Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1512 Erigeron canadensis HOM05D021928 ORTHO05D015640 6.7e-119 430.6 210 100.0
ECA233G0974 Erigeron canadensis HOM05D021928 ORTHO05D015640 1.3e-82 310.1 212 75.0
ECA233G2435 Erigeron canadensis HOM05D021928 ORTHO05D015640 5.1e-74 281.6 214 68.7
ECA233G2609 Erigeron canadensis HOM05D021928 ORTHO05D015640 5.4e-60 235.0 217 60.4
ECA233G1519 Erigeron canadensis HOM05D021928 ORTHO05D015640 8.7e-26 121.3 109 58.7
Lsat_1_v5_gn_8_18560 Lactuca sativa HOM05D000535 ORTHO05D015640 5.7e-17 92.0 190 29.5
Lju170C19T1 Lonicera japonica HOM05D000535 ORTHO05D000427 6.3e-16 88.6 203 31.5
Lju170C20T6 Lonicera japonica HOM05D000535 ORTHO05D000427 6.3e-16 88.6 203 31.0
Lju170C19T0 Lonicera japonica HOM05D000535 ORTHO05D000427 8.2e-16 88.2 207 30.9
ECA233G0242 Erigeron canadensis HOM05D000535 ORTHO05D015640 1.8e-15 87.0 185 32.4
TWI12G0051 Tripterygium wilfordii HOM05D000535 ORTHO05D000427 6.9e-15 85.1 208 31.7
HanXRQChr05g0158931 Helianthus annuus HOM05D000535 ORTHO05D015640 1.2e-14 84.3 176 30.7
Duzib128G0529 Durio zibethinus HOM05D000535 ORTHO05D000427 2.0e-14 83.6 175 33.7
Lju170C18T0 Lonicera japonica HOM05D000535 ORTHO05D000427 2.6e-14 83.2 207 30.0
FAN08G0118 Fragaria x ananassa HOM05D000535 ORTHO05D000427 4.5e-14 82.4 180 32.8
Lju170C17T0 Lonicera japonica HOM05D000535 ORTHO05D000427 4.5e-14 82.4 207 31.4
COL.COLO4_08721 Corchorus olitorius HOM05D000535 ORTHO05D000427 5.9e-14 82.0 208 31.2
ECA238G2553 Erigeron canadensis HOM05D018717 ORTHO05D025304 5.9e-14 82.0 217 29.0
FAN04G0905 Fragaria x ananassa HOM05D002264 ORTHO05D002413 1.0e-13 81.3 165 32.7
HanXRQChr05g0158941 Helianthus annuus HOM05D000535 ORTHO05D015640 1.7e-13 80.5 175 28.6
HanXRQChr17g0538161 Helianthus annuus HOM05D000535 ORTHO05D015640 1.7e-13 80.5 202 27.7
MBI06_g27485_MAGBIO Magnolia biondii HOM05D000535 ORTHO05D000427 3.8e-13 79.3 198 31.3
Sc14g0008220 Simmondsia chinensis HOM05D000535 ORTHO05D000427 3.8e-13 79.3 181 30.4
TAR629G0176 Trochodendron aralioides HOM05D000535 ORTHO05D000427 3.8e-13 79.3 199 29.1
Atru.chr10.1154 Acer truncatum HOM05D000535 ORTHO05D000427 5.0e-13 79.0 216 31.5
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 6.5e-13 78.6 178 32.6
TWI15G0556 Tripterygium wilfordii HOM05D000535 ORTHO05D000427 6.5e-13 78.6 208 30.3
Atru.chr10.1140 Acer truncatum HOM05D000535 ORTHO05D000427 8.5e-13 78.2 195 31.3
Atru.chr10.1153 Acer truncatum HOM05D000535 ORTHO05D000427 8.5e-13 78.2 195 31.3
Duzib128G1043 Durio zibethinus HOM05D000535 ORTHO05D000427 8.5e-13 78.2 196 29.6
GSVIVG01012920001 Vitis vinifera HOM05D000535 ORTHO05D000427 8.5e-13 78.2 163 35.0
FAN13G2343 Fragaria x ananassa HOM05D000535 ORTHO05D000427 1.1e-12 77.8 181 31.5
Lsat_1_v5_gn_8_18580 Lactuca sativa HOM05D002256 ORTHO05D015640 1.1e-12 77.8 212 25.9
Gohir.A05G392000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.9e-12 77.0 200 32.0
Gohir.D04G025100 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.9e-12 77.0 200 31.5
Gorai.012G027700 Gossypium raimondii HOM05D000535 ORTHO05D000427 1.9e-12 77.0 200 31.5
Lju170C15T10 Lonicera japonica HOM05D000535 ORTHO05D000427 1.9e-12 77.0 203 31.5
TWI15G1241 Tripterygium wilfordii HOM05D000535 ORTHO05D000427 2.5e-12 76.6 178 30.3
FvH4_5g18500 Fragaria vesca HOM05D000535 ORTHO05D000427 4.2e-12 75.9 180 31.1
Thecc.05G198000 Theobroma cacao HOM05D000535 ORTHO05D000427 5.5e-12 75.5 175 31.4
vmacro18605 Vaccinium macrocarpon HOM05D000535 ORTHO05D000427 5.5e-12 75.5 187 29.9
FAN18G1447 Fragaria x ananassa HOM05D002264 ORTHO05D000427 7.2e-12 75.1 180 31.1
FvH4_5g18510 Fragaria vesca HOM05D000535 ORTHO05D000427 9.4e-12 74.7 179 31.3
FAN13G1742 Fragaria x ananassa HOM05D000535 ORTHO05D000427 9.4e-12 74.7 180 31.7
Lj9C411T7 Lonicera japonica HOM05D000535 ORTHO05D000427 1.6e-11 73.9 201 29.4
ECA233G4337 Erigeron canadensis HOM05D000535 ORTHO05D015640 2.7e-11 73.2 215 25.6
Thecc.05G197900 Theobroma cacao HOM05D000535 ORTHO05D000427 2.7e-11 73.2 197 28.4
Sopen03g029440 Solanum pennellii HOM05D000535 ORTHO05D000427 1.1e-09 67.8 195 27.7
Cc04_g08330 Coffea canephora HOM05D000535 ORTHO05D000427 3.3e-09 66.2 206 25.7
Solyc03g098730.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 1.3e-08 64.3 197 28.4
Lj2P607T10 Lonicera japonica HOM05D000535 ORTHO05D000427 1.7e-08 63.9 216 28.7
Cc00_g31050 Coffea canephora HOM05D000535 ORTHO05D000427 2.8e-08 63.2 210 28.6
Nitab4.5_0003040g0010 Nicotiana tabacum HOM05D000535 ORTHO05D000427 3.7e-08 62.8 154 28.6
Cc10_g11700 Coffea canephora HOM05D000535 ORTHO05D000427 6.3e-08 62.0 187 28.9
Lj2g0022912 Lotus japonicus HOM05D000535 ORTHO05D000427 8.2e-08 61.6 186 27.4
Sabra19G0131400 Salix brachista HOM05D010192 ORTHO05D012386 8.2e-08 61.6 186 28.5
Hma1.2p1_0460F.1_g157635 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 1.8e-07 60.5 183 27.3
Cc00_g30520 Coffea canephora HOM05D000535 ORTHO05D000427 2.4e-07 60.1 215 27.9
PGSC0003DMG400010132 Solanum tuberosum HOM05D000535 ORTHO05D000427 2.4e-07 60.1 178 26.4
Sabra19G0123000 Salix brachista HOM05D010192 ORTHO05D012386 3.1e-07 59.7 186 28.0
Lalb_Chr03g0031361 Lupinus albus HOM05D000535 ORTHO05D000427 4.1e-07 59.3 170 28.8
CSS0038674 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 7.0e-07 58.5 159 30.2
Cc10_g11720 Coffea canephora HOM05D000535 ORTHO05D000427 7.0e-07 58.5 214 28.0
Sabra19G0123100 Salix brachista HOM05D010192 ORTHO05D012386 7.0e-07 58.5 186 26.9
Dinv10707 Davidia involucrata HOM05D000535 ORTHO05D000427 1.5e-06 57.4 199 28.1
Dinv10703 Davidia involucrata HOM05D000535 ORTHO05D000427 2.6e-06 56.6 184 27.2


User provided reference genes

Program Settings