassica napus HOM05D006820 ORTHO05D008526 1.8e-15 87.4 121 38.8
BraA09t42215Z Brassica rapa HOM05D006820 ORTHO05D008526 1.8e-15 87.4 121 38.8
Cc00_g33760 Coffea canephora HOM05D006820 ORTHO05D008526 2.3e-13 80.5 54 70.4
Cc09_g10670 Coffea canephora HOM05D006820 ORTHO05D008526 2.3e-13 80.5 54 70.4
arahy.Tifrunner.gnm1.ann1.E18LML Arachis hypogaea HOM05D006820 ORTHO05D008526 6.8e-10 68.9 47 70.2
Phvul.003G246100 Phaseolus vulgaris HOM05D003180 ORTHO05D003664 4.6e-06 56.2 176 30.1


User provided reference genes

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