Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1682 Erigeron canadensis HOM05D001447 ORTHO05D005923 2.8e-163 578.6 298 100.0
ECA234G3051 Erigeron canadensis HOM05D001447 ORTHO05D005923 2.4e-146 522.3 283 95.1
Lsat_1_v5_gn_2_28360 Lactuca sativa HOM05D001447 ORTHO05D005923 7.9e-81 304.7 303 54.8
HanXRQChr14g0441711 Helianthus annuus HOM05D001447 ORTHO05D005923 2.9e-75 286.2 298 55.7
GSVIVG01031554001 Vitis vinifera HOM05D001447 ORTHO05D005923 2.1e-57 226.9 315 43.8
Dinv36208 Davidia involucrata HOM05D001447 ORTHO05D005923 1.4e-56 224.2 308 44.8
Gohir.A09G111500 Gossypium hirsutum HOM05D001447 ORTHO05D005923 6.7e-56 221.9 311 44.1
CiPaw.13G153600 Carya illinoinensis HOM05D001447 ORTHO05D005923 5.7e-55 218.8 301 41.5
Gohir.D09G108100 Gossypium hirsutum HOM05D001447 ORTHO05D005923 9.7e-55 218.0 311 45.0
Gorai.006G125800 Gossypium raimondii HOM05D001447 ORTHO05D005923 1.3e-54 217.6 311 43.7
CANSAT54G2333 Cannabis sativa HOM05D001447 ORTHO05D005923 1.7e-54 217.2 317 43.2
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.8e-54 216.5 313 43.8
Manes.09G003800 Manihot esculenta HOM05D001447 ORTHO05D005923 6.3e-54 215.3 311 41.2
Cpa.g.sc84.6 Carica papaya HOM05D001447 ORTHO05D005923 1.4e-53 214.2 309 42.1
MSTRG.11555 Avicennia marina HOM05D001447 ORTHO05D005923 3.1e-53 213.0 309 41.1
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 4.1e-53 212.6 313 43.8
Manes.06G161200 Manihot esculenta HOM05D001447 ORTHO05D005923 4.1e-53 212.6 312 41.7
Oeu038401.1 Olea europaea HOM05D001447 ORTHO05D005923 1.2e-52 211.1 310 41.0
Nn2g15058 Nelumbo nucifera HOM05D001447 ORTHO05D005923 1.6e-52 210.7 316 41.1
RcHm_v2.0_Chr5g0051191 Rosa chinensis HOM05D001447 ORTHO05D005923 2.0e-52 210.3 321 42.1
Thecc.09G241000 Theobroma cacao HOM05D001447 ORTHO05D005923 2.0e-52 210.3 311 42.4
TWI14G1124 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 2.7e-52 209.9 331 41.1
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 4.5e-52 209.1 310 41.6
Prupe.4G257000 Prunus persica HOM05D001447 ORTHO05D005923 4.5e-52 209.1 315 43.5
Sopen02g030930 Solanum pennellii HOM05D001447 ORTHO05D005923 5.9e-52 208.8 307 41.7
TWI23G0345 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 5.9e-52 208.8 324 40.7
CAN.G625.44 Capsicum annuum HOM05D001447 ORTHO05D005923 3.8e-51 206.1 308 40.3
HanXRQChr04g0117031 Helianthus annuus HOM05D001447 ORTHO05D005923 3.8e-51 206.1 240 51.7
Solyc02g086250.4 Solanum lycopersicum HOM05D001447 ORTHO05D005923 1.1e-50 204.5 309 41.7
Cc01_g06480 Coffea canephora HOM05D001447 ORTHO05D005923 1.9e-50 203.8 312 42.0
Gorai.009G074300 Gossypium raimondii HOM05D001447 ORTHO05D005923 3.2e-50 203.0 313 42.2
AUR62000166 Chenopodium quinoa HOM05D001447 ORTHO05D005923 2.7e-49 199.9 312 39.1
TAR623G1061 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.4e-48 197.6 299 42.5
PGR119G0225 Punica granatum HOM05D001447 ORTHO05D005923 2.3e-48 196.8 306 41.2
Gohir.D05G073400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 3.0e-48 196.4 299 42.8
PSO384G1304 Papaver somniferum HOM05D001447 ORTHO05D005923 3.0e-48 196.4 314 39.2
COL.COLO4_36479 Corchorus olitorius HOM05D001447 ORTHO05D005923 2.0e-47 193.7 284 41.5
FvH4_3g28310 Fragaria vesca HOM05D001447 ORTHO05D005923 2.0e-47 193.7 320 40.9
FAN11G3154 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.0e-47 193.7 320 40.9
CARHR095600 Cardamine hirsuta HOM05D001447 ORTHO05D005923 3.4e-47 193.0 304 42.8
Nitab4.5_0003652g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005923 9.8e-47 191.4 314 41.4
FAN16G0976 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.7e-46 190.7 315 38.4
Haze_23187 Corylus avellana HOM05D001447 ORTHO05D005923 2.2e-46 190.3 305 42.0
Eucgr.J00732 Eucalyptus grandis HOM05D001447 ORTHO05D005923 2.8e-46 189.9 322 42.2
Duzib168G0657 Durio zibethinus HOM05D001447 ORTHO05D005923 4.8e-46 189.1 292 42.5
AUR62039845 Chenopodium quinoa HOM05D001447 ORTHO05D005923 8.3e-46 188.3 325 37.2
Aa31LG8G6860 Aethionema arabicum HOM05D001447 ORTHO05D005923 1.1e-45 188.0 298 40.6
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 1.1e-45 188.0 314 37.3
PSO339G5991 Papaver somniferum HOM05D001447 ORTHO05D005923 1.8e-45 187.2 315 38.1
Hma1.2p1_1503F.1_g287490 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 9.1e-45 184.9 298 39.6
Hund21995 Selenicereus undatus HOM05D001447 ORTHO05D005923 1.6e-44 184.1 332 38.3
Glyma.18G222500 Glycine max HOM05D001447 ORTHO05D005923 3.5e-44 183.0 308 37.3
THA.LOC104811411 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 3.5e-44 183.0 299 41.1
AL3G33750 Arabidopsis lyrata HOM05D001447 ORTHO05D005923 4.5e-44 182.6 312 40.1
Migut.O00259 Erythranthe guttata HOM05D001447 ORTHO05D005923 4.5e-44 182.6 299 38.5
MD11G1187600 Malus domestica HOM05D001447 ORTHO05D005923 4.5e-44 182.6 302 39.1
Ah.06g193790 Amaranthus hybridus HOM05D001447 ORTHO05D005923 7.7e-44 181.8 309 38.2
MBI13_g04766_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D005923 1.0e-43 181.4 307 38.1
FAN21G0933 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.3e-43 181.0 326 35.9
MD03G1170100 Malus domestica HOM05D001447 ORTHO05D005923 1.3e-43 181.0 310 38.1
LjContig00136g0008106 Lotus japonicus HOM05D001447 ORTHO05D005923 1.7e-43 180.6 305 38.4
Sp3g18100 Schrenkiella parvula HOM05D001447 ORTHO05D005923 2.9e-43 179.9 305 41.3
CSS0020855 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005923 6.5e-43 178.7 313 39.3
PSO170G2976 Papaver somniferum HOM05D001447 ORTHO05D005923 6.5e-43 178.7 314 37.6
MELO3C014572.2 Cucumis melo HOM05D001447 ORTHO05D005923 8.5e-43 178.3 319 37.3
THA.LOC104809267 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 8.5e-43 178.3 304 39.1
Gohir.A05G070400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 2.5e-42 176.8 304 40.8
VMungo1383G2912 Vigna mungo HOM05D001447 ORTHO05D005923 2.5e-42 176.8 309 37.9
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 3.2e-42 176.4 313 36.1
FAN25G1867 Fragaria x ananassa HOM05D001447 ORTHO05D005923 3.2e-42 176.4 319 36.1
Medtr7g075050 Medicago truncatula HOM05D001447 ORTHO05D005923 5.5e-42 175.6 302 37.7
Potri.009G049500 Populus trichocarpa HOM05D001447 ORTHO05D005923 7.2e-42 175.3 317 36.9
Glyma.13G152406 Glycine max HOM05D001447 ORTHO05D005923 9.5e-42 174.9 304 35.5
Medtr8g059560 Medicago truncatula HOM05D001447 ORTHO05D005923 1.2e-41 174.5 302 37.7
Peaxi162Scf00394g00910 Petunia axillaris HOM05D001447 ORTHO05D005923 2.1e-41 173.7 276 40.2
Phvul.008G074800 Phaseolus vulgaris HOM05D001447 ORTHO05D005923 6.1e-41 172.2 310 36.1
Nitab4.5_0000753g0110 Nicotiana tabacum HOM05D001447 ORTHO05D005923 8.0e-41 171.8 310 37.4
Glyma.10G069400 Glycine max HOM05D001447 ORTHO05D005923 1.8e-40 170.6 304 36.8
Glyma.09G267400 Glycine max HOM05D001447 ORTHO05D005923 2.3e-40 170.2 308 36.7
SalBow4G0828 Salvia bowleyana HOM05D001447 ORTHO05D005923 2.3e-40 170.2 366 34.2
Lalb_Chr17g0336631 Lupinus albus HOM05D001447 ORTHO05D005923 4.0e-40 169.5 328 35.7
Sc09g0000900 Simmondsia chinensis HOM05D001447 ORTHO05D005923 6.8e-40 168.7 302 38.7
Atru.chr3.2630 Acer truncatum HOM05D001447 ORTHO05D005923 8.8e-40 168.3 350 34.6
Actinidia16355 Actinidia chinensis HOM05D001447 ORTHO05D005923 8.8e-40 168.3 372 35.5
Carub.0003s1999 Capsella rubella HOM05D001447 ORTHO05D005923 3.4e-39 166.4 304 38.5
EL10Ac4g10184 Beta vulgaris HOM05D001447 ORTHO05D005923 5.7e-39 165.6 290 37.2
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 1.7e-38 164.1 308 35.1
TPR.G26927 Trifolium pratense HOM05D001447 ORTHO05D005923 2.2e-38 163.7 300 35.7
Thhalv10021184m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 3.7e-38 162.9 329 37.4
arahy.Tifrunner.gnm1.ann1.QJKL08 Arachis hypogaea HOM05D001447 ORTHO05D005923 8.3e-38 161.8 307 36.2
Rhsim13G0217200 Rhododendron simsii HOM05D001447 ORTHO05D005923 1.1e-37 161.4 347 35.4
arahy.Tifrunner.gnm1.ann1.Q3UL2U Arachis hypogaea HOM05D001447 ORTHO05D005923 7.0e-37 158.7 307 35.8
BcaC05g28363 Brassica carinata HOM05D001447 ORTHO05D005923 1.6e-36 157.5 301 40.5
BcaB06g26078 Brassica carinata HOM05D001447 ORTHO05D005923 2.7e-36 156.8 304 36.5
vmacro10456 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 4.5e-36 156.0 325 36.6
Hma1.2p1_1116F.1_g258880 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 7.7e-36 155.2 282 34.8
C05p44410 Brassica napus HOM05D001447 ORTHO05D005923 1.7e-35 154.1 298 38.3
BolC5t33164H Brassica oleracea HOM05D001447 ORTHO05D005923 1.7e-35 154.1 298 38.3
Lalb_Chr20g0108071 Lupinus albus HOM05D001447 ORTHO05D005923 3.3e-34 149.8 337 34.1
PSO210G7517 Papaver somniferum HOM05D001447 ORTHO05D005923 5.6e-34 149.1 316 34.8
BraA05t21783Z Brassica rapa HOM05D001447 ORTHO05D005923 1.6e-33 147.5 298 37.2
VMungo0540G1247 Vigna mungo HOM05D001447 ORTHO05D003921 6.1e-33 145.6 316 35.1
Aqoxy2G00276 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 2.0e-31 140.6 314 34.4
AT3G20070 Arabidopsis thaliana HOM05D001447 ORTHO05D005923 2.0e-31 140.6 305 36.1
Lj2A623T26 Lonicera japonica HOM05D001447 ORTHO05D005923 7.5e-31 138.7 222 41.4
vmacro04118 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 3.7e-30 136.3 408 29.9
Psat3g114240 Pisum sativum HOM05D001447 ORTHO05D005923 4.9e-30 136.0 302 32.8
DCAR_002089 Daucus carota HOM05D001447 ORTHO05D005923 8.3e-30 135.2 221 38.5
A05p29010 Brassica napus HOM05D001447 ORTHO05D005923 1.1e-29 134.8 321 34.9
TAR623G1057 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.1e-29 134.8 231 41.6
Sed0027916 Sechium edule HOM05D001447 ORTHO05D005923 4.1e-29 132.9 314 30.6
ATR0681G241 Amborella trichopoda HOM05D001447 ORTHO05D005923 5.4e-29 132.5 322 32.3
HPP92_015725 Vanilla planifolia HOM05D001447 ORTHO05D005923 1.0e-27 128.3 298 33.2
Lj5A793G14 Lonicera japonica HOM05D001447 ORTHO05D005923 8.6e-27 125.2 228 39.0
Ciclev10006845m.g Citrus clementina HOM05D001447 ORTHO05D005923 3.4e-23 113.2 298 32.9
TAR623G0977 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.2e-21 106.7 232 36.6
Aqoxy2G00275 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 7.8e-20 102.1 314 30.6
SGA_v2.0_scaffold25G10748 Striga asiatica HOM05D001447 ORTHO05D005923 7.8e-20 102.1 221 33.9
Os06g0245600 Oryza sativa ssp. japonica HOM05D001447 ORTHO05D005923 1.0e-19 101.7 262 30.2
QL01p018064 Quercus lobata HOM05D001447 ORTHO05D005923 1.7e-19 100.9 220 35.5
SEGI_06958 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 2.5e-18 97.1 342 25.7
TAR622G0649 Trochodendron aralioides HOM05D000050 ORTHO05D000654 9.5e-18 95.1 294 26.9
unitig_8.g3773 Utricularia gibba HOM05D001447 ORTHO05D005923 1.6e-17 94.4 93 52.7
TAR623G1702 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.8e-17 93.6 228 35.5
Ca_07826_v3 Cicer arietinum L. HOM05D001447 ORTHO05D005923 4.0e-16 89.7 239 31.8
SHI27451 Sapria himalayana HOM05D001447 ORTHO05D000654 8.9e-16 88.6 101 46.5
QL01p018054 Quercus lobata HOM05D001447 ORTHO05D005923 3.2e-13 80.1 70 57.1
BcaB01g01441 Brassica carinata HOM05D001447 ORTHO05D005923 2.7e-12 77.0 228 30.7
Zm00001eb128570 Zea mays HOM05D001447 ORTHO05D005923 6.0e-12 75.9 312 24.7
CDE02G0596 Ceratophyllum demersum HOM05D001447 ORTHO05D005923 1.3e-11 74.7 133 29.3
Aa31LG7G13510 Aethionema arabicum HOM05D001447 ORTHO05D005923 5.1e-11 72.8 150 35.3
TAR623G0319 Trochodendron aralioides HOM05D001447 ORTHO05D005923 6.6e-11 72.4 214 31.8
Mapoly0019s0119 Marchantia polymorpha HOM05D001447 ORTHO05D005923 2.5e-10 70.5 319 26.3
BcaB02g07197 Brassica carinata HOM05D001447 ORTHO05D005923 1.4e-08 64.7 91 42.9
VMungo1383G3216 Vigna mungo HOM05D001447 ORTHO05D010195 1.8e-08 64.3 102 34.3
Thhalv10023995m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 2.6e-07 60.5 117 31.6
HanXRQChr02g0059211 Helianthus annuus HOM05D001447 ORTHO05D005923 2.6e-07 60.5 70 50.0
VMungo1383G1695 Vigna mungo HOM05D001447 ORTHO05D005923 2.6e-07 60.5 101 32.7
TAR623G0653 Trochodendron aralioides HOM05D001447 ORTHO05D005923 5.8e-07 59.3 42 64.3
BolC4t26880H Brassica oleracea HOM05D001447 ORTHO05D005923 9.9e-07 58.5 246 29.3
SEGI_16617 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 1.3e-06 58.2 62 41.9
FvH4_7g24870 Fragaria vesca HOM05D021264 ORTHO05D022594 2.2e-06 57.4 81 33.3
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 8.4e-06 55.5 94 31.9


User provided reference genes

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