Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 7.4e-163 577.0 266 100.0
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 3.6e-109 398.7 273 71.4
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 1.5e-99 366.7 272 65.8
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 1.5e-91 340.1 274 61.7
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 8.3e-90 334.3 274 58.8
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 1.1e-89 334.0 253 62.1
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 1.1e-89 334.0 274 60.2
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 1.6e-88 330.1 274 58.8
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 6.0e-88 328.2 275 58.9
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 7.8e-88 327.8 275 60.0
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 7.8e-88 327.8 276 57.2
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 1.0e-87 327.4 275 59.6
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.0e-87 327.4 273 58.6
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 1.3e-87 327.0 269 58.7
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 1.7e-87 326.6 274 58.0
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 1.7e-87 326.6 274 60.2
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.3e-87 326.2 273 58.2
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 3.9e-87 325.5 275 58.9
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 3.9e-87 325.5 276 58.7
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.9e-87 325.5 274 59.1
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 5.0e-87 325.1 273 59.0
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 6.6e-87 324.7 274 59.5
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 6.6e-87 324.7 275 60.0
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 1.1e-86 323.9 273 58.2
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 1.9e-86 323.2 274 58.4
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 2.5e-86 322.8 269 58.4
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 3.3e-86 322.4 269 58.7
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 3.3e-86 322.4 273 58.2
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 5.6e-86 321.6 274 58.8
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 7.3e-86 321.2 274 58.0
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 9.5e-86 320.9 267 58.1
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 9.5e-86 320.9 273 58.2
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 1.2e-85 320.5 273 58.2
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 1.2e-85 320.5 274 59.9
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 1.6e-85 320.1 274 58.0
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 2.8e-85 319.3 274 57.7
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 3.6e-85 318.9 276 57.6
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 4.7e-85 318.5 277 56.0
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 8.1e-85 317.8 274 58.4
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 1.4e-84 317.0 274 58.0
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 1.8e-84 316.6 274 56.6
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 1.8e-84 316.6 274 57.7
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 1.8e-84 316.6 274 56.2
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.3e-84 316.2 277 57.4
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 2.3e-84 316.2 277 57.4
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 4.0e-84 315.5 277 55.6
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 5.2e-84 315.1 276 55.8
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 6.8e-84 314.7 274 57.3
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 6.8e-84 314.7 269 57.6
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 8.9e-84 314.3 276 56.9
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 8.9e-84 314.3 276 56.9
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 2.0e-83 313.2 274 58.0
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 2.6e-83 312.8 269 57.2
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 2.6e-83 312.8 274 56.9
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 2.6e-83 312.8 274 56.6
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 4.4e-83 312.0 274 56.2
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 5.8e-83 311.6 277 55.2
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 5.8e-83 311.6 267 55.4
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 5.8e-83 311.6 260 57.7
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 5.8e-83 311.6 271 55.4
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 7.5e-83 311.2 261 59.4
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 9.9e-83 310.8 274 56.2
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 9.9e-83 310.8 267 55.4
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 9.9e-83 310.8 261 59.0
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.3e-82 310.5 274 56.9
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 1.3e-82 310.5 261 61.3
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 1.7e-82 310.1 274 56.6
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.2e-82 309.7 267 56.6
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 2.9e-82 309.3 270 56.7
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 3.7e-82 308.9 268 57.5
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 4.9e-82 308.5 274 53.6
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 6.4e-82 308.1 273 55.7
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 6.4e-82 308.1 277 55.2
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 1.9e-81 306.6 272 55.9
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.4e-81 306.2 270 57.0
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.4e-81 306.2 270 55.9
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 2.4e-81 306.2 269 56.1
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 4.1e-81 305.4 274 56.2
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 4.1e-81 305.4 270 58.1
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 5.4e-81 305.1 275 56.0
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 7.1e-81 304.7 277 55.6
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 7.1e-81 304.7 264 57.6
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 7.1e-81 304.7 267 54.3
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 9.2e-81 304.3 275 55.3
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 9.2e-81 304.3 272 55.5
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 1.2e-80 303.9 274 54.7
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.2e-80 303.9 269 55.0
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 1.2e-80 303.9 262 57.3
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 1.6e-80 303.5 272 55.1
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 2.1e-80 303.1 265 54.7
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.5e-80 302.4 275 55.6
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 4.6e-80 302.0 274 56.6
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 4.6e-80 302.0 261 58.6
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 4.6e-80 302.0 263 56.7
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 6.0e-80 301.6 273 54.2
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 6.0e-80 301.6 270 56.7
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 6.0e-80 301.6 262 57.3
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 7.8e-80 301.2 267 54.3
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 7.8e-80 301.2 267 55.8
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 1.7e-79 300.1 265 54.3
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.7e-79 300.1 267 53.2
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.7e-79 300.1 255 56.5
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 2.3e-79 299.7 274 56.2
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 3.9e-79 298.9 261 59.8
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 3.9e-79 298.9 286 53.1
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 6.6e-79 298.1 267 53.2
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 8.6e-79 297.7 267 55.1
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 1.1e-78 297.4 274 55.1
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 1.9e-78 296.6 268 56.0
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 2.5e-78 296.2 265 54.0
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 2.5e-78 296.2 265 54.0
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 2.5e-78 296.2 267 53.9
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 3.3e-78 295.8 265 53.6
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 4.3e-78 295.4 274 52.2
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 7.3e-78 294.7 267 52.8
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 9.5e-78 294.3 268 55.2
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 2.8e-77 292.7 265 54.0
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 4.7e-77 292.0 267 52.4
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.2e-77 291.6 265 53.6
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 8.1e-77 291.2 266 54.1
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 8.1e-77 291.2 264 53.4
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 2.4e-76 289.7 274 51.1
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 6.8e-76 288.1 266 54.1
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 1.5e-75 287.0 260 52.3
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 3.4e-75 285.8 206 63.1
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.8e-74 282.3 244 55.3
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.1e-73 280.8 246 55.3
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 3.0e-71 272.7 256 52.7
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 3.3e-70 269.2 265 50.6
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 8.1e-69 264.6 265 49.4
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 4.0e-68 262.3 146 78.1
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 4.4e-67 258.8 260 46.5
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 2.4e-65 253.1 275 47.3
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 7.1e-65 251.5 255 49.8
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 6.0e-64 248.4 267 45.7
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 8.7e-63 244.6 260 45.8
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 6.2e-61 238.4 258 45.7
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 1.7e-58 230.3 158 62.7
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.4e-57 226.5 277 46.9
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 2.4e-57 226.5 277 46.9
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 3.9e-55 219.2 253 47.0
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 7.1e-49 198.4 185 56.8
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 7.1e-49 198.4 234 44.4
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 2.3e-47 193.4 259 39.0
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 5.1e-47 192.2 273 42.1
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.9e-33 147.1 140 50.7
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 1.7e-26 124.0 299 29.1
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 5.0e-26 122.5 265 32.1
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 5.5e-25 119.0 75 64.0
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 2.4e-20 103.6 231 31.6
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 8.5e-18 95.1 100 52.0
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.0e-15 88.2 131 42.7
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 2.0e-14 84.0 288 25.3
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 7.0e-12 75.5 74 51.4
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 2.7e-08 63.5 92 37.0


User provided reference genes

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