Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 2.6e-71 271.9 135 100.0
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 7.0e-61 237.3 130 87.7
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 2.2e-46 189.1 134 70.1
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 3.7e-46 188.3 135 68.9
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 1.1e-45 186.8 137 71.5
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 2.4e-45 185.7 137 69.3
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 9.2e-45 183.7 137 70.1
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 6.0e-44 181.0 135 71.9
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 1.0e-43 180.3 137 66.4
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 1.0e-43 180.3 133 70.7
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 1.3e-43 179.9 137 70.1
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 2.3e-43 179.1 134 70.1
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 2.3e-43 179.1 135 70.4
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 3.9e-43 178.3 137 69.3
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 5.1e-43 177.9 137 69.3
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 5.1e-43 177.9 137 69.3
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 1.9e-42 176.0 132 68.2
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 3.3e-42 175.3 134 67.2
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 1.2e-41 173.3 137 65.7
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 1.2e-41 173.3 137 65.7
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 2.1e-41 172.6 136 65.4
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 2.8e-41 172.2 136 68.4
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 2.8e-41 172.2 136 68.4
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 3.6e-41 171.8 136 65.4
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 6.2e-41 171.0 136 65.4
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 8.1e-41 170.6 136 65.4
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 8.1e-41 170.6 122 68.0
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 1.1e-40 170.2 137 65.7
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 1.4e-40 169.9 137 65.7
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 2.3e-40 169.1 136 62.5
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 2.3e-40 169.1 136 64.7
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 3.1e-40 168.7 136 62.5
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 4.0e-40 168.3 137 65.7
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 4.0e-40 168.3 122 67.2
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 6.8e-40 167.5 137 65.0
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 8.9e-40 167.2 136 65.4
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 8.9e-40 167.2 137 64.2
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 1.2e-39 166.8 136 62.5
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 1.2e-39 166.8 135 65.2
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 1.2e-39 166.8 132 65.9
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 1.5e-39 166.4 136 61.8
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 1.5e-39 166.4 136 62.5
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 2.0e-39 166.0 133 66.9
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 2.6e-39 165.6 132 65.2
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 2.6e-39 165.6 133 62.4
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 3.4e-39 165.2 153 60.8
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 7.6e-39 164.1 137 62.8
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 7.6e-39 164.1 136 64.0
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 7.6e-39 164.1 133 62.4
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 9.9e-39 163.7 136 64.0
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 9.9e-39 163.7 132 62.9
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 1.3e-38 163.3 134 63.4
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.3e-38 163.3 133 60.2
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 1.7e-38 162.9 132 63.6
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 2.2e-38 162.5 132 62.9
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 2.2e-38 162.5 132 62.9
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 2.2e-38 162.5 135 64.4
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 2.2e-38 162.5 135 65.2
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 2.9e-38 162.2 133 60.9
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 3.8e-38 161.8 110 72.7
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 4.9e-38 161.4 135 60.7
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 8.4e-38 160.6 136 59.6
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 8.4e-38 160.6 137 60.6
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 1.4e-37 159.8 132 61.4
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 1.4e-37 159.8 136 60.3
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.4e-37 159.8 135 60.0
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 1.4e-37 159.8 130 64.6
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 1.9e-37 159.5 135 60.7
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.9e-37 159.5 131 65.6
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 2.4e-37 159.1 132 62.1
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 3.2e-37 158.7 132 61.4
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 5.4e-37 157.9 132 60.6
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 5.4e-37 157.9 132 60.6
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 5.4e-37 157.9 137 60.6
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 7.1e-37 157.5 132 59.8
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 7.1e-37 157.5 132 59.8
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 7.1e-37 157.5 132 59.8
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 7.1e-37 157.5 135 60.7
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 9.2e-37 157.1 117 70.9
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 1.6e-36 156.4 132 59.8
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 2.1e-36 156.0 132 60.6
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 7.8e-36 154.1 132 62.1
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 1.7e-35 152.9 132 61.4
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 1.7e-35 152.9 132 61.4
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 3.0e-35 152.1 109 68.8
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 3.9e-35 151.8 103 73.8
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 3.9e-35 151.8 133 57.9
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 6.6e-35 151.0 106 71.7
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 6.6e-35 151.0 126 64.3
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 1.1e-34 150.2 92 84.8
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 7.3e-34 147.5 135 57.0
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 1.6e-33 146.4 104 69.2
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 4.7e-33 144.8 158 51.9
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 8.1e-33 144.1 110 67.3
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 8.1e-33 144.1 108 66.7
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 1.4e-32 143.3 101 69.3
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 1.8e-32 142.9 110 68.2
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 7.6e-31 137.5 103 70.9
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 1.3e-30 136.7 110 62.7
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 6.4e-30 134.4 114 61.4
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 1.6e-28 129.8 106 63.2
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 1.3e-25 120.2 90 71.1
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 1.8e-24 116.3 111 53.2
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 2.2e-22 109.4 197 41.1
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.6e-20 103.2 105 53.3
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 4.6e-12 75.1 50 70.0
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 7.9e-12 74.3 121 33.9
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 8.4e-06 54.3 53 54.7


User provided reference genes

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